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Jean Paul Armache, PhD

TitlePostdoctoral Scholar
InstitutionUniversity of California San Francisco
DepartmentBiochemistry and Biophysics
Address600 16th Street
San Francisco CA 94158
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Kintzer AF, Green EM, Dominik PK, Bridges M, Armache JP, Deneka D, Kim SS, Hubbell W, Kossiakoff AA, Cheng Y, Stroud RM. Structural basis for activation of voltage sensor domains in an ion channel TPC1. Proc Natl Acad Sci U S A. 2018 Sep 06. PMID: 30190435.
      View in: PubMed
    2. Nguyen NX, Armache JP, Lee C, Yang Y, Zeng W, Mootha VK, Cheng Y, Bai XC, Jiang Y. Author Correction: Cryo-EM structure of a fungal mitochondrial calcium uniporter. Nature. 2018 Aug 14. PMID: 30108362.
      View in: PubMed
    3. Heymann JB, Marabini R, Kazemi M, Sorzano COS, Holmdahl M, Mendez JH, Stagg SM, Jonic S, Palovcak E, Armache JP, Zhao J, Cheng Y, Pintilie G, Chiu W, Patwardhan A, Carazo JM. The first single particle analysis Map Challenge: A summary of the assessments. J Struct Biol. 2018 Aug 13. PMID: 30114512.
      View in: PubMed
    4. Nguyen NX, Armache JP, Lee C, Yang Y, Zeng W, Mootha VK, Cheng Y, Bai XC, Jiang Y. Cryo-EM structure of a fungal mitochondrial calcium uniporter. Nature. 2018 Jul 11. PMID: 29995855.
      View in: PubMed
    5. Zheng SQ, Palovcak E, Armache JP, Verba KA, Cheng Y, Agard DA. MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy. Nat Methods. 2017 Apr; 14(4):331-332. PMID: 28250466.
      View in: PubMed
    6. Frauenfeld J, Löving R, Armache JP, Sonnen AF, Guettou F, Moberg P, Zhu L, Jegerschöld C, Flayhan A, Briggs JA, Garoff H, Löw C, Cheng Y, Nordlund P. A saposin-lipoprotein nanoparticle system for membrane proteins. Nat Methods. 2016 Apr; 13(4):345-51. PMID: 26950744; PMCID: PMC4894539.
    7. Wu S, Armache JP, Cheng Y. Single-particle cryo-EM data acquisition by using direct electron detection camera. Microscopy (Oxf). 2016 Feb; 65(1):35-41. PMID: 26546989; PMCID: PMC4749049 [Available on 02/01/17].
    8. Paulsen CE, Armache JP, Gao Y, Cheng Y, Julius D. Structure of the TRPA1 ion channel suggests regulatory mechanisms. Nature. 2015 Sep 24; 525(7570):552. PMID: 26200340.
      View in: PubMed
    9. Paulsen CE, Armache JP, Gao Y, Cheng Y, Julius D. Structure of the TRPA1 ion channel suggests regulatory mechanisms. Nature. 2015 Apr 23; 520(7548):511-7. PMID: 25855297; PMCID: PMC4409540.
    10. Gogala M, Becker T, Beatrix B, Armache JP, Barrio-Garcia C, Berninghausen O, Beckmann R. Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion. Nature. 2014 Feb 06; 506(7486):107-10. PMID: 24499919.
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    11. Anger AM, Armache JP, Berninghausen O, Habeck M, Subklewe M, Wilson DN, Beckmann R. Structures of the human and Drosophila 80S ribosome. Nature. 2013 May 02; 497(7447):80-5. PMID: 23636399.
      View in: PubMed
    12. Armache JP, Anger AM, Márquez V, Franckenberg S, Fröhlich T, Villa E, Berninghausen O, Thomm M, Arnold GJ, Beckmann R, Wilson DN. Promiscuous behaviour of archaeal ribosomal proteins: implications for eukaryotic ribosome evolution. Nucleic Acids Res. 2013 Jan; 41(2):1284-93. PMID: 23222135; PMCID: PMC3553981.
    13. Grela P, Gajda MJ, Armache JP, Beckmann R, Krokowski D, Svergun DI, Grankowski N, Tchórzewski M. Solution structure of the natively assembled yeast ribosomal stalk determined by small-angle X-ray scattering. Biochem J. 2012 Jun 01; 444(2):205-9. PMID: 22458705.
      View in: PubMed
    14. Becker T, Franckenberg S, Wickles S, Shoemaker CJ, Anger AM, Armache JP, Sieber H, Ungewickell C, Berninghausen O, Daberkow I, Karcher A, Thomm M, Hopfner KP, Green R, Beckmann R. Structural basis of highly conserved ribosome recycling in eukaryotes and archaea. Nature. 2012 Feb 22; 482(7386):501-6. PMID: 22358840.
      View in: PubMed
    15. Jarasch A, Dziuk P, Becker T, Armache JP, Hauser A, Wilson DN, Beckmann R. The DARC site: a database of aligned ribosomal complexes. Nucleic Acids Res. 2012 Jan; 40(Database issue):D495-500. PMID: 22009674; PMCID: PMC3245104.
    16. Becker T, Armache JP, Jarasch A, Anger AM, Villa E, Sieber H, Motaal BA, Mielke T, Berninghausen O, Beckmann R. Structure of the no-go mRNA decay complex Dom34-Hbs1 bound to a stalled 80S ribosome. Nat Struct Mol Biol. 2011 Jun; 18(6):715-20. PMID: 21623367.
      View in: PubMed
    17. Márquez V, Fröhlich T, Armache JP, Sohmen D, Dönhöfer A, Mikolajka A, Berninghausen O, Thomm M, Beckmann R, Arnold GJ, Wilson DN. Proteomic characterization of archaeal ribosomes reveals the presence of novel archaeal-specific ribosomal proteins. J Mol Biol. 2011 Feb 04; 405(5):1215-32. PMID: 21134383.
      View in: PubMed
    18. Armache JP, Jarasch A, Anger AM, Villa E, Becker T, Bhushan S, Jossinet F, Habeck M, Dindar G, Franckenberg S, Marquez V, Mielke T, Thomm M, Berninghausen O, Beatrix B, Söding J, Westhof E, Wilson DN, Beckmann R. Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution. Proc Natl Acad Sci U S A. 2010 Nov 16; 107(46):19748-53. PMID: 20980660; PMCID: PMC2993355.
    19. Armache JP, Jarasch A, Anger AM, Villa E, Becker T, Bhushan S, Jossinet F, Habeck M, Dindar G, Franckenberg S, Marquez V, Mielke T, Thomm M, Berninghausen O, Beatrix B, Söding J, Westhof E, Wilson DN, Beckmann R. Localization of eukaryote-specific ribosomal proteins in a 5.5-Å cryo-EM map of the 80S eukaryotic ribosome. Proc Natl Acad Sci U S A. 2010 Nov 16; 107(46):19754-9. PMID: 20974910; PMCID: PMC2993421.
    20. Gartmann M, Blau M, Armache JP, Mielke T, Topf M, Beckmann R. Mechanism of eIF6-mediated inhibition of ribosomal subunit joining. J Biol Chem. 2010 May 14; 285(20):14848-51. PMID: 20356839; PMCID: PMC2865328.
    21. Bhushan S, Gartmann M, Halic M, Armache JP, Jarasch A, Mielke T, Berninghausen O, Wilson DN, Beckmann R. alpha-Helical nascent polypeptide chains visualized within distinct regions of the ribosomal exit tunnel. Nat Struct Mol Biol. 2010 Mar; 17(3):313-7. PMID: 20139981.
      View in: PubMed
    22. Seidelt B, Innis CA, Wilson DN, Gartmann M, Armache JP, Villa E, Trabuco LG, Becker T, Mielke T, Schulten K, Steitz TA, Beckmann R. Structural insight into nascent polypeptide chain-mediated translational stalling. Science. 2009 Dec 04; 326(5958):1412-5. PMID: 19933110; PMCID: PMC2920484.
    23. Becker T, Bhushan S, Jarasch A, Armache JP, Funes S, Jossinet F, Gumbart J, Mielke T, Berninghausen O, Schulten K, Westhof E, Gilmore R, Mandon EC, Beckmann R. Structure of monomeric yeast and mammalian Sec61 complexes interacting with the translating ribosome. Science. 2009 Dec 04; 326(5958):1369-73. PMID: 19933108; PMCID: PMC2920595.
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