Joshua Vasquez, MD

Title(s)Clinical Fellow, Medicine
SchoolSchool of Medicine
Address1001 Potrero Ave, #635A
San Francisco CA 94110
Phone415-476-0735
ORCID ORCID Icon0000-0002-7165-5739 Additional info
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    Collapse Biography 
    Collapse Education and Training
    University of California, San FranciscoFellowship2018Pulmonary, Critical Care, Allergy, & Sleep Medicine
    University of Colorado, DenverResidency2012Internal Medicine
    University of California, San FranciscoM.D.2009 Medicine
    University of Wisconsin, MadisonB.S.2002Molecular Biology/Genetics

    Collapse Overview 
    Collapse Overview


    Collapse Research 
    Collapse Research Activities and Funding
    The impact of the HIV reservoir on pulmonary myeloid cells: virology, phenotype, and function
    NIH K01HL140804Jan 8, 2019 - Dec 31, 2023
    Role: Principal Investigator

    Collapse ORNG Applications 
    Collapse Featured Publications

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
    Newest   |   Oldest   |   Most Cited   |   Most Discussed   |   Timeline   |   Field Summary   |   Plain Text
    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Deep Immunophenotyping Reveals Endometriosis is Marked by Dysregulation of the Mononuclear Phagocytic System in Endometrium and Peripheral Blood. bioRxiv. 2022. Júlia Vallvé-Juanico, Ashley F. George, Sushmita Sen, Reuben Thomas, Min-Gyoung Shin, Divyashree Kushnoor, Joshua J. Vásquez, Kim Chi Vo, Juan C. Irwin, Nadia R. Roan, Alexis J. Combes, Linda C. Giudice. View Publication.
    2. Comparative Analysis of Pharmacodynamics in the C3HeB/FeJ Mouse Tuberculosis Model for DprE1 Inhibitors TBA-7371, PBTZ169, and OPC-167832. Antimicrob Agents Chemother. 2021 10 18; 65(11):e0058321. Robertson GT, Ramey ME, Massoudi LM, Carter CL, Zimmerman M, Kaya F, Graham BG, Gruppo V, Hastings C, Woolhiser LK, Scott DWL, Asay BC, Eshun-Wilson F, Maidj E, Podell BK, Vásquez JJ, Lyons MA, Dartois V, Lenaerts AJ. PMID: 34370580; PMCID: PMC8522729.
      View in: PubMed   Mentions: 13     Fields:    Translation:AnimalsCells
    3. Distinctive features of SARS-CoV-2-specific T cells predict recovery from severe COVID-19. Cell Rep. 2021 07 20; 36(3):109414. Neidleman J, Luo X, George AF, McGregor M, Yang J, Yun C, Murray V, Gill G, Greene WC, Vasquez J, Lee SA, Ghosn E, Lynch KL, Roan NR. PMID: 34260965; PMCID: PMC8238659.
      View in: PubMed   Mentions: 41     Fields:    
    4. Mycobacterium tuberculosis precursor rRNA as a measure of treatment-shortening activity of drugs and regimens. Nat Commun. 2021 05 18; 12(1):2899. Walter ND, Born SEM, Robertson GT, Reichlen M, Dide-Agossou C, Ektnitphong VA, Rossmassler K, Ramey ME, Bauman AA, Ozols V, Bearrows SC, Schoolnik G, Dolganov G, Garcia B, Musisi E, Worodria W, Huang L, Davis JL, Nguyen NV, Nguyen HV, Nguyen ATV, Phan H, Wilusz C, Podell BK, Sanoussi ND, de Jong BC, Merle CS, Affolabi D, McIlleron H, Garcia-Cremades M, Maidji E, Eshun-Wilson F, Aguilar-Rodriguez B, Karthikeyan D, Mdluli K, Bansbach C, Lenaerts AJ, Savic RM, Nahid P, Vásquez JJ, Voskuil MI. PMID: 34006838; PMCID: PMC8131613.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansAnimalsCells
    5. Lower PDL1, PDL2, and AXL Expression on Lung Myeloid Cells Suggests Inflammatory Bias in Smoking and Chronic Obstructive Pulmonary Disease. Am J Respir Cell Mol Biol. 2020 12; 63(6):780-793. Vasudevan S, Vásquez JJ, Chen W, Aguilar-Rodriguez B, Niemi EC, Zeng S, Tamaki W, Nakamura MC, Arjomandi M. PMID: 32915645; PMCID: PMC7790144.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    6. Chronic obstructive pulmonary disease in HIV. Expert Rev Respir Med. 2021 01; 15(1):71-87. Byanova K, Kunisaki KM, Vasquez J, Huang L. PMID: 33167728; PMCID: PMC7856058.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansPHPublic Health
    7. SARS-CoV-2-Specific T Cells Exhibit Phenotypic Features of Helper Function, Lack of Terminal Differentiation, and High Proliferation Potential. Cell Rep Med. 2020 09 22; 1(6):100081. Neidleman J, Luo X, Frouard J, Xie G, Gill G, Stein ES, McGregor M, Ma T, George AF, Kosters A, Greene WC, Vasquez J, Ghosn E, Lee S, Roan NR. PMID: 32839763; PMCID: PMC7437502.
      View in: PubMed   Mentions: 114     Fields:    
    8. Novel In Situ Hybridization and Multiplex Immunofluorescence Technology Combined With Whole-slide Digital Image Analysis in Kidney Transplantation. J Histochem Cytochem. 2020 07; 68(7):445-459. Junger H, Dobi D, Chen A, Lee L, Vasquez JJ, Tang Q, Laszik ZG. PMID: 32609561; PMCID: PMC7350082.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    9. Participating in Human Immunodeficiency Virus Cure Research at the End of Life. Clin Infect Dis. 2019 08 30; 69(6):1068-1070. Vásquez JJ, Hunt PW. PMID: 30715193; PMCID: PMC6736147.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    10. CD32-RNA Co-localizes with HIV-RNA in CD3+ Cells Found within Gut Tissues from Viremic and ART-Suppressed Individuals. Pathog Immun. 2019; 4(1):147-160. Vásquez JJ, Aguilar-Rodriguez BL, Rodriguez L, Hogan LE, Somsouk M, McCune JM, Deeks SG, Laszik ZG, Hunt PW, Henrich TJ. PMID: 31139759; PMCID: PMC6508427.
      View in: PubMed   Mentions: 6  
    11. Increased HIV-1 transcriptional activity and infectious burden in peripheral blood and gut-associated CD4+ T cells expressing CD30. PLoS Pathog. 2018 02; 14(2):e1006856. Hogan LE, Vasquez J, Hobbs KS, Hanhauser E, Aguilar-Rodriguez B, Hussien R, Thanh C, Gibson EA, Carvidi AB, Smith LCB, Khan S, Trapecar M, Sanjabi S, Somsouk M, Stoddart CA, Kuritzkes DR, Deeks SG, Henrich TJ. PMID: 29470552; PMCID: PMC5823470.
      View in: PubMed   Mentions: 46     Fields:    Translation:HumansCells
    12. Elucidating the Burden of HIV in Tissues Using Multiplexed Immunofluorescence and In Situ Hybridization: Methods for the Single-Cell Phenotypic Characterization of Cells Harboring HIV In Situ. J Histochem Cytochem. 2018 06; 66(6):427-446. Vasquez JJ, Hussien R, Aguilar-Rodriguez B, Junger H, Dobi D, Henrich TJ, Thanh C, Gibson E, Hogan LE, McCune J, Hunt PW, Stoddart CA, Laszik ZG. PMID: 29462571; PMCID: PMC5977441.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    13. Mass Cytometric Analysis of HIV Entry, Replication, and Remodeling in Tissue CD4+ T Cells. Cell Rep. 2017 07 25; 20(4):984-998. Cavrois M, Banerjee T, Mukherjee G, Raman N, Hussien R, Rodriguez BA, Vasquez J, Spitzer MH, Lazarus NH, Jones JJ, Ochsenbauer C, McCune JM, Butcher EC, Arvin AM, Sen N, Greene WC, Roan NR. PMID: 28746881; PMCID: PMC5560086.
      View in: PubMed   Mentions: 45     Fields:    Translation:HumansCells
    14. Blood Transcriptional Biomarkers for Active Tuberculosis among Patients in the United States: a Case-Control Study with Systematic Cross-Classifier Evaluation. J Clin Microbiol. 2016 Feb; 54(2):274-82. Walter ND, Miller MA, Vasquez J, Weiner M, Chapman A, Engle M, Higgins M, Quinones AM, Rosselli V, Canono E, Yoon C, Cattamanchi A, Davis JL, Phang T, Stearman RS, Datta G, Garcia BJ, Daley CL, Strong M, Kechris K, Fingerlin TE, Reves R, Geraci MW. PMID: 26582831; PMCID: PMC4733166.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansCells
    15. Evaluating tuberculosis case detection via real-time monitoring of tuberculosis diagnostic services. Am J Respir Crit Care Med. 2011 Aug 01; 184(3):362-7. Davis J, Katamba A, Vasquez J, Crawford E, Sserwanga A, Kakeeto S, Kizito F, Dorsey G, den Boon S, Vittinghoff E, Huang L, Adatu F, Kamya MR, Hopewell PC, Cattamanchi A. PMID: 21471088; PMCID: PMC3175538.
      View in: PubMed   Mentions: 35     Fields:    Translation:HumansPHPublic Health
    16. Rotavirus disease burden, Nicaragua 2001-2005: defining the potential impact of a rotavirus vaccination program. Int J Infect Dis. 2010 Jul; 14(7):e592-5. Amador JJ, Vasquez J, Orozco M, Pedreira C, Malespin O, De Oliveira LH, Tate J, Parashar U, Patel M. PMID: 20022778.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansPHPublic Health
    17. Uptake of rotavirus vaccine and national trends of acute gastroenteritis among children in Nicaragua. J Infect Dis. 2009 Nov 01; 200 Suppl 1:S125-30. Orozco M, Vasquez J, Pedreira C, De Oliveira LH, Amador JJ, Malespin O, Andrus J, Tate J, Parashar U, Patel M. PMID: 19821709.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansPHPublic Health
    18. Compromised B cell responses to influenza vaccination in HIV-infected individuals. J Infect Dis. 2005 May 01; 191(9):1442-50. Malaspina A, Moir S, Orsega SM, Vasquez J, Miller NJ, Donoghue ET, Kottilil S, Gezmu M, Follmann D, Vodeiko GM, Levandowski RA, Mican JM, Fauci AS. PMID: 15809902.
      View in: PubMed   Mentions: 101     Fields:    Translation:HumansCells
    19. Decreased survival of B cells of HIV-viremic patients mediated by altered expression of receptors of the TNF superfamily. J Exp Med. 2004 Sep 06; 200(5):587-99. Moir S, Malaspina A, Pickeral OK, Donoghue ET, Vasquez J, Miller NJ, Krishnan SR, Planta MA, Turney JF, Justement JS, Kottilil S, Dybul M, Mican JM, Kovacs C, Chun TW, Birse CE, Fauci AS. PMID: 15353552; PMCID: PMC2262955.
      View in: PubMed   Mentions: 94     Fields:    Translation:HumansCells
    20. Major histocompatibility complex class I alleles associated with slow simian immunodeficiency virus disease progression bind epitopes recognized by dominant acute-phase cytotoxic-T-lymphocyte responses. J Virol. 2003 Aug; 77(16):9029-40. O'Connor DH, Mothe BR, Weinfurter JT, Fuenger S, Rehrauer WM, Jing P, Rudersdorf RR, Liebl ME, Krebs K, Vasquez J, Dodds E, Loffredo J, Martin S, McDermott AB, Allen TM, Wang C, Doxiadis GG, Montefiori DC, Hughes A, Burton DR, Allison DB, Wolinsky SM, Bontrop R, Picker LJ, Watkins DI. PMID: 12885919; PMCID: PMC167227.
      View in: PubMed   Mentions: 108     Fields:    Translation:AnimalsCells
    21. Perturbations in B cell responsiveness to CD4+ T cell help in HIV-infected individuals. Proc Natl Acad Sci U S A. 2003 May 13; 100(10):6057-62. Moir S, Ogwaro KM, Malaspina A, Vasquez J, Donoghue ET, Hallahan CW, Liu S, Ehler LA, Planta MA, Kottilil S, Chun TW, Fauci AS. PMID: 12730375; PMCID: PMC156325.
      View in: PubMed   Mentions: 44     Fields:    Translation:HumansCells
    22. Evaluation of initial CD4+ T cell counts in individuals with newly diagnosed human immunodeficiency virus infection, by sex and race, in urban settings. J Infect Dis. 2002 Jun 15; 185(12):1818-21. Dybul M, Bolan R, Condoluci D, Cox-Iyamu R, Redfield R, Hallahan CW, Folino M, Sathasivam K, Weisberg M, Andrews M, Hidalgo B, Vasquez J, Fauci AS. PMID: 12085332.
      View in: PubMed   Mentions: 23     Fields:    Translation:Humans
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