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Case-control study of the association of chronic acid suppression and social determinants of health with COVID-19 infection. Sci Rep. 2021 Oct 25; 11(1):20987.
Zhang B, Silverman AL, Bangaru S, Arneson D, Dasharathy S, Nguyen N, Rodden D, Shih J, Butte AJ, El-Nachef WN, Boland BS, Rudrapatna VA. PMID: 34697319.
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Joint cell segmentation and cell type annotation for spatial transcriptomics. Mol Syst Biol. 2021 06; 17(6):e10108.
Littman R, Hemminger Z, Foreman R, Arneson D, Zhang G, Gómez-Pinilla F, Yang X, Wollman R. PMID: 34057817.
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2 Fields:
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Single-Cell Study of Two Rat Models of Pulmonary Arterial Hypertension Reveals Connections to Human Pathobiology and Drug Repositioning. Am J Respir Crit Care Med. 2021 04 15; 203(8):1006-1022.
Hong J, Arneson D, Umar S, Ruffenach G, Cunningham CM, Ahn IS, Diamante G, Bhetraratana M, Park JF, Said E, Huynh C, Le T, Medzikovic L, Humbert M, Soubrier F, Montani D, Girerd B, Trégouët DA, Channick R, Saggar R, Eghbali M, Yang X. PMID: 33021809.
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2 Fields:
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HumansAnimalsCells
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Estrogen receptor alpha in the brain mediates tamoxifen-induced changes in physiology in mice. Elife. 2021 Mar 01; 10.
Zhang Z, Park JW, Ahn IS, Diamante G, Sivakumar N, Arneson D, Yang X, van Veen JE, Correa SM. PMID: 33647234.
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2 Fields:
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Single-cell transcriptomic profiling of satellite glial cells in stellate ganglia reveals developmental and functional axial dynamics. Glia. 2021 May; 69(5):1281-1291.
van Weperen VYH, Littman RJ, Arneson DV, Contreras J, Yang X, Ajijola OA. PMID: 33432730.
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1 Fields:
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CovidCounties is an interactive real time tracker of the COVID19 pandemic at the level of US counties. Sci Data. 2020; 1(7):405.
Arneson D, Elliott M, Mosenia A, Oskotsky B, Solodar S, Vashisht R, Zack T, Bleicher P, Butte AJ, Rudrapatna VA. View Publication.
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MethylResolver-a method for deconvoluting bulk DNA methylation profiles into known and unknown cell contents. Commun Biol. 2020 08 03; 3(1):422.
Arneson D, Yang X, Wang K. PMID: 32747663.
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5 Translation:
HumansCells
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Hypothalamic estrogen receptor alpha establishes a sexually dimorphic regulatory node of energy expenditure. Nat Metab. 2020 04; 2(4):351-363.
van Veen JE, Kammel LG, Bunda PC, Shum M, Reid MS, Massa MG, Arneson D, Park JW, Zhang Z, Joseph AM, Hrncir H, Liesa M, Arnold AP, Yang X, Correa SM. PMID: 32377634.
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7 Translation:
AnimalsCells
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IDOL regulates systemic energy balance through control of neuronal VLDLR expression. Nat Metab. 2019 11; 1(11):1089-1100.
Lee SD, Priest C, Bjursell M, Gao J, Arneson DV, Ahn IS, Diamante G, van Veen JE, Massa MG, Calkin AC, Kim J, Andersén H, Rajbhandari P, Porritt M, Carreras A, Ahnmark A, Seeliger F, Maxvall I, Eliasson P, Althage M, Åkerblad P, Lindén D, Cole TA, Lee R, Boyd H, Bohlooly-Y M, Correa SM, Yang X, Tontonoz P, Hong C. PMID: 32072135.
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1 Translation:
AnimalsCells
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Single cell analysis reveals immune cell-adipocyte crosstalk regulating the transcription of thermogenic adipocytes. Elife. 2019 10 23; 8.
Rajbhandari P, Arneson D, Hart SK, Ahn IS, Diamante G, Santos LC, Zaghari N, Feng AC, Thomas BJ, Vergnes L, Lee SD, Rajbhandari AK, Reue K, Smale ST, Yang X, Tontonoz P. PMID: 31644425.
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29 Fields:
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AnimalsCells
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Network modeling of single-cell omics data: challenges, opportunities, and progresses. Emerg Top Life Sci. 2019 08; 3(4):379-398.
Blencowe M, Arneson D, Ding J, Chen YW, Saleem Z, Yang X. PMID: 32270049.
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8 Translation:
Humans
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Multi-omics integration reveals molecular networks and regulators of psoriasis. BMC Syst Biol. 2019 01 14; 13(1):8.
Zhao Y, Jhamb D, Shu L, Arneson D, Rajpal DK, Yang X. PMID: 30642337.
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13 Fields:
Translation:
Humans
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Single cell molecular alterations reveal target cells and pathways of concussive brain injury. Nat Commun. 2018 09 25; 9(1):3894.
Arneson D, Zhang G, Ying Z, Zhuang Y, Byun HR, Ahn IS, Gomez-Pinilla F, Yang X. PMID: 30254269.
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34 Fields:
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AnimalsCells
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Shared mechanisms among neurodegenerative diseases: from genetic factors to gene networks. J Genet. 2018 Jul; 97(3):795-806.
Arneson D, Zhang Y, Yang X, Narayanan M. PMID: 30027910.
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13 Fields:
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Humans
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Bioinformatics principles for deciphering cardiovascular diseases. Encyclopedia of Cardiovascular Research and Medicine. 2017; 1:273-292.
Shu L, Arneson D, Yang X. View Publication.
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Multidimensional Integrative Genomics Approaches to Dissecting Cardiovascular Disease. Front Cardiovasc Med. 2017; 4:8.
Arneson D, Shu L, Tsai B, Barrere-Cain R, Sun C, Yang X. PMID: 28289683.
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8
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Mergeomics: a web server for identifying pathological pathways, networks, and key regulators via multidimensional data integration. BMC Genomics. 2016 09 09; 17(1):722.
Arneson D, Bhattacharya A, Shu L, Mäkinen VP, Yang X. PMID: 27612452.
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PubMed Mentions:
16 Fields:
Translation:
HumansCells
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Mutant NRASQ61 shares signaling similarities across various cancer types--potential implications for future therapies. Oncotarget. 2014 Sep 15; 5(17):7936-44.
Vujic I, Posch C, Sanlorenzo M, Yen AJ, Tsumura A, Kwong A, Feichtenschlager V, Lai K, Arneson DV, Rappersberger K, Ortiz-Urda SM. PMID: 25277205.
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15 Fields:
Translation:
HumansCells