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Iain Clark, PhD

TitlePostdoctoral Scholar
SchoolUCSF School of Pharmacy
DepartmentBioengineering
Address1700 4th Street
San Francisco CA 94158
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    UC BerkeleyPhD2015CEE

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Clark IC, Abate AR. Finding a helix in a haystack: nucleic acid cytometry with droplet microfluidics. Lab Chip. 2017 Jun 13; 17(12):2032-2045. PMID: 28540956.
      View in: PubMed
    2. Youngblut MD, Tsai CL, Clark IC, Carlson HK, Maglaqui AP, Gau-Pan PS, Redford SA, Wong A, Tainer JA, Coates JD. Perchlorate Reductase Is Distinguished by Active Site Aromatic Gate Residues. J Biol Chem. 2016 Apr 22; 291(17):9190-202. PMID: 26940877; PMCID: PMC4861485 [Available on 04/22/17].
    3. Clark I, Youngblut M, Jacobsen G, Wetmore KM, Deutschbauer A, Lucas L, Coates JD. Genetic dissection of chlorate respiration in Pseudomonas stutzeri PDA reveals syntrophic (per)chlorate reduction. Environ Microbiol. 2016 Oct; 18(10):3342-3354. PMID: 26411776.
      View in: PubMed
    4. Clark IC, Melnyk RA, Youngblut MD, Carlson HK, Iavarone AT, Coates JD. Synthetic and Evolutionary Construction of a Chlorate-Reducing Shewanella oneidensis MR-1. MBio. 2015 May 19; 6(3):e00282-15. PMID: 25991681; PMCID: PMC4442138.
    5. Melnyk RA, Youngblut MD, Clark IC, Carlson HK, Wetmore KM, Price MN, Iavarone AT, Deutschbauer AM, Arkin AP, Coates JD. Novel mechanism for scavenging of hypochlorite involving a periplasmic methionine-rich Peptide and methionine sulfoxide reductase. MBio. 2015 May 12; 6(3):e00233-15. PMID: 25968643; PMCID: PMC4436054.
    6. Carlström CI, Loutey D, Bauer S, Clark IC, Rohde RA, Iavarone AT, Lucas L, Coates JD. (Per)chlorate-reducing bacteria can utilize aerobic and anaerobic pathways of aromatic degradation with (per)chlorate as an electron acceptor. MBio. 2015 Mar 24; 6(2). PMID: 25805732; PMCID: PMC4453571.
    7. Clark IC, Melnyk RA, Iavarone AT, Novichkov PS, Coates JD. Chlorate reduction in Shewanella algae ACDC is a recently acquired metabolism characterized by gene loss, suboptimal regulation and oxidative stress. Mol Microbiol. 2014 Oct; 94(1):107-25. PMID: 25099177.
      View in: PubMed
    8. Melnyk RA, Clark IC, Liao A, Coates JD. Transposon and deletion mutagenesis of genes involved in perchlorate reduction in Azospira suillum PS. MBio. 2013 Dec 31; 5(1):e00769-13. PMID: 24381299; PMCID: PMC3884062.
    9. Clark IC, Melnyk RA, Engelbrektson A, Coates JD. Structure and evolution of chlorate reduction composite transposons. MBio. 2013 Aug 06; 4(4). PMID: 23919996; PMCID: PMC3735179.
    10. Carlson HK, Clark IC, Blazewicz SJ, Iavarone AT, Coates JD. Fe(II) oxidation is an innate capability of nitrate-reducing bacteria that involves abiotic and biotic reactions. J Bacteriol. 2013 Jul; 195(14):3260-8. PMID: 23687275; PMCID: PMC3697641.
    11. Clark I, Carlson HK, Iavarone AT, and John D. Coates. Bioelectrical redox cycling of anthraquinone-2,6-disulfonate coupled to perchlorate reduction. Energy & Environmental Science. 2012; 5:7970-7978.
    12. Clark I, Zhang RH, and Upadhyaya SK. The effect of low pressure and mixing on biological hydrogen production via anaerobic fermentation. International Journal of Hydrogen Energy. 2012; 37: 11504-11513.
    13. Carlson HK, Clark IC, Melnyk RA, Coates JD. Toward a mechanistic understanding of anaerobic nitrate-dependent iron oxidation: balancing electron uptake and detoxification. Front Microbiol. 2012; 3:57. PMID: 22363331; PMCID: PMC3282478.
    14. Melnyk RA, Engelbrektson A, Clark IC, Carlson HK, Byrne-Bailey K, Coates JD. Identification of a perchlorate reduction genomic island with novel regulatory and metabolic genes. Appl Environ Microbiol. 2011 Oct; 77(20):7401-4. PMID: 21856823; PMCID: PMC3194888.
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