Allen Ye • UCSF Profiles

Allen Ye, MD, PhD

Title(s)	Clinical Fellow, Radiology
School	School of Medicine
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Bibliographic

Publications

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.

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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.

Utilizing a Digital Swarm Intelligence Platform to Improve Consensus Among Radiologists and Exploring Its Applications. J Digit Imaging. 2022 Nov 22. Shah R, Astuto Arouche Nunes B, Gleason T, Fletcher W, Banaga J, Sweetwood K, Ye A, Patel R, McGill K, Link T, Crane J, Pedoia V, Majumdar S. PMID: 36414832.

View in: PubMed Mentions: Fields:
Dia Diagnostic Imaging Med Medical Informatics Rad Radiology
Boba sign with a twist - A variant presentation of a mature cystic teratoma complicated by torsion and rupture. Clin Imaging. 2022 Mar; 83:28-32. Ye AQ, Reyes MF, Lester F, Ye J, Umetsu S, Poder L, Shum DJ, Choi HH. PMID: 34952488; PMCID: PMC9254327.

View in: PubMed Mentions: Fields:
Dia Diagnostic Imaging
Translation:Humans
Detection of axonal degeneration in a mouse model of Huntington's disease: comparison between diffusion tensor imaging and anomalous diffusion metrics. MAGMA. 2019 Aug; 32(4):461-471. Gatto RG, Ye AQ, Colon-Perez L, Mareci TH, Lysakowski A, Price SD, Brady ST, Karaman M, Morfini G, Magin RL. PMID: 30771034; PMCID: PMC7837609.

View in: PubMed Mentions: 11 Fields:
Dia Diagnostic Imaging
Translation:Animals Cells
Scattering and Diffraction of Elastodynamic Waves in a Concentric Cylindrical Phantom for MR Elastography. IEEE Trans Biomed Eng. 2016 11; 63(11):2308-2316. Schwartz BL, Yin Z, Yasar TK, Liu Y, Khan AA, Ye AQ, Royston TJ, Magin RL. PMID: 26886963; PMCID: PMC5097039.

View in: PubMed Mentions: 2 Fields:
Bio Biomedical Engineering
The intrinsic geometry of the human brain connectome. Brain Inform. 2015 Dec; 2(4):197-210. Ye AQ, Ajilore OA, Conte G, GadElkarim J, Thomas-Ramos G, Zhan L, Yang S, Kumar A, Magin RL, G Forbes A, Leow AD. PMID: 27747562; PMCID: PMC4737666.

View in: PubMed Mentions: 6
The intrinsic geometry of the human brain connectome. Brain Inform. 2015; 2:197-210. Ye AQ, Ajilore OA, Conte G, GadElkarim J, Thomas-Ramos G, Zhan L, Yang S, Kumar A, Magin RL, G Forbes A, Leow AD. PMID: 26870631.

View in: PubMed Mentions:
Biological and MRI characterization of biomimetic ECM scaffolds for cartilage tissue regeneration. Biomaterials. 2015 Dec; 71:58-70. Ravindran S, Kotecha M, Huang CC, Ye A, Pothirajan P, Yin Z, Magin R, George A. PMID: 26318817; PMCID: PMC4572912.

View in: PubMed Mentions: 20 Fields:
Bio Biomedical Engineering
Translation:Humans Cells
Analysis of YFP(J16)-R6/2 reporter mice and postmortem brains reveals early pathology and increased vulnerability of callosal axons in Huntington's disease. Hum Mol Genet. 2015 Sep 15; 24(18):5285-98. Gatto RG, Chu Y, Ye AQ, Price SD, Tavassoli E, Buenaventura A, Brady ST, Magin RL, Kordower JH, Morfini GA. PMID: 26123489; PMCID: PMC4550824.

View in: PubMed Mentions: 24 Fields:
Gen Genetics Mol Molecular Biology
Translation:Humans Animals Cells
Measuring embeddedness: Hierarchical scale-dependent information exchange efficiency of the human brain connectome. Hum Brain Mapp. 2015 Sep; 36(9):3653-65. Ye AQ, Zhan L, Conrin S, GadElKarim J, Zhang A, Yang S, Feusner JD, Kumar A, Ajilore O, Leow A. PMID: 26096223; PMCID: PMC4898972.

View in: PubMed Mentions: 10 Fields:
Bra Brain
Translation:Humans
Anisotropic fractional diffusion tensor imaging. J Vib Control. 2016 May; 22(9):2211-2221. Meerschaert MM, Magin RL, Ye AQ. PMID: 27499605; PMCID: PMC4973862.

View in: PubMed Mentions: 4
Diffusion tensor MRI phantom exhibits anomalous diffusion. Annu Int Conf IEEE Eng Med Biol Soc. 2014; 2014:746-9. Ye AQ, Hubbard Cristinacce PL, Zhou FL, Yin Z, Parker GJ, Magin RL. PMID: 25570066; PMCID: PMC4605561.

View in: PubMed Mentions: 5 Fields:
Bio Biomedical Engineering
Translation:Cells
In vivo assessment of oxygen consumption via Deuterium Magnetic Resonance. Adv Exp Med Biol. 2011; 701:193-9. Mateescu GD, Ye A, Flask CA, Erokwu B, Duerk JL. PMID: 21445787.

View in: PubMed Mentions: 8 Fields:
Bio Biology Med Medicine (General)
Translation:Animals
Ex vivo diffusion tensor MRI reflects microscopic structural remodeling associated with aging and disease progression in normal and cardiomyopathic Syrian hamsters. NMR Biomed. 2009 Oct; 22(8):819-25. Li W, Lu M, Banerjee S, Zhong J, Ye A, Molter J, Yu X. PMID: 19434665; PMCID: PMC2849973.

View in: PubMed Mentions: 15 Fields:
Dia Diagnostic Imaging Nuc Nuclear Medicine
Translation:Humans Animals