Douglas Arneson, PhD

Title(s)Postdoctoral Scholar, Computational Health Scienc
SchoolSchool of Medicine
Address490 Illinois Street
San Francisco CA 94158
Phone310-398-4037
ORCID ORCID Icon0000-0002-9464-2586 Additional info
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    Collapse Biography 
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    UCLA, Los AngelesB.S.2012Bioengineering
    UCLA, Los AngelesPh.D.2019Bioinformatics

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Joint cell segmentation and cell type annotation for spatial transcriptomics. Mol Syst Biol. 2021 Jun; 17(6):e10108. Littman R, Hemminger Z, Foreman R, Arneson D, Zhang G, Gómez-Pinilla F, Yang X, Wollman R. PMID: 34057817.
      View in: PubMed   Mentions:    Fields:    
    2. Single-Cell Study of Two Rat Models of Pulmonary Arterial Hypertension Reveals Connections to Human Pathobiology and Drug Repositioning. Am J Respir Crit Care Med. 2021 04 15; 203(8):1006-1022. Hong J, Arneson D, Umar S, Ruffenach G, Cunningham CM, Ahn IS, Diamante G, Bhetraratana M, Park JF, Said E, Huynh C, Le T, Medzikovic L, Humbert M, Soubrier F, Montani D, Girerd B, Trégouët DA, Channick R, Saggar R, Eghbali M, Yang X. PMID: 33021809.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimalsCells
    3. Estrogen receptor alpha in the brain mediates tamoxifen-induced changes in physiology in mice. Elife. 2021 Mar 01; 10. Zhang Z, Park JW, Ahn IS, Diamante G, Sivakumar N, Arneson D, Yang X, van Veen JE, Correa SM. PMID: 33647234.
      View in: PubMed   Mentions: 1     Fields:    
    4. Single-cell transcriptomic profiling of satellite glial cells in stellate ganglia reveals developmental and functional axial dynamics. Glia. 2021 May; 69(5):1281-1291. van Weperen VYH, Littman RJ, Arneson DV, Contreras J, Yang X, Ajijola OA. PMID: 33432730.
      View in: PubMed   Mentions:    Fields:    
    5. CovidCounties is an interactive real time tracker of the COVID19 pandemic at the level of US counties. Sci Data. 2020 11 16; 7(1):405. Arneson D, Elliott M, Mosenia A, Oskotsky B, Solodar S, Vashisht R, Zack T, Bleicher P, Butte AJ, Rudrapatna VA. PMID: 33199721.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCellsPHPublic Health
    6. MethylResolver-a method for deconvoluting bulk DNA methylation profiles into known and unknown cell contents. Commun Biol. 2020 08 03; 3(1):422. Arneson D, Yang X, Wang K. PMID: 32747663.
      View in: PubMed   Mentions:
    7. Hypothalamic estrogen receptor alpha establishes a sexually dimorphic regulatory node of energy expenditure. Nat Metab. 2020 04; 2(4):351-363. van Veen JE, Kammel LG, Bunda PC, Shum M, Reid MS, Massa MG, Arneson D, Park JW, Zhang Z, Joseph AM, Hrncir H, Liesa M, Arnold AP, Yang X, Correa SM. PMID: 32377634.
      View in: PubMed   Mentions:
    8. IDOL regulates systemic energy balance through control of neuronal VLDLR expression. Nat Metab. 2019 11; 1(11):1089-1100. Lee SD, Priest C, Bjursell M, Gao J, Arneson DV, Ahn IS, Diamante G, van Veen JE, Massa MG, Calkin AC, Kim J, Andersén H, Rajbhandari P, Porritt M, Carreras A, Ahnmark A, Seeliger F, Maxvall I, Eliasson P, Althage M, Åkerblad P, Lindén D, Cole TA, Lee R, Boyd H, Bohlooly-Y M, Correa SM, Yang X, Tontonoz P, Hong C. PMID: 32072135.
      View in: PubMed   Mentions:
    9. Single cell analysis reveals immune cell-adipocyte crosstalk regulating the transcription of thermogenic adipocytes. Elife. 2019 10 23; 8. Rajbhandari P, Arneson D, Hart SK, Ahn IS, Diamante G, Santos LC, Zaghari N, Feng AC, Thomas BJ, Vergnes L, Lee SD, Rajbhandari AK, Reue K, Smale ST, Yang X, Tontonoz P. PMID: 31644425.
      View in: PubMed   Mentions: 26     Fields:    Translation:AnimalsCells
    10. Network modeling of single-cell omics data: challenges, opportunities, and progresses. Emerg Top Life Sci. 2019 08; 3(4):379-398. Blencowe M, Arneson D, Ding J, Chen YW, Saleem Z, Yang X. PMID: 32270049.
      View in: PubMed   Mentions:
    11. Multi-omics integration reveals molecular networks and regulators of psoriasis. BMC Syst Biol. 2019 01 14; 13(1):8. Zhao Y, Jhamb D, Shu L, Arneson D, Rajpal DK, Yang X. PMID: 30642337.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    12. Single cell molecular alterations reveal target cells and pathways of concussive brain injury. Nat Commun. 2018 09 25; 9(1):3894. Arneson D, Zhang G, Ying Z, Zhuang Y, Byun HR, Ahn IS, Gomez-Pinilla F, Yang X. PMID: 30254269.
      View in: PubMed   Mentions: 31     Fields:    Translation:AnimalsCells
    13. Shared mechanisms among neurodegenerative diseases: from genetic factors to gene networks. J Genet. 2018 Jul; 97(3):795-806. Arneson D, Zhang Y, Yang X, Narayanan M. PMID: 30027910.
      View in: PubMed   Mentions: 12     Fields:    Translation:Humans
    14. Bioinformatics principles for deciphering cardiovascular diseases. Encyclopedia of Cardiovascular Research and Medicine. 2017; 1:273-292. Shu L, Arneson D, Yang X. View Publication.
    15. Multidimensional Integrative Genomics Approaches to Dissecting Cardiovascular Disease. Front Cardiovasc Med. 2017; 4:8. Arneson D, Shu L, Tsai B, Barrere-Cain R, Sun C, Yang X. PMID: 28289683.
      View in: PubMed   Mentions:
    16. Mergeomics: a web server for identifying pathological pathways, networks, and key regulators via multidimensional data integration. BMC Genomics. 2016 09 09; 17(1):722. Arneson D, Bhattacharya A, Shu L, Mäkinen VP, Yang X. PMID: 27612452.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCells
    17. Mutant NRASQ61 shares signaling similarities across various cancer types--potential implications for future therapies. Oncotarget. 2014 Sep 15; 5(17):7936-44. Vujic I, Posch C, Sanlorenzo M, Yen AJ, Tsumura A, Kwong A, Feichtenschlager V, Lai K, Arneson DV, Rappersberger K, Ortiz-Urda SM. PMID: 25277205.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCells
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