Sami Tuomivaara • UCSF Profiles

Sami Tuomivaara, PhD

Title(s)	Specialist, Ob/Gyn, Reproductive Sciences
School	School of Medicine
Address	Location Required, #001
Phone	--
ORCID	0000-0002-7150-0665
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Overview

Interests

Biochemistry, Proteomics

ORNG Applications

Collaboration Interests

Bibliographic

Publications

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.

Altmetrics Details

PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.

Fluoride-related changes in the fetal cord blood proteome; a pilot study. Res Sq. 2024 Mar 01. Tuomivaara ST, Goin DE, Fisher SJ, Hall SC, Mattis AN, Den Besten PK. PMID: 38464284; PMCID: PMC10925477.

View in: PubMed Mentions:
Triplex glycan quantification by metabolic labeling with isotopically labeled glucose in yeast. Anal Chim Acta. 2024 Feb 01; 1288:342114. Pham TT, Kim JY, Tuomivaara ST, Lee YI, Kim S, Wells L, Lim JM. PMID: 38220268.

View in: PubMed Mentions: Fields:
Che Chemistry Techniques
Translation:Animals
SLAPSHOT reveals rapid dynamics of extracellularly exposed proteome in response to calcium-activated plasma membrane phospholipid scrambling. bioRxiv. 2023 Mar 26. Tuomivaara ST, Teo CF, Jan YN, Jan LY, Wiita AP. PMID: 36993417; PMCID: PMC10055316.

View in: PubMed Mentions:
Allosteric HSP70 inhibitors perturb mitochondrial proteostasis and overcome proteasome inhibitor resistance in multiple myeloma. Cell Chem Biol. 2022 08 18; 29(8):1288-1302.e7. Ferguson ID, Lin YT, Lam C, Shao H, Tharp KM, Hale M, Kasap C, Mariano MC, Kishishita A, Patiño Escobar B, Mandal K, Steri V, Wang D, Phojanakong P, Tuomivaara ST, Hann B, Driessen C, Van Ness B, Gestwicki JE, Wiita AP. PMID: 35853457; PMCID: PMC9434701.

View in: PubMed Mentions: 5 Fields:
Bio Biochemistry Bio Biology Che Chemistry
Translation:Humans Cells
The surfaceome of multiple myeloma cells suggests potential immunotherapeutic strategies and protein markers of drug resistance. Nat Commun. 2022 07 15; 13(1):4121. Ferguson ID, Patiño-Escobar B, Tuomivaara ST, Lin YT, Nix MA, Leung KK, Kasap C, Ramos E, Nieves Vasquez W, Talbot A, Hale M, Naik A, Kishishita A, Choudhry P, Lopez-Girona A, Miao W, Wong SW, Wolf JL, Martin TG, Shah N, Vandenberg S, Prakash S, Besse L, Driessen C, Posey AD, Mullins RD, Eyquem J, Wells JA, Wiita AP. PMID: 35840578; PMCID: PMC9287322.

View in: PubMed Mentions: 21 Fields:
Bio Biology Sci Science
Translation:Humans
Establishment of fetomaternal tolerance through glycan-mediated B cell suppression. Nature. 2022 03; 603(7901):497-502. Rizzuto G, Brooks JF, Tuomivaara ST, McIntyre TI, Ma S, Rideaux D, Zikherman J, Fisher SJ, Erlebacher A. PMID: 35236989; PMCID: PMC9592526.

View in: PubMed Mentions: 15 Fields:
Sci Science
Translation:Animals Cells
Isotope labeling strategies of glycans for mass spectrometry-based quantitative glycomics . Microchemical Journal. 2021; 170:106655. Yun J, Jo J-Y, Tuomivaara ST, Lim J-M. View Publication.
RElative QUantitation Inferred by Evaluating Mixtures (REQUIEM). Anal Chim Acta. 2017 Nov 15; 993:22-37. Tuomivaara ST, Schliekelman P, Nairn AV, Moremen KW, York WS. PMID: 29078952; PMCID: PMC5735846.

View in: PubMed Mentions: Fields:
Che Chemistry Techniques
Structural, mutagenic and in silico studies of xyloglucan fucosylation in Arabidopsis thaliana suggest a water-mediated mechanism. Plant J. 2017 Sep; 91(6):931-949. Urbanowicz BR, Bharadwaj VS, Alahuhta M, Peña MJ, Lunin VV, Bomble YJ, Wang S, Yang JY, Tuomivaara ST, Himmel ME, Moremen KW, York WS, Crowley MF. PMID: 28670741; PMCID: PMC5735850.

View in: PubMed Mentions: 28 Fields:
Bot Botany Cel Cell Biology Mol Molecular Biology
Translation:Animals Cells
Functional Analyses of Resurrected and Contemporary Enzymes Illuminate an Evolutionary Path for the Emergence of Exolysis in Polysaccharide Lyase Family 2. J Biol Chem. 2015 Aug 28; 290(35):21231-43. McLean R, Hobbs JK, Suits MD, Tuomivaara ST, Jones DR, Boraston AB, Abbott DW. PMID: 26160170; PMCID: PMC4571855.

View in: PubMed Mentions: 7 Fields:
Bio Biochemistry
Translation:Cells
Galactose-depleted xyloglucan is dysfunctional and leads to dwarfism in Arabidopsis. Plant Physiol. 2015 Apr; 167(4):1296-306. Kong Y, Peña MJ, Renna L, Avci U, Pattathil S, Tuomivaara ST, Li X, Reiter WD, Brandizzi F, Hahn MG, Darvill AG, York WS, O'Neill MA. PMID: 25673778; PMCID: PMC4378170.

View in: PubMed Mentions: 39 Fields:
Phy Physiology
Translation:Animals Cells
Generation and structural validation of a library of diverse xyloglucan-derived oligosaccharides, including an update on xyloglucan nomenclature. Carbohydr Res. 2015 Jan 30; 402:56-66. Tuomivaara ST, Yaoi K, O'Neill MA, York WS. PMID: 25497333.

View in: PubMed Mentions: 48 Fields:
Bio Biochemistry Met Metabolism
Translation:Animals Cells
Methods for structural characterization of the products of cellulose- and xyloglucan-hydrolyzing enzymes. Methods Enzymol. 2012; 510:121-39. Peña MJ, Tuomivaara ST, Urbanowicz BR, O'Neill MA, York WS. PMID: 22608724.

View in: PubMed Mentions: 15 Fields:
Bio Biochemistry
Translation:Animals Cells