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    Nico Stuurman

    TitleResearch Associate
    SchoolUCSF School of Medicine
    DepartmentHoward Hughes Medical Instit
    Address600 16th Street
    San Francisco CA 94158
    Phone415-514-3927
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      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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      1. Sage D, Kirshner H, Pengo T, Stuurman N, Min J, Manley S, Unser M. Quantitative evaluation of software packages for single-molecule localization microscopy. Nat Methods. 2015 Aug; 12(8):717-24. PMID: 26076424.
        View in: PubMed
      2. Staudt DW, Liu J, Thorn KS, Stuurman N, Liebling M, Stainier DY. High-resolution imaging of cardiomyocyte behavior reveals two distinct steps in ventricular trabeculation. Development. 2014 Feb; 141(3):585-93. PMID: 24401373; PMCID: PMC3899815.
      3. Moutinho-Pereira S, Stuurman N, Afonso O, Hornsveld M, Aguiar P, Goshima G, Vale RD, Maiato H. Genes involved in centrosome-independent mitotic spindle assembly in Drosophila S2 cells. Proc Natl Acad Sci U S A. 2013 Dec 3; 110(49):19808-13. PMID: 24255106; PMCID: PMC3856817.
      4. Li W, Stuurman N, Ou G. Chromophore-assisted laser inactivation in neural development. Neurosci Bull. 2012 Aug; 28(4):333-41. PMID: 22833033.
        View in: PubMed
      5. Eliceiri KW, Berthold MR, Goldberg IG, Ibáñez L, Manjunath BS, Martone ME, Murphy RF, Peng H, Plant AL, Roysam B, Stuurman N, Stuurmann N, Swedlow JR, Tomancak P, Carpenter AE. Biological imaging software tools. Nat Methods. 2012 Jul; 9(7):697-710. PMID: 22743775; PMCID: PMC3659807.
      6. Stuurman N, Swedlow JR. Software tools, data structures, and interfaces for microscope imaging. Cold Spring Harb Protoc. 2012 Jan; 2012(1):50-61. PMID: 22194261.
        View in: PubMed
      7. Edelstein A, Amodaj N, Hoover K, Vale R, Stuurman N. Computer control of microscopes using µManager. Curr Protoc Mol Biol. 2010 Oct; Chapter 14:Unit14.20. PMID: 20890901; PMCID: PMC3065365.
      8. Ou G, Stuurman N, D'Ambrosio M, Vale RD. Polarized myosin produces unequal-size daughters during asymmetric cell division. Science. 2010 Oct 29; 330(6004):677-80. PMID: 20929735; PMCID: PMC3032534.
      9. Reck-Peterson SL, Derr ND, Stuurman N. Imaging single molecular motor motility with total internal reflection fluorescence microscopy (TIRFM). Cold Spring Harb Protoc. 2010 Mar; 2010(3):pdb.prot5399. PMID: 20194468.
        View in: PubMed
      10. Reck-Peterson SL, Derr ND, Stuurman N. Imaging single molecules using total internal reflection fluorescence microscopy (TIRFM). Cold Spring Harb Protoc. 2010 Mar; 2010(3):pdb.top73. PMID: 20194477.
        View in: PubMed
      11. Reck-Peterson SL, Derr ND, Stuurman N. Determining single-molecule intensity as a function of power density. Cold Spring Harb Protoc. 2010 Mar; 2010(3):pdb.prot5398. PMID: 20194467.
        View in: PubMed
      12. Goshima G, Mayer M, Zhang N, Stuurman N, Vale RD. Augmin: a protein complex required for centrosome-independent microtubule generation within the spindle. J Cell Biol. 2008 May 5; 181(3):421-9. PMID: 18443220; PMCID: PMC2364697.
      13. Guo Y, Walther TC, Rao M, Stuurman N, Goshima G, Terayama K, Wong JS, Vale RD, Walter P, Farese RV. Functional genomic screen reveals genes involved in lipid-droplet formation and utilization. Nature. 2008 May 29; 453(7195):657-61. PMID: 18408709; PMCID: PMC2734507.
      14. Wollman R, Stuurman N. High throughput microscopy: from raw images to discoveries. J Cell Sci. 2007 Nov 1; 120(Pt 21):3715-22. PMID: 17959627.
        View in: PubMed
      15. Griffis ER, Stuurman N, Vale RD. Spindly, a novel protein essential for silencing the spindle assembly checkpoint, recruits dynein to the kinetochore. J Cell Biol. 2007 Jun 18; 177(6):1005-15. PMID: 17576797; PMCID: PMC2064361.
      16. Goshima G, Wollman R, Goodwin SS, Zhang N, Scholey JM, Vale RD, Stuurman N. Genes required for mitotic spindle assembly in Drosophila S2 cells. Science. 2007 Apr 20; 316(5823):417-21. PMID: 17412918; PMCID: PMC2837481.
      17. Tomishige M, Stuurman N, Vale RD. Single-molecule observations of neck linker conformational changes in the kinesin motor protein. Nat Struct Mol Biol. 2006 Oct; 13(10):887-94. PMID: 17013387.
        View in: PubMed
      18. Goshima G, Wollman R, Stuurman N, Scholey JM, Vale RD. Length control of the metaphase spindle. Curr Biol. 2005 Nov 22; 15(22):1979-88. PMID: 16303556.
        View in: PubMed
      19. Cheng LW, Viala JP, Stuurman N, Wiedemann U, Vale RD, Portnoy DA. Use of RNA interference in Drosophila S2 cells to identify host pathways controlling compartmentalization of an intracellular pathogen. Proc Natl Acad Sci U S A. 2005 Sep 20; 102(38):13646-51. PMID: 16157870; PMCID: PMC1224656.
      20. Dean SO, Rogers SL, Stuurman N, Vale RD, Spudich JA. Distinct pathways control recruitment and maintenance of myosin II at the cleavage furrow during cytokinesis. Proc Natl Acad Sci U S A. 2005 Sep 20; 102(38):13473-8. PMID: 16174742; PMCID: PMC1200093.
      21. Rogers SL, Wiedemann U, Stuurman N, Vale RD. Molecular requirements for actin-based lamella formation in Drosophila S2 cells. J Cell Biol. 2003 Sep 15; 162(6):1079-88. PMID: 12975351; PMCID: PMC2172842.
      22. Yaffe MP, Stuurman N, Vale RD. Mitochondrial positioning in fission yeast is driven by association with dynamic microtubules and mitotic spindle poles. Proc Natl Acad Sci U S A. 2003 Sep 30; 100(20):11424-8. PMID: 12972644; PMCID: PMC208773.
      23. Klopfenstein DR, Tomishige M, Stuurman N, Vale RD. Role of phosphatidylinositol(4,5)bisphosphate organization in membrane transport by the Unc104 kinesin motor. Cell. 2002 May 3; 109(3):347-58. PMID: 12015984; PMCID: PMC2851634.
      24. Stuurman N, Pacios Bras C, Schlaman HR, Wijfjes AH, Bloemberg G, Spaink HP. Use of green fluorescent protein color variants expressed on stable broad-host-range vectors to visualize rhizobia interacting with plants. Mol Plant Microbe Interact. 2000 Nov; 13(11):1163-9. PMID: 11059482.
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      25. Bloemberg GV, Wijfjes AH, Lamers GE, Stuurman N, Lugtenberg BJ. Simultaneous imaging of Pseudomonas fluorescens WCS365 populations expressing three different autofluorescent proteins in the rhizosphere: new perspectives for studying microbial communities. Mol Plant Microbe Interact. 2000 Nov; 13(11):1170-6. PMID: 11059483.
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      26. Langeveld SM, van Wijk R, Stuurman N, Kijne JW, de Pater S. B-type granule containing protrusions and interconnections between amyloplasts in developing wheat endosperm revealed by transmission electron microscopy and GFP expression. J Exp Bot. 2000 Aug; 51(349):1357-61. PMID: 10944148.
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      27. Pacios Bras C, Jordá MA, Wijfjes AH, Harteveld M, Stuurman N, Thomas-Oates JE, Spaink HP. A Lotus japonicus nodulation system based on heterologous expression of the fucosyl transferase NodZ and the acetyl transferase NoIL in Rhizobium leguminosarum. Mol Plant Microbe Interact. 2000 Apr; 13(4):475-9. PMID: 10755312.
        View in: PubMed
      28. Stuurman N, Delbecque JP, Callaerts P, Aebi U. Ectopic overexpression of Drosophila lamin C is stage-specific lethal. Exp Cell Res. 1999 May 1; 248(2):350-7. PMID: 10222127.
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      29. Schneider U, Mini T, Jenö P, Fisher PA, Stuurman N. Phosphorylation of the major Drosophila lamin in vivo: site identification during both M-phase (meiosis) and interphase by electrospray ionization tandem mass spectrometry. Biochemistry. 1999 Apr 6; 38(14):4620-32. PMID: 10194384.
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      30. Stuurman N, Häner M, Sasse B, Hübner W, Suter B, Aebi U. Interactions between coiled-coil proteins: Drosophila lamin Dm0 binds to the bicaudal-D protein. Eur J Cell Biol. 1999 Apr; 78(4):278-87. PMID: 10350216.
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      31. Krohne G, Stuurman N, Kempf A. Assembly of Drosophila lamin Dm0 and C mutant proteins studied with the baculovirus system. Eur J Cell Biol. 1998 Dec; 77(4):276-83. PMID: 9930652.
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      32. Sasse B, Aebi U, Stuurman N. A tailless Drosophila lamin Dm0 fragment reveals lateral associations of dimers. J Struct Biol. 1998 Sep; 123(1):56-66. PMID: 9774545.
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      33. Goldberg M, Lu H, Stuurman N, Ashery-Padan R, Weiss AM, Yu J, Bhattacharyya D, Fisher PA, Gruenbaum Y, Wolfner MF. Interactions among Drosophila nuclear envelope proteins lamin, otefin, and YA. Mol Cell Biol. 1998 Jul; 18(7):4315-23. PMID: 9632815; PMCID: PMC109015.
      34. Stuurman N, Heins S, Aebi U. Nuclear lamins: their structure, assembly, and interactions. J Struct Biol. 1998; 122(1-2):42-66. PMID: 9724605.
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      35. Rzepecki R, Bogachev SS, Kokoza E, Stuurman N, Fisher PA. In vivo association of lamins with nucleic acids in Drosophila melanogaster. J Cell Sci. 1998 Jan; 111 ( Pt 1):121-9. PMID: 9394018.
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      36. Sasse B, Lustig A, Aebi U, Stuurman N. In vitro assembly of Drosophila lamin Dm0--lamin polymerization properties are conserved. Eur J Biochem. 1997 Nov 15; 250(1):30-8. PMID: 9431987.
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      37. Klapper M, Exner K, Kempf A, Gehrig C, Stuurman N, Fisher PA, Krohne G. Assembly of A- and B-type lamins studied in vivo with the baculovirus system. J Cell Sci. 1997 Oct; 110 ( Pt 20):2519-32. PMID: 9372441.
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      38. Stuurman N. Identification of a conserved phosphorylation site modulating nuclear lamin polymerization. FEBS Lett. 1997 Jan 20; 401(2-3):171-4. PMID: 9013881.
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      39. Stuurman N, Sasse B, Fisher PA. Intermediate filament protein polymerization: molecular analysis of Drosophila nuclear lamin head-to-tail binding. J Struct Biol. 1996 Jul-Aug; 117(1):1-15. PMID: 8776884.
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      40. Baricheva EA, Berrios M, Bogachev SS, Borisevich IV, Lapik ER, Sharakhov IV, Stuurman N, Fisher PA. DNA from Drosophila melanogaster beta-heterochromatin binds specifically to nuclear lamins in vitro and the nuclear envelope in situ. Gene. 1996 Jun 1; 171(2):171-6. PMID: 8666268.
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      41. Zhao K, Harel A, Stuurman N, Guedalia D, Gruenbaum Y. Binding of matrix attachment regions to nuclear lamin is mediated by the rod domain and depends on the lamin polymerization state. FEBS Lett. 1996 Feb 12; 380(1-2):161-4. PMID: 8603728.
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      42. Riemer D, Stuurman N, Berrios M, Hunter C, Fisher PA, Weber K. Expression of Drosophila lamin C is developmentally regulated: analogies with vertebrate A-type lamins. J Cell Sci. 1995 Oct; 108 ( Pt 10):3189-98. PMID: 7593280.
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      43. Stuurman N, Maus N, Fisher PA. Interphase phosphorylation of the Drosophila nuclear lamin: site-mapping using a monoclonal antibody. J Cell Sci. 1995 Sep; 108 ( Pt 9):3137-44. PMID: 8537453.
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      44. Maus N, Stuurman N, Fisher PA. Disassembly of the Drosophila nuclear lamina in a homologous cell-free system. J Cell Sci. 1995 May; 108 ( Pt 5):2027-35. PMID: 7657722.
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      45. Koken MH, Puvion-Dutilleul F, Guillemin MC, Viron A, Linares-Cruz G, Stuurman N, de Jong L, Szostecki C, Calvo F, Chomienne C. The t(15;17) translocation alters a nuclear body in a retinoic acid-reversible fashion. EMBO J. 1994 Mar 1; 13(5):1073-83. PMID: 8131741; PMCID: PMC394915.
      46. Cordes VC, Reidenbach S, Köhler A, Stuurman N, van Driel R, Franke WW. Intranuclear filaments containing a nuclear pore complex protein. J Cell Biol. 1993 Dec; 123(6 Pt 1):1333-44. PMID: 8253834; PMCID: PMC2290899.
      47. Mattia E, Hoff WD, den Blaauwen J, Meijne AM, Stuurman N, van Renswoude J. Induction of nuclear lamins A/C during in vitro-induced differentiation of F9 and P19 embryonal carcinoma cells. Exp Cell Res. 1992 Dec; 203(2):449-55. PMID: 1281113.
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      48. de Graaf A, Humbel BM, Stuurman N, van Bergen en Henegouwen PM, Verkleij AJ. Three-dimensional immunogold labeling of nuclear matrix proteins in permeabilized cells. Cell Biol Int Rep. 1992 Aug; 16(8):827-36. PMID: 1446352.
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      49. Stuurman N, de Jong L, van Driel R. Nuclear frameworks: concepts and operational definitions. Cell Biol Int Rep. 1992 Aug; 16(8):837-52. PMID: 1446353.
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      50. Stuurman N, Floore A, Colen A, de Jong L, van Driel R. Stabilization of the nuclear matrix by disulfide bridges: identification of matrix polypeptides that form disulfides. Exp Cell Res. 1992 Jun; 200(2):285-94. PMID: 1572396.
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      51. Stuurman N, de Graaf A, Floore A, Josso A, Humbel B, de Jong L, van Driel R. A monoclonal antibody recognizing nuclear matrix-associated nuclear bodies. J Cell Sci. 1992 Apr; 101 ( Pt 4):773-84. PMID: 1527179.
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      52. de Jong L, van Driel R, Stuurman N, Meijne AM, van Renswoude J. Principles of nuclear organization. Cell Biol Int Rep. 1990 Dec; 14(12):1051-74. PMID: 2083425.
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      53. Stuurman N, Meijne AM, van der Pol AJ, de Jong L, van Driel R, van Renswoude J. The nuclear matrix from cells of different origin. Evidence for a common set of matrix proteins. J Biol Chem. 1990 Apr 5; 265(10):5460-5. PMID: 2180926.
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      54. Stuurman N, Van Driel R, De Jong L, Meijne AM, Van Renswoude J. The protein composition of the nuclear matrix of murine P19 embryonal carcinoma cells is differentiation-stage dependent. Exp Cell Res. 1989 Feb; 180(2):460-6. PMID: 2914580.
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