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Soeren Mueller, PhD

TitlePostdoctoral Scholar
SchoolUCSF School of Medicine
DepartmentNeurological Surgery
Address1450 Third St
San Francisco CA 94158
Phone415-514-0408
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    Collapse Biography 
    Collapse Awards and Honors
    Society for Neuro-Oncology2016Adult Basic Research Award
    American Academy of Neurology2017Critical advance in the field of neuroscience

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Bartlett TE, Müller S, Diaz A. Single-cell Co-expression Subnetwork Analysis. Sci Rep. 2017 Nov 08; 7(1):15066. PMID: 29118406.
      View in: PubMed
    2. Müller S, Diaz A. Single-Cell mRNA Sequencing in Cancer Research: Integrating the Genomic Fingerprint. Front Genet. 2017; 8:73. PMID: 28620412.
      View in: PubMed
    3. Müller S, Liu SJ, Di Lullo E, Malatesta M, Pollen AA, Nowakowski TJ, Kohanbash G, Aghi M, Kriegstein AR, Lim DA, Diaz A. Single-cell sequencing maps gene expression to mutational phylogenies in PDGF- and EGF-driven gliomas. Mol Syst Biol. 2016 Nov 25; 12(11):889. PMID: 27888226.
      View in: PubMed
    4. Afonso-Grunz F, Müller S. Principles of miRNA-mRNA interactions: beyond sequence complementarity. Cell Mol Life Sci. 2015 Aug; 72(16):3127-41. PMID: 26037721.
      View in: PubMed
    5. Müller S, Raulefs S, Bruns P, Afonso-Grunz F, Plötner A, Thermann R, Jäger C, Schlitter AM, Kong B, Regel I, Roth WK, Rotter B, Hoffmeier K, Kahl G, Koch I, Theis FJ, Kleeff J, Winter P, Michalski CW. Next-generation sequencing reveals novel differentially regulated mRNAs, lncRNAs, miRNAs, sdRNAs and a piRNA in pancreatic cancer. Mol Cancer. 2015 Apr 25; 14:94. PMID: 25910082; PMCID: PMC4417536.
    6. Fittschen M, Lastres-Becker I, Halbach MV, Damrath E, Gispert S, Azizov M, Walter M, Müller S, Auburger G. Genetic ablation of ataxin-2 increases several global translation factors in their transcript abundance but decreases translation rate. Neurogenetics. 2015 Jul; 16(3):181-92. PMID: 25721894; PMCID: PMC4475250.
    7. Müller S. In silico analysis of regulatory networks underlines the role of miR-10b-5p and its target BDNF in huntington's disease. Transl Neurodegener. 2014; 3:17. PMID: 25210621; PMCID: PMC4160136.
    8. Müller S, Rycak L, Afonso-Grunz F, Winter P, Zawada AM, Damrath E, Scheider J, Schmäh J, Koch I, Kahl G, Rotter B. APADB: a database for alternative polyadenylation and microRNA regulation events. Database (Oxford). 2014; 2014. PMID: 25052703; PMCID: PMC4105710.
    9. Müller S, Nowak K. Exploring the miRNA-mRNA regulatory network in clear cell renal cell carcinomas by next-generation sequencing expression profiles. Biomed Res Int. 2014; 2014:948408. PMID: 24977165; PMCID: PMC4054612.
    10. Zawada AM, Rogacev KS, Müller S, Rotter B, Winter P, Fliser D, Heine GH. Massive analysis of cDNA Ends (MACE) and miRNA expression profiling identifies proatherogenic pathways in chronic kidney disease. Epigenetics. 2014 Jan; 9(1):161-72. PMID: 24184689; PMCID: PMC3928179.
    11. Müller S, Rycak L, Winter P, Kahl G, Koch I, Rotter B. omiRas: a Web server for differential expression analysis of miRNAs derived from small RNA-Seq data. Bioinformatics. 2013 Oct 15; 29(20):2651-2. PMID: 23946503.
      View in: PubMed
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