Joel Babdor, PhD

Title(s)Postdoctoral Scholar, Otolaryngology
SchoolSchool of Medicine
Address505 Parnassus Avenue
San Francisco CA 94117
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    Paris Descartes University, ParisPhD.Cell and molecular biology of dendritic cells

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    Joel Babdor, PhD, is a postdoctoral researcher in the Spitzer lab. He uses high-throughput, high-dimensional technologies and computational methods to study the interactions between the human immune system and the microbiome at the systems level. He focuses on human research in healthy populations and in pathological settings where the immune system plays an important role (cancer, autoimmunity and organ transplantation).

    One of the main projects Joel has developed in the Spitzer lab is the ImmunoMicrobiome Study, an IRB-approved human research protocol, which successfully enrolled 111 healthy individuals, to perform a comprehensive analysis of the peripheral immune system, the gut/oral/skin microbiome, and the metabolome. His study is designed to assess variations of the immune system and the microbiome across time and explore the interactions between these biological compartments. As "it takes a village", Joel is collaboratively developing novel, integrative computational strategies to analyze the ImmunoMicrobiome multi-OMIC dataset.

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    ImmunoMicrobiome: Longitudinal integrative analysis of systems-level immunity and the microbiome in a healthy population
    Bakar ImmunoX - CoProject
    Role: Researcher
    Development of Tissue MicroArray-MIBI-Analysis for Topological Characterization of the Immune Landscape in Synchronous Primary and Metastatic Colorectal Cancers
    Bakar ImmunoX - CoPilot
    Role: Researcher

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Neuropilin-1 cooperates with PD-1 in CD8+ T cells predicting outcomes in melanoma patients treated with anti-PD1. iScience. 2022 Jun 17; 25(6):104353. Rossignol J, Belaid Z, Fouquet G, Guillem F, Rignault R, Milpied P, Renand A, Coman T, D'Aveni M, Dussiot M, Colin E, Levy J, Carvalho C, Goudin N, Cagnard N, Côté F, Babdor J, Bhukhai K, Polivka L, Bigorgne AE, Halse H, Marabelle A, Mouraud S, Lepelletier Y, Maciel TT, Rubio MT, Heron D, Robert C, Girault I, Lebeherec D, Scoazec JY, Moura I, Condon L, Weimershaus M, Pages F, Davoust J, Gross D, Hermine O. PMID: 35874918; PMCID: PMC9301874.
      View in: PubMed   Mentions:
    2. Mass cytometry reveals single-cell kinetics of cytotoxic lymphocyte evolution in CMV-infected renal transplant patients. Proc Natl Acad Sci U S A. 2022 02 22; 119(8). Ishiyama K, Arakawa-Hoyt J, Aguilar OA, Damm I, Towfighi P, Sigdel T, Tamaki S, Babdor J, Spitzer MH, Reed EF, Sarwal MM, Lanier LL, CMV Systems Immunobiology Group. PMID: 35181606; PMCID: PMC8872722.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    3. Black In Immuno: harnessing social media and digital platforms to connect the dots. Nat Rev Immunol. 2021 12; 21(12):756-757. Babdor J, Fan AC, Wane M, Mbiribindi B, Mobley AS, Noel JC, Kouame E. PMID: 34744170.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    4. Comprehensive Immune Monitoring of Clinical Trials to Advance Human Immunotherapy. Cell Rep. 2019 07 16; 28(3):819-831.e4. Hartmann FJ, Babdor J, Gherardini PF, Amir ED, Jones K, Sahaf B, Marquez DM, Krutzik P, O'Donnell E, Sigal N, Maecker HT, Meyer E, Spitzer MH, Bendall SC. PMID: 31315057; PMCID: PMC6656694.
      View in: PubMed   Mentions: 36     Fields:    Translation:Humans
    5. Innate Immune Signals Induce Anterograde Endosome Transport Promoting MHC Class I Cross-Presentation. Cell Rep. 2018 09 25; 24(13):3568-3581. Weimershaus M, Mauvais FX, Saveanu L, Adiko C, Babdor J, Abramova A, Montealegre S, Lawand M, Evnouchidou I, Huber KJ, Chadt A, Zwick M, Vargas P, Dussiot M, Lennon-Dumenil AM, Brocker T, Al-Hasani H, van Endert P. PMID: 30257216.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCells
    6. Human CD4- invariant NKT lymphocytes regulate graft versus host disease. Oncoimmunology. 2018; 7(11):e1470735. Coman T, Rossignol J, D'Aveni M, Fabiani B, Dussiot M, Rignault R, Babdor J, Bouillé M, Herbelin A, Coté F, Moura IC, Hermine O, Rubio MT. PMID: 30377560; PMCID: PMC6204997.
      View in: PubMed   Mentions: 10     Fields:    
    7. Impaired Transferrin Receptor Palmitoylation and Recycling in Neurodegeneration with Brain Iron Accumulation. Am J Hum Genet. 2018 02 01; 102(2):266-277. Drecourt A, Babdor J, Dussiot M, Petit F, Goudin N, Garfa-Traoré M, Habarou F, Bole-Feysot C, Nitschké P, Ottolenghi C, Metodiev MD, Serre V, Desguerre I, Boddaert N, Hermine O, Munnich A, Rötig A. PMID: 29395073; PMCID: PMC5985451.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansCells
    8. IRAP+ endosomes restrict TLR9 activation and signaling. Nat Immunol. 2017 05; 18(5):509-518. Babdor J, Descamps D, Adiko AC, Tohmé M, Maschalidi S, Evnouchidou I, Vasconcellos LR, De Luca M, Mauvais FX, Garfa-Traore M, Brinkmann MM, Chignard M, Manoury B, Saveanu L. PMID: 28319098.
      View in: PubMed   Mentions: 15     Fields:    Translation:AnimalsCells
    9. Post-paralysis tyrosine kinase inhibition with masitinib abrogates neuroinflammation and slows disease progression in inherited amyotrophic lateral sclerosis. J Neuroinflammation. 2016 07 11; 13(1):177. Trias E, Ibarburu S, Barreto-Núñez R, Babdor J, Maciel TT, Guillo M, Gros L, Dubreuil P, Díaz-Amarilla P, Cassina P, Martínez-Palma L, Moura IC, Beckman JS, Hermine O, Barbeito L. PMID: 27400786; PMCID: PMC4940876.
      View in: PubMed   Mentions: 55     Fields:    Translation:HumansAnimalsCells
    10. Intracellular Transport Routes for MHC I and Their Relevance for Antigen Cross-Presentation. Front Immunol. 2015; 6:335. Adiko AC, Babdor J, Gutiérrez-Martínez E, Guermonprez P, Saveanu L. PMID: 26191062; PMCID: PMC4489332.
      View in: PubMed   Mentions: 25     Fields:    
    11. Insulin-regulated aminopeptidase and its compartment in dendritic cells. Mol Immunol. 2013 Sep; 55(2):153-5. Saveanu L, Babdor J, Lawand M, van Endert P. PMID: 23123036.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    12. Irap is required for normal phagosome and endosome maturation in dendritic cells. Molecular Immunology. 2012 May 1; 51(1):34. Saveanu SL, Babdor BJ, Tohme TM, Maschalidi MS, Manoury MB, van Endert vP. .
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