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    Matthew Zapala, MD

    TitleAssistant Professor
    SchoolUCSF School of Medicine
    Address550 16th. Street
    San Francisco CA 94158
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      Collapse Biography 
      Collapse Awards and Honors
      Boston Children’s Hospital2015Pediatric Radiology Fellow Teaching Award
      University of California, San Diego 2009Gold Humanism Honor Society
      University of California, San Diego2009Merck Academic Achievement
      Stanford University1998Departmental Research Honors

      Collapse Overview 
      Collapse Overview
      Matthew Zapala, MD, PhD, is an assistant professor of clinical radiology in the Pediatric Radiology section in the Department of Radiology and Biomedical Imaging at the University of California, San Francisco. In 2007, he received his PhD in biomedical science-bioinformatics from the University of California, San Diego, where he also completed his medical degree in 2009. In 2010, he completed his one-year internship from Scripps Mercy Hospital in San Diego, California. From 2010-2014, Dr. Zapala finished his four-year Diagnostic Radiology residency from the University of California, San Diego, followed by a pediatric radiology fellowship from Boston Children’s Hospital/Harvard Medical School in 2015.

      Dr. Zapala is a member of the Radiologic Society of North America, American Roentgen Ray Society and the Society of Pediatric Radiology.

      Pediatric Radiology

      Pediatric imaging

      Professional Interests:
      Pediatric radiology, genomics, radiogenomics, bioinformatics, statistical genetics, low dose CT, child abuse, fluoroscopy

      Education and Training:
      • Medical School: University of California, San Diego
      • PhD: University of California, San Diego
      • Internship: Scripps Mercy Hospital, San Diego, California
      • Residency: University of California, San Diego
      • Fellowship: Boston Children's Hospital – Pediatric Radiology

      Collapse Bibliographic 
      Collapse Publications
      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
      List All   |   Timeline
      1. Li Y, Phelps A, Zapala MA, MacKenzie JD, MacKenzie TC, Courtier J. Magnetic resonance imaging of Müllerian duct anomalies in children. Pediatr Radiol. 2016 May; 46(6):796-805. PMID: 27229498.
        View in: PubMed
      2. Zapala MA, Tsai A, Kleinman PK. Growth recovery lines are more common in infants at high vs. low risk for abuse. Pediatr Radiol. 2016 Aug; 46(9):1275-81. PMID: 27147078.
        View in: PubMed
      3. Jamshidi N, Jonasch E, Zapala M, Korn RL, Brooks JD, Ljungberg B, Kuo MD. The radiogenomic risk score stratifies outcomes in a renal cell cancer phase 2 clinical trial. Eur Radiol. 2016 Aug; 26(8):2798-807. PMID: 26560727.
        View in: PubMed
      4. Jamshidi N, Jonasch E, Zapala M, Korn RL, Aganovic L, Zhao H, Tumkur Sitaram R, Tibshirani RJ, Banerjee S, Brooks JD, Ljungberg B, Kuo MD. The Radiogenomic Risk Score: Construction of a Prognostic Quantitative, Noninvasive Image-based Molecular Assay for Renal Cell Carcinoma. Radiology. 2015 Oct; 277(1):114-23. PMID: 26402495.
        View in: PubMed
      5. Zapala MA, Schork NJ. Statistical properties of multivariate distance matrix regression for high-dimensional data analysis. Front Genet. 2012; 3:190. PMID: 23060897; PMCID: PMC3461701.
      6. Luo W, Schork NJ, Marschke KB, Ng SC, Hermann TW, Zhang J, Sanders JM, Tooker P, Malo N, Zapala MA, Dziewanowska ZE, Negro-Vilar A, Meglasson MD. Identification of polymorphisms associated with hypertriglyceridemia and prolonged survival induced by bexarotene in treating non-small cell lung cancer. Anticancer Res. 2011 Jun; 31(6):2303-11. PMID: 21737656.
        View in: PubMed
      7. McLachlan S, Lee SM, Steele TM, Hawthorne PL, Zapala MA, Eskin E, Schork NJ, Anderson GJ, Vulpe CD. In silico QTL mapping of basal liver iron levels in inbred mouse strains. Physiol Genomics. 2011 Feb 11; 43(3):136-47. PMID: 21062905; PMCID: PMC3055709.
      8. Winn ME, Zapala MA, Hovatta I, Risbrough VB, Lillie E, Schork NJ. The effects of globin on microarray-based gene expression analysis of mouse blood. Mamm Genome. 2010 Jun; 21(5-6):268-75. PMID: 20473674; PMCID: PMC2890980.
      9. Zhou D, Wang J, Zapala MA, Xue J, Schork NJ, Haddad GG. Gene expression in mouse brain following chronic hypoxia: role of sarcospan in glial cell death. Physiol Genomics. 2008 Feb 19; 32(3):370-9. PMID: 18056785.
        View in: PubMed
      10. Greenhall JA, Zapala MA, Cáceres M, Libiger O, Barlow C, Schork NJ, Lockhart DJ. Detecting genetic variation in microarray expression data. Genome Res. 2007 Aug; 17(8):1228-35. PMID: 17609390; PMCID: PMC1933513.
      11. Wessel J, Zapala MA, Schork NJ. Accommodating pathway information in expression quantitative trait locus analysis. Genomics. 2007 Jul; 90(1):132-42. PMID: 17493783.
        View in: PubMed
      12. Hovatta I, Zapala MA, Broide RS, Schadt EE, Libiger O, Schork NJ, Lockhart DJ, Barlow C. DNA variation and brain region-specific expression profiles exhibit different relationships between inbred mouse strains: implications for eQTL mapping studies. Genome Biol. 2007; 8(2):R25. PMID: 17324278; PMCID: PMC1852412.
      13. Zapala MA, Schork NJ. Multivariate regression analysis of distance matrices for testing associations between gene expression patterns and related variables. Proc Natl Acad Sci U S A. 2006 Dec 19; 103(51):19430-5. PMID: 17146048; PMCID: PMC1748243.
      14. Zapala MA, Hovatta I, Ellison JA, Wodicka L, Del Rio JA, Tennant R, Tynan W, Broide RS, Helton R, Stoveken BS, Winrow C, Lockhart DJ, Reilly JF, Young WG, Bloom FE, Lockhart DJ, Barlow C. Adult mouse brain gene expression patterns bear an embryologic imprint. Proc Natl Acad Sci U S A. 2005 Jul 19; 102(29):10357-62. PMID: 16002470; PMCID: PMC1173363.
      15. Cáceres M, Lachuer J, Zapala MA, Redmond JC, Kudo L, Geschwind DH, Lockhart DJ, Preuss TM, Barlow C. Elevated gene expression levels distinguish human from non-human primate brains. Proc Natl Acad Sci U S A. 2003 Oct 28; 100(22):13030-5. PMID: 14557539; PMCID: PMC240739.
      16. Zapala MA, Lockhart DJ, Pankratz DG, Garcia AJ, Barlow C, Lockhart DJ. Software and methods for oligonucleotide and cDNA array data analysis. Genome Biol. 2002; 3(6):SOFTWARE0001. PMID: 12093384; PMCID: PMC139376.
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