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Modelling pathological spread through the structural connectome in the frontotemporal dementia clinical spectrum. Brain. 2024 Nov 29.
Agosta F, Basaia S, Spinelli EG, Facente F, Lumaca L, Ghirelli A, Canu E, Castelnovo V, Sibilla E, Tripodi C, Freri F, Cecchetti G, Magnani G, Caso F, Verde F, Ticozzi N, Silani V, Caroppo P, Prioni S, Villa C, Tremolizzo L, Appollonio I, Raj A, Filippi M. PMID: 39611765.
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PubMed Mentions: Fields:
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Integrative, segregative, and degenerate harmonics of the structural connectome. Commun Biol. 2024 Aug 14; 7(1):986.
Sipes BS, Nagarajan SS, Raj A. PMID: 39143303; PMCID: PMC11324790.
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PubMed Mentions: Translation:
Humans
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Beyond the Buzz: Cortical and subcortical brain changes in patients with pulsatile tinnitus. Neuroimage Clin. 2024; 43:103653.
Remer J, Narsinh K, Caton T, Lamboy A, Tu-Chan A, Raj A, Amans MR. PMID: 39208482; PMCID: PMC11401154.
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PubMed Mentions: Fields:
Translation:
Humans
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Understanding the complex interplay between tau, amyloid and the network in the spatiotemporal progression of Alzheimer's Disease. bioRxiv. 2024 Jul 31.
Raj A, Torok J, Ranasinghe K. PMID: 38559176; PMCID: PMC10979926.
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PubMed Mentions:
-
Simulation-based Inference of Developmental EEG Maturation with the Spectral Graph Model. ArXiv. 2024 Jul 26.
Bernardo D, Xie X, Verma P, Kim J, Liu V, Numis AL, Wu Y, Glass HC, Yap PT, Nagarajan SS, Raj A. PMID: 39040639; PMCID: PMC11261974.
View in:
PubMed Mentions:
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Directionality bias underpins divergent spatiotemporal progression of Alzheimer-related tauopathy in mouse models. bioRxiv. 2024 Jul 23.
Torok J, Mezias C, Raj A. PMID: 38895243; PMCID: PMC11185722.
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PubMed Mentions:
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Spectral graph model for fMRI: a biophysical, connectivity-based generative model for the analysis of frequency-resolved resting state fMRI. bioRxiv. 2024 Mar 27.
Raj A, Sipes BS, Verma P, Mathalon DH, Biswal B, Nagarajan S. PMID: 38586057; PMCID: PMC10996488.
View in:
PubMed Mentions:
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Impaired long-range excitatory time scale predicts abnormal neural oscillations and cognitive deficits in Alzheimer's disease. Alzheimers Res Ther. 2024 03 19; 16(1):62.
Verma P, Ranasinghe K, Prasad J, Cai C, Xie X, Lerner H, Mizuiri D, Miller B, Rankin K, Vossel K, Cheung SW, Nagarajan SS, Raj A. PMID: 38504361; PMCID: PMC10953266.
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PubMed Mentions: Fields:
Translation:
Humans
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Selective vulnerability and resilience to Alzheimer's disease tauopathy as a function of genes and the connectome. bioRxiv. 2024 Mar 08.
Anand C, Torok J, Abdelnour F, Maia PD, Raj A. PMID: 38496606; PMCID: PMC10942335.
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PubMed Mentions:
-
Cortical Synchrony and Information Flow during Transition from Wakefulness to Light Non-Rapid Eye Movement Sleep. J Neurosci. 2023 11 29; 43(48):8157-8171.
Fan JM, Kudo K, Verma P, Ranasinghe KG, Morise H, Findlay AM, Vossel K, Kirsch HE, Raj A, Krystal AD, Nagarajan SS. PMID: 37788939; PMCID: PMC10697405.
View in:
PubMed Mentions:
5 Fields:
Translation:
Humans
-
Cellular underpinnings of the selective vulnerability to tauopathic insults in Alzheimer's disease. bioRxiv. 2023 Nov 29.
Torok J, Maia PD, Anand C, Raj A. PMID: 38076913; PMCID: PMC10705232.
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PubMed Mentions:
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Impaired long-range excitatory time scale predicts abnormal neural oscillations and cognitive deficits in Alzheimer's disease. Res Sq. 2023 Nov 01.
Verma P, Ranasinghe K, Prasad J, Cai C, Xie X, Lerner H, Mizuiri D, Miller B, Rankin K, Vossel K, Cheung SW, Nagarajan S, Raj A. PMID: 36993350; PMCID: PMC10055509.
View in:
PubMed Mentions:
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Spatial cell-type enrichment predicts mouse brain connectivity. Cell Rep. 2023 10 31; 42(10):113258.
Sun S, Torok J, Mezias C, Ma D, Raj A. PMID: 37858469.
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PubMed Mentions:
1 Fields:
Translation:
HumansAnimalsCells
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Dynamic functional connectivity MEG features of Alzheimer's disease. Neuroimage. 2023 Nov 01; 281:120358.
Jin H, Ranasinghe KG, Prabhu P, Dale C, Gao Y, Kudo K, Vossel K, Raj A, Nagarajan SS, Jiang F. PMID: 37699440; PMCID: PMC10865998.
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PubMed Mentions: Fields:
Translation:
Humans
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Bayesian inference of a spectral graph model for brain oscillations. Neuroimage. 2023 10 01; 279:120278.
Jin H, Verma P, Jiang F, Nagarajan SS, Raj A. PMID: 37516373; PMCID: PMC10840584.
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PubMed Mentions:
4 Fields:
Translation:
Humans
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Bayesian Inference of a Spectral Graph Model for Brain Oscillations. bioRxiv. 2023 Mar 11.
Jin H, Verma P, Jiang F, Nagarajan S, Raj A. PMID: 36909647; PMCID: PMC10002745.
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PubMed Mentions:
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A joint subspace mapping between structural and functional brain connectomes. Neuroimage. 2023 05 15; 272:119975.
Ghosh S, Raj A, Nagarajan SS. PMID: 36870432; PMCID: PMC11244732.
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PubMed Mentions:
2 Fields:
Translation:
Humans
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Stability and dynamics of a spectral graph model of brain oscillations. Netw Neurosci. 2023; 7(1):48-72.
Verma P, Nagarajan S, Raj A. PMID: 37334000; PMCID: PMC10270709.
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PubMed Mentions:
7
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The effects of microglia on tauopathy progression can be quantified using Nexopathy in silico (Nexis) models. Sci Rep. 2022 12 07; 12(1):21170.
Anand C, Maia PD, Torok J, Mezias C, Raj A. PMID: 36477076; PMCID: PMC9729195.
View in:
PubMed Mentions:
5 Fields:
-
Editorial: Advances in brain functional and structural networks modeling via graph theory. Front Neurosci. 2022; 16:1031280.
Abdelnour F, Kuceyeski A, Raj A, Iturria-Medina Y, Deslauriers-Gauthier S. PMID: 36408385; PMCID: PMC9671134.
View in:
PubMed Mentions:
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Structure-function models of temporal, spatial, and spectral characteristics of non-invasive whole brain functional imaging. Front Neurosci. 2022; 16:959557.
Raj A, Verma P, Nagarajan S. PMID: 36110093; PMCID: PMC9468900.
View in:
PubMed Mentions:
7
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Connectome-based biophysics models of Alzheimer's disease diagnosis and prognosis. Transl Res. 2023 04; 254:13-23.
Torok J, Anand C, Verma P, Raj A. PMID: 36031051; PMCID: PMC11019890.
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PubMed Mentions:
2 Fields:
Translation:
Humans
-
Altered excitatory and inhibitory neuronal subpopulation parameters are distinctly associated with tau and amyloid in Alzheimer's disease. Elife. 2022 05 26; 11.
Ranasinghe KG, Verma P, Cai C, Xie X, Kudo K, Gao X, Lerner H, Mizuiri D, Strom A, Iaccarino L, La Joie R, Miller BL, Gorno-Tempini ML, Rankin KP, Jagust WJ, Vossel K, Rabinovici GD, Raj A, Nagarajan SS. PMID: 35616532; PMCID: PMC9217132.
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PubMed Mentions:
39 Fields:
Translation:
Humans
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High activity and high functional connectivity are mutually exclusive in resting state zebrafish and human brains. BMC Biol. 2022 04 11; 20(1):84.
Zarei M, Xie D, Jiang F, Bagirov A, Huang B, Raj A, Nagarajan S, Guo S. PMID: 35410342; PMCID: PMC8996543.
View in:
PubMed Mentions:
1 Fields:
Translation:
HumansAnimalsCells
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Matrix Inversion and Subset Selection (MISS): A pipeline for mapping of diverse cell types across the murine brain. Proc Natl Acad Sci U S A. 2022 04 05; 119(14):e2111786119.
Mezias C, Torok J, Maia PD, Markley E, Raj A. PMID: 35363567; PMCID: PMC9168512.
View in:
PubMed Mentions:
1 Fields:
Translation:
AnimalsCells
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Time-varying dynamic network model for dynamic resting state functional connectivity in fMRI and MEG imaging. Neuroimage. 2022 07 01; 254:119131.
Jiang F, Jin H, Gao Y, Xie X, Cummings J, Raj A, Nagarajan S. PMID: 35337963; PMCID: PMC9942947.
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PubMed Mentions:
8 Fields:
Translation:
Humans
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Predicting Functional Connectivity From Observed and Latent Structural Connectivity via Eigenvalue Mapping. Front Neurosci. 2022; 16:810111.
Cummings JA, Sipes B, Mathalon DH, Raj A. PMID: 35368264; PMCID: PMC8964629.
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PubMed Mentions:
6
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Modeling seeding and neuroanatomic spread of pathology in amyotrophic lateral sclerosis. Neuroimage. 2022 05 01; 251:118968.
Pandya S, Maia PD, Freeze B, Menke RAL, Talbot K, Turner MR, Raj A. PMID: 35143975; PMCID: PMC10729776.
View in:
PubMed Mentions:
7 Fields:
Translation:
HumansCells
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Spectral graph theory of brain oscillations--Revisited and improved. Neuroimage. 2022 04 01; 249:118919.
Verma P, Nagarajan S, Raj A. PMID: 35051584; PMCID: PMC9506601.
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PubMed Mentions:
17 Fields:
Translation:
Humans
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Emergence of directional bias in tau deposition from axonal transport dynamics. PLoS Comput Biol. 2021 07; 17(7):e1009258.
Torok J, Maia PD, Verma P, Mezias C, Raj A. PMID: 34314441; PMCID: PMC8345857.
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PubMed Mentions:
1 Fields:
Translation:
HumansAnimalsCells
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Combined Model of Aggregation and Network Diffusion Recapitulates Alzheimer's Regional Tau-Positron Emission Tomography. Brain Connect. 2021 10; 11(8):624-638.
Raj A, Tora V, Gao X, Cho H, Choi JY, Ryu YH, Lyoo CH, Franchi B. PMID: 33947253; PMCID: PMC8817716.
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PubMed Mentions:
1 Fields:
Translation:
Humans
-
Network-constrained technique to characterize pathology progression rate in Alzheimer's disease. Brain Commun. 2021; 3(3):fcab144.
Powell F, Tosun D, Raj A, Alzheimer’s Disease Neuroimaging Initiative. PMID: 34704025; PMCID: PMC8376686.
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PubMed Mentions:
1
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Graph Models of Pathology Spread in Alzheimer's Disease: An Alternative to Conventional Graph Theoretic Analysis. Brain Connect. 2021 12; 11(10):799-814.
Raj A. PMID: 33858198; PMCID: PMC8817711.
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PubMed Mentions:
4 Fields:
Translation:
Humans
-
Emergence of canonical functional networks from the structural connectome. Neuroimage. 2021 08 15; 237:118190.
Xie X, Cai C, Damasceno PF, Nagarajan SS, Raj A. PMID: 34022382; PMCID: PMC8451304.
View in:
PubMed Mentions:
13 Fields:
Translation:
Humans
-
Population-based input function for TSPO quantification and kinetic modeling with [11C]-DPA-713. EJNMMI Phys. 2021 Apr 29; 8(1):39.
Akerele MI, Zein SA, Pandya S, Nikolopoulou A, Gauthier SA, Raj A, Henchcliffe C, Mozley PD, Karakatsanis NA, Gupta A, Babich J, Nehmeh SA. PMID: 33914185; PMCID: PMC8085191.
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PubMed Mentions:
4
-
Network model of pathology spread recapitulates neurodegeneration and selective vulnerability in Huntington's Disease. Neuroimage. 2021 07 15; 235:118008.
Raj A, Powell F. PMID: 33789134.
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PubMed Mentions:
9 Fields:
Translation:
HumansCells
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Algebraic relationship between the structural network's Laplacian and functional network's adjacency matrix is preserved in temporal lobe epilepsy subjects. Neuroimage. 2021 03; 228:117705.
Abdelnour F, Dayan M, Devinsky O, Thesen T, Raj A. PMID: 33385550.
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PubMed Mentions:
8 Fields:
Translation:
Humans
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Molecular Imaging of Striatal Dopaminergic Neuronal Loss and the Neurovascular Unit in Parkinson Disease. Front Neurosci. 2020; 14:528809.
Ivanidze J, Skafida M, Pandya S, Patel D, Osborne JR, Raj A, Gupta A, Henchcliffe C, Dyke JP. PMID: 33071729; PMCID: PMC7530280.
View in:
PubMed Mentions:
11
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A dictionary-based graph-cut algorithm for MRI reconstruction. NMR Biomed. 2020 12; 33(12):e4344.
Xu J, Pannetier N, Raj A. PMID: 32618082; PMCID: PMC9164168.
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PubMed Mentions: Fields:
Translation:
Humans
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Origins of atrophy in Parkinson linked to early onset and local transcription patterns. Brain Commun. 2020; 2(2):fcaa065.
Maia PD, Pandya S, Freeze B, Torok J, Gupta A, Zeighami Y, Raj A. PMID: 32954322; PMCID: PMC7472895.
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PubMed Mentions:
4
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Network mediation of pathology pattern in sporadic Creutzfeldt-Jakob disease. Brain Commun. 2020; 2(1):fcaa060.
Freeze B, Maia P, Pandya S, Raj A. PMID: 32954308; PMCID: PMC7425363.
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PubMed Mentions:
2
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Spectral graph theory of brain oscillations. Hum Brain Mapp. 2020 08 01; 41(11):2980-2998.
Raj A, Cai C, Xie X, Palacios E, Owen J, Mukherjee P, Nagarajan S. PMID: 32202027; PMCID: PMC7336150.
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PubMed Mentions:
25 Fields:
Translation:
Humans
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Stereotaxic Diffusion Tensor Imaging White Matter Atlas for the in vivo Domestic Feline Brain. Front Neuroanat. 2020; 14:1.
Johnson PJ, Pascalau R, Luh WM, Raj A, Cerda-Gonzalez S, Barry EF. PMID: 32116572; PMCID: PMC7026623.
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PubMed Mentions:
5
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Dynamical Role of Pivotal Brain Regions in Parkinson Symptomatology Uncovered with Deep Learning. Brain Sci. 2020 Jan 30; 10(2).
Nguyen AA, Maia PD, Gao X, F Damasceno P, Raj A. PMID: 32019067; PMCID: PMC7071401.
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PubMed Mentions:
4
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Neural connectivity predicts spreading of alpha-synuclein pathology in fibril-injected mouse models: Involvement of retrograde and anterograde axonal propagation. Neurobiol Dis. 2020 02; 134:104623.
Mezias C, Rey N, Brundin P, Raj A. PMID: 31628991; PMCID: PMC7138530.
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PubMed Mentions:
37 Fields:
Translation:
AnimalsCells
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Regional transcriptional architecture of Parkinson's disease pathogenesis and network spread. Brain. 2019 10 01; 142(10):3072-3085.
Freeze B, Pandya S, Zeighami Y, Raj A. PMID: 31359041; PMCID: PMC8979338.
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PubMed Mentions:
17 Fields:
Translation:
HumansCells
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Longitudinal increases in structural connectome segregation and functional connectome integration are associated with better recovery after mild TBI. Hum Brain Mapp. 2019 10 15; 40(15):4441-4456.
Kuceyeski AF, Jamison KW, Owen JP, Raj A, Mukherjee P. PMID: 31294921; PMCID: PMC6865536.
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PubMed Mentions:
22 Fields:
Translation:
Humans
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Slow-gamma frequencies are optimally guarded against effects of neurodegenerative diseases and traumatic brain injuries. J Comput Neurosci. 2019 08; 47(1):1-16.
Maia PD, Raj A, Kutz JN. PMID: 31165337.
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PubMed Mentions:
3 Fields:
Translation:
HumansAnimalsCells
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Editorial: Network Spread Models of Neurodegenerative Diseases. Front Neurol. 2018; 9:1159.
Raj A, Iturria-Medina Y. PMID: 30671020; PMCID: PMC6331437.
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PubMed Mentions:
3
-
Normal diffusivity of the domestic feline brain. J Comp Neurol. 2019 04 01; 527(5):1012-1023.
Barry EF, Cerda-Gonzalez S, Luh WM, Daws RE, Raj A, Johnson PJ. PMID: 30298687.
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PubMed Mentions:
1 Fields:
Translation:
Animals
-
Models of Network Spread and Network Degeneration in Brain Disorders. Biol Psychiatry Cogn Neurosci Neuroimaging. 2018 09; 3(9):788-797.
Raj A, Powell F. PMID: 30170711; PMCID: PMC6219468.
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PubMed Mentions:
28 Fields:
Translation:
Humans
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A method for inferring regional origins of neurodegeneration. Brain. 2018 03 01; 141(3):863-876.
Torok J, Maia PD, Powell F, Pandya S, Raj A. PMID: 29409009; PMCID: PMC5837438.
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PubMed Mentions:
26 Fields:
Translation:
HumansCells
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Functional brain connectivity is predictable from anatomic network's Laplacian eigen-structure. Neuroimage. 2018 05 15; 172:728-739.
Abdelnour F, Dayan M, Devinsky O, Thesen T, Raj A. PMID: 29454104; PMCID: PMC6170160.
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PubMed Mentions:
49 Fields:
Translation:
Humans
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Regional expression of genes mediating trans-synaptic alpha-synuclein transfer predicts regional atrophy in Parkinson disease. Neuroimage Clin. 2018; 18:456-466.
Freeze B, Acosta D, Pandya S, Zhao Y, Raj A. PMID: 29868450; PMCID: PMC5984599.
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PubMed Mentions:
29 Fields:
Translation:
Humans
-
Regional vulnerability in Alzheimer's disease: The role of cell-autonomous and transneuronal processes. Alzheimers Dement. 2018 06; 14(6):797-810.
Acosta D, Powell F, Zhao Y, Raj A. PMID: 29306583; PMCID: PMC5994366.
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PubMed Mentions:
14 Fields:
Translation:
Humans
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Preserved Structural Network Organization Mediates Pathology Spread in Alzheimer's Disease Spectrum Despite Loss of White Matter Tract Integrity. J Alzheimers Dis. 2018; 65(3):747-764.
Powell F, Tosun D, Sadeghi R, Weiner M, Raj A, Alzheimer’s Disease Neuroimaging Initiative. PMID: 29578480; PMCID: PMC6152926.
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PubMed Mentions:
14 Fields:
Translation:
Humans
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Predictive Model of Spread of Progressive Supranuclear Palsy Using Directional Network Diffusion. Front Neurol. 2017; 8:692.
Pandya S, Mezias C, Raj A. PMID: 29312121; PMCID: PMC5742613.
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PubMed Mentions:
21
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Analysis of Amyloid-β Pathology Spread in Mouse Models Suggests Spread Is Driven by Spatial Proximity, Not Connectivity. Front Neurol. 2017; 8:653.
Mezias C, Raj A. PMID: 29326640; PMCID: PMC5741600.
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PubMed Mentions:
9
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Age-Related Changes in Topological Degradation of White Matter Networks and Gene Expression in Chronic Schizophrenia. Brain Connect. 2017 11; 7(9):574-589.
Powell F, LoCastro E, Acosta D, Ahmed M, O'Donoghue S, Forde N, Cannon D, Scanlon C, Rao T, McDonald C, Raj A. PMID: 28946750; PMCID: PMC5695754.
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PubMed Mentions:
3 Fields:
Translation:
Humans
-
Mature Hippocampal Neurons Require LIS1 for Synaptic Integrity: Implications for Cognition. Biol Psychiatry. 2018 03 15; 83(6):518-529.
Sudarov A, Zhang XJ, Braunstein L, LoCastro E, Singh S, Taniguchi Y, Raj A, Shi SH, Moore H, Ross ME. PMID: 29150182; PMCID: PMC5809292.
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PubMed Mentions:
6 Fields:
Translation:
AnimalsCells
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Connectivity, not region-intrinsic properties, predicts regional vulnerability to progressive tau pathology in mouse models of disease. Acta Neuropathol Commun. 2017 08 14; 5(1):61.
Mezias C, LoCastro E, Xia C, Raj A. PMID: 28807028; PMCID: PMC5556602.
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PubMed Mentions:
19 Fields:
Translation:
HumansAnimalsCells
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Brain network eigenmodes provide a robust and compact representation of the structural connectome in health and disease. PLoS Comput Biol. 2017 Jun; 13(6):e1005550.
Wang MB, Owen JP, Mukherjee P, Raj A. PMID: 28640803; PMCID: PMC5480812.
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PubMed Mentions:
27 Fields:
Translation:
Humans
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MRI Analysis of White Matter Myelin Water Content in Multiple Sclerosis: A Novel Approach Applied to Finding Correlates of Cortical Thinning. Front Neurosci. 2017; 11:284.
Dayan M, Hurtado Rúa SM, Monohan E, Fujimoto K, Pandya S, LoCastro EM, Vartanian T, Nguyen TD, Raj A, Gauthier SA. PMID: 28603479; PMCID: PMC5445177.
View in:
PubMed Mentions:
9
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The Brain's Structural Connectome Mediates the Relationship between Regional Neuroimaging Biomarkers in Alzheimer's Disease. J Alzheimers Dis. 2017; 55(4):1639-1657.
Pandya S, Kuceyeski A, Raj A, Alzheimer’s Disease Neuroimaging Initiative. PMID: 27911289.
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PubMed Mentions:
12 Fields:
Translation:
Humans
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Network Analysis on Predicting Mean Diffusivity Change at Group Level in Temporal Lobe Epilepsy. Brain Connect. 2016 10; 6(8):607-620.
Abdelnour F, Raj A, Devinsky O, Thesen T. PMID: 27405726; PMCID: PMC5069737.
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PubMed Mentions:
3 Fields:
-
Diffuse reduction of cerebral grey matter volumes in Erdheim-Chester disease. Orphanet J Rare Dis. 2016 08 02; 11(1):109.
Diamond EL, Hatzoglou V, Patel S, Abdel-Wahab O, Rampal R, Hyman DM, Holodny AI, Raj A. PMID: 27484739; PMCID: PMC4971748.
View in:
PubMed Mentions:
8 Fields:
Translation:
Humans
-
Structural connectome disruption at baseline predicts 6-months post-stroke outcome. Hum Brain Mapp. 2016 07; 37(7):2587-601.
Kuceyeski A, Navi BB, Kamel H, Raj A, Relkin N, Toglia J, Iadecola C, O'Dell M. PMID: 27016287; PMCID: PMC4905801.
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PubMed Mentions:
46 Fields:
Translation:
Humans
-
Profilometry: A new statistical framework for the characterization of white matter pathways, with application to multiple sclerosis. Hum Brain Mapp. 2016 Mar; 37(3):989-1004.
Dayan M, Monohan E, Pandya S, Kuceyeski A, Nguyen TD, Raj A, Gauthier SA. PMID: 26667008; PMCID: PMC6867537.
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PubMed Mentions:
15 Fields:
Translation:
Humans
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Relating Cortical Atrophy in Temporal Lobe Epilepsy with Graph Diffusion-Based Network Models. PLoS Comput Biol. 2015 Oct; 11(10):e1004564.
Abdelnour F, Mueller S, Raj A. PMID: 26513579; PMCID: PMC4626097.
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PubMed Mentions:
14 Fields:
Translation:
Humans
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Measuring longitudinal myelin water fraction in new multiple sclerosis lesions. Neuroimage Clin. 2015; 9:369-75.
Vargas WS, Monohan E, Pandya S, Raj A, Vartanian T, Nguyen TD, Hurtado Rúa SM, Gauthier SA. PMID: 26594620; PMCID: PMC4589846.
View in:
PubMed Mentions:
29 Fields:
Translation:
HumansCells
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Feasibility and reproducibility of whole brain myelin water mapping in 4 minutes using fast acquisition with spiral trajectory and adiabatic T2prep (FAST-T2) at 3T. Magn Reson Med. 2016 08; 76(2):456-65.
Nguyen TD, Deh K, Monohan E, Pandya S, Spincemaille P, Raj A, Wang Y, Gauthier SA. PMID: 26331978; PMCID: PMC5486993.
View in:
PubMed Mentions:
30 Fields:
Translation:
HumansCells
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Exploring the brain's structural connectome: A quantitative stroke lesion-dysfunction mapping study. Hum Brain Mapp. 2015 Jun; 36(6):2147-60.
Kuceyeski A, Navi BB, Kamel H, Relkin N, Villanueva M, Raj A, Toglia J, O'Dell M, Iadecola C. PMID: 25655204; PMCID: PMC4414746.
View in:
PubMed Mentions:
29 Fields:
Translation:
Humans
-
Network Diffusion Model of Progression Predicts Longitudinal Patterns of Atrophy and Metabolism in Alzheimer's Disease. Cell Rep. 2015 Jan 20; 10(3):359-369.
Raj A, LoCastro E, Kuceyeski A, Tosun D, Relkin N, Weiner M, Alzheimer’s Disease Neuroimaging Initiative (ADNI). PMID: 25600871; PMCID: PMC5747552.
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PubMed Mentions:
97 Fields:
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Simultaneous phase unwrapping and removal of chemical shift (SPURS) using graph cuts: application in quantitative susceptibility mapping. IEEE Trans Med Imaging. 2015 Feb; 34(2):531-40.
Dong J, Liu T, Chen F, Zhou D, Dimov A, Raj A, Cheng Q, Spincemaille P, Wang Y. PMID: 25312917.
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PubMed Mentions:
35 Fields:
Translation:
Humans
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Widespread white matter degeneration preceding the onset of dementia. Alzheimers Dement. 2015 May; 11(5):485-493.e2.
Maier-Hein KH, Westin CF, Shenton ME, Weiner MW, Raj A, Thomann P, Kikinis R, Stieltjes B, Pasternak O. PMID: 25035154; PMCID: PMC4295016.
View in:
PubMed Mentions:
48 Fields:
Translation:
HumansCells
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Multi-compartment T2 relaxometry using a spatially constrained multi-Gaussian model. PLoS One. 2014; 9(6):e98391.
Raj A, Pandya S, Shen X, LoCastro E, Nguyen TD, Gauthier SA. PMID: 24896833; PMCID: PMC4045663.
View in:
PubMed Mentions:
22 Fields:
Translation:
HumansCells
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Spatial patterns of genome-wide expression profiles reflect anatomic and fiber connectivity architecture of healthy human brain. Hum Brain Mapp. 2014 Aug; 35(8):4204-18.
Goel P, Kuceyeski A, LoCastro E, Raj A. PMID: 24677576; PMCID: PMC4283562.
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PubMed Mentions:
25 Fields:
Translation:
Humans
-
Predicting future brain tissue loss from white matter connectivity disruption in ischemic stroke. Stroke. 2014 Mar; 45(3):717-22.
Kuceyeski A, Kamel H, Navi BB, Raj A, Iadecola C. PMID: 24523041; PMCID: PMC3943489.
View in:
PubMed Mentions:
29 Fields:
Translation:
Humans
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Network diffusion accurately models the relationship between structural and functional brain connectivity networks. Neuroimage. 2014 Apr 15; 90:335-47.
Abdelnour F, Voss HU, Raj A. PMID: 24384152; PMCID: PMC3951650.
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PubMed Mentions:
114 Fields:
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Humans
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Discriminative random field segmentation of lung nodules in CT studies. Comput Math Methods Med. 2013; 2013:683216.
Liu B, Raj A. PMID: 24592283; PMCID: PMC3925502.
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Humans
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The Network Modification (NeMo) Tool: elucidating the effect of white matter integrity changes on cortical and subcortical structural connectivity. Brain Connect. 2013; 3(5):451-63.
Kuceyeski A, Maruta J, Relkin N, Raj A. PMID: 23855491; PMCID: PMC3796322.
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PubMed Mentions:
62 Fields:
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Humans
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Robust myelin quantitative imaging from multi-echo T2 MRI using edge preserving spatial priors. Med Image Comput Comput Assist Interv. 2013; 16(Pt 1):622-30.
Shen X, Nguyen TD, Gauthier SA, Raj A. PMID: 24505719.
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PubMed Mentions:
4 Fields:
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HumansCells
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Loss in connectivity among regions of the brain reward system in alcohol dependence. Hum Brain Mapp. 2013 Dec; 34(12):3129-42.
Kuceyeski A, Meyerhoff DJ, Durazzo TC, Raj A. PMID: 22815206; PMCID: PMC3931305.
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PubMed Mentions:
14 Fields:
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Humans
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Statistics of weighted brain networks reveal hierarchical organization and Gaussian degree distribution. PLoS One. 2012; 7(6):e35029.
Ivkovic M, Kuceyeski A, Raj A. PMID: 22761649; PMCID: PMC3382201.
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PubMed Mentions:
12 Fields:
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Humans
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A network diffusion model of disease progression in dementia. Neuron. 2012 Mar 22; 73(6):1204-15.
Raj A, Kuceyeski A, Weiner M. PMID: 22445347; PMCID: PMC3623298.
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PubMed Mentions:
304 Fields:
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Humans
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Linking white matter integrity loss to associated cortical regions using structural connectivity information in Alzheimer's disease and fronto-temporal dementia: the Loss in Connectivity (LoCo) score. Neuroimage. 2012 Jul 16; 61(4):1311-23.
Kuceyeski A, Zhang Y, Raj A. PMID: 22484307; PMCID: PMC3376902.
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PubMed Mentions:
14 Fields:
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HumansCells
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Bayesian algorithm using spatial priors for multiexponential T₂ relaxometry from multiecho spin echo MRI. Magn Reson Med. 2012 Nov; 68(5):1536-43.
Kumar D, Nguyen TD, Gauthier SA, Raj A. PMID: 22266707.
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PubMed Mentions:
27 Fields:
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HumansCells
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T2 prep three-dimensional spiral imaging with efficient whole brain coverage for myelin water quantification at 1.5 tesla. Magn Reson Med. 2012 Mar; 67(3):614-21.
Nguyen TD, Wisnieff C, Cooper MA, Kumar D, Raj A, Spincemaille P, Wang Y, Vartanian T, Gauthier SA. PMID: 22344579.
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PubMed Mentions:
29 Fields:
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HumansCells
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The wiring economy principle: connectivity determines anatomy in the human brain. PLoS One. 2011; 6(9):e14832.
Raj A, Chen YH. PMID: 21915250; PMCID: PMC3168442.
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PubMed Mentions:
36 Fields:
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Humans
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A pilot study of quantitative MRI measurements of ventricular volume and cortical atrophy for the differential diagnosis of normal pressure hydrocephalus. Neurol Res Int. 2012; 2012:718150.
Moore DW, Kovanlikaya I, Heier LA, Raj A, Huang C, Chu KW, Relkin NR. PMID: 21860791; PMCID: PMC3154385.
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PubMed Mentions:
18
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The generation and validation of white matter connectivity importance maps. Neuroimage. 2011 Sep 01; 58(1):109-21.
Kuceyeski A, Maruta J, Niogi SN, Ghajar J, Raj A. PMID: 21722739; PMCID: PMC3144270.
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PubMed Mentions:
24 Fields:
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Humans
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A fast Edge-preserving Bayesian reconstruction method for Parallel Imaging applications in cardiac MRI. Magn Reson Med. 2011 Jan; 65(1):184-9.
Singh G, Raj A, Kressler B, Nguyen TD, Spincemaille P, Zabih R, Wang Y. PMID: 20939095; PMCID: PMC3005027.
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PubMed Mentions:
1 Fields:
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Humans
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Spatial HARDI: improved visualization of complex white matter architecture with Bayesian spatial regularization. Neuroimage. 2011 Jan 01; 54(1):396-409.
Raj A, Hess C, Mukherjee P. PMID: 20670684; PMCID: PMC2962674.
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PubMed Mentions:
11 Fields:
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HumansCells
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Visualization and segmentation of liver tumors using dynamic contrast MRI. Annu Int Conf IEEE Eng Med Biol Soc. 2009; 2009:6985-9.
Raj A, Juluru K. PMID: 19964723.
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PubMed Mentions:
3 Fields:
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Humans
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A maximum likelihood approach to parallel imaging with coil sensitivity noise. IEEE Trans Med Imaging. 2007 Aug; 26(8):1046-57.
Raj A, Wang Y, Zabih R. PMID: 17695125.
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Humans
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Fast and stable bayesian image expansion using sparse edge priors. IEEE Trans Image Process. 2007 Apr; 16(4):1073-84.
Raj A, Thakur K. PMID: 17405438.
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PubMed Mentions: Fields:
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Bayesian parallel imaging with edge-preserving priors. Magn Reson Med. 2007 Jan; 57(1):8-21.
Raj A, Singh G, Zabih R, Kressler B, Wang Y, Schuff N, Weiner M. PMID: 17195165; PMCID: PMC2291515.
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PubMed Mentions:
17 Fields:
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Humans
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Automatic algorithm for correcting motion artifacts in time-resolved two-dimensional magnetic resonance angiography using convex projections. Magn Reson Med. 2006 Mar; 55(3):649-58.
Raj A, Zhang H, Prince MR, Wang Y, Zabih R. PMID: 16463347.
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PubMed Mentions:
2 Fields:
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Humans
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Improved signal-to-noise ratio in parallel coronary artery magnetic resonance angiography using graph cuts based Bayesian reconstruction. Conf Proc IEEE Eng Med Biol Soc. 2006; 2006:703-6.
Singh G, Nguyen T, Kressler B, Spincemaille P, Raj A, Zabih R, Wang Y. PMID: 17946852.
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Humans
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Statistical aspects of parallel imaging reconstruction. Conf Proc IEEE Eng Med Biol Soc. 2006; 2006:377-80.
Raj A, Kressler B, Singh G, Zabih R, Wang Y. PMID: 17946826.
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Humans