Joydeep Mukherjee, PhD

Title(s)Assistant Researcher, Neurological Surgery
SchoolSchool of Medicine
Address1450 3rd Street
San Francisco CA 94158
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    Title(s)UCSF Weill Institute for Neurosciences

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    1. CXCL14 Promotes a Robust Brain Tumor-Associated Immune Response in Glioma. Clin Cancer Res. 2022 07 01; 28(13):2898-2910. Kumar A, Mohamed E, Tong S, Chen K, Mukherjee J, Lim Y, Wong CM, Boosalis Z, Shai A, Pieper RO, Gupta N, Perry A, Bollen AW, Molinaro AM, Solomon DA, Shieh JTC, Phillips JJ. PMID: 35511927; PMCID: PMC9250623.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    2. Deuterium magnetic resonance spectroscopy enables noninvasive metabolic imaging of tumor burden and response to therapy in low-grade gliomas. Neuro Oncol. 2022 07 01; 24(7):1101-1112. Taglang C, Batsios G, Mukherjee J, Tran M, Gillespie AM, Hong D, Ronen SM, Artee Luchman H, Pieper RO, Viswanath P. PMID: 35091751; PMCID: PMC9248401.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    3. PKM2 Interacts With the Cdk1-CyclinB Complex to Facilitate Cell Cycle Progression in Gliomas. Front Oncol. 2022; 12:844861. Ohba S, Tang Y, Johannessen TA, Mukherjee J. PMID: 35392228; PMCID: PMC8981990.
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    4. Evaluation of antimicrobial activity of the extract of Streptomyces euryhalinus isolated from the Indian Sundarbans. Arch Microbiol. 2021 Dec 20; 204(1):34. Biswas K, Bhattarcharya D, Saha M, Mukherjee J, Karmakar S. PMID: 34927220.
      View in: PubMed   Mentions: 1     Fields:    Translation:Cells
    5. MRE11 and UBR5 Co-Operate to Suppress RNF168-Mediated Fusion of Dysfunctional Telomeres. Front Oncol. 2021; 11:772233. Tang Y, Mukherjee J, Pieper RO. PMID: 34881184; PMCID: PMC8645554.
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    6. Correction to: Bacillus rugosus sp. nov. producer of a diketopiperazine antimicrobial, isolated from marine sponge Spongia officinalis L. Antonie Van Leeuwenhoek. 2021 Sep; 114(9):1479. Bhattacharya D, de Los Santos Villalobos S, Ruiz VV, Selvin J, Mukherjee J. PMID: 34251528.
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    7. A subset of PARP inhibitors induces lethal telomere fusion in ALT-dependent tumor cells. Sci Transl Med. 2021 05 05; 13(592). Mukherjee J, Pandita A, Kamalakar C, Johannessen TC, Ohba S, Tang Y, Dalle-Ore CL, Bjerkvig R, Pieper RO. PMID: 33952676.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    8. Phosphoglycerate mutase 1 (PGAM1) overexpression promotes radio- and chemoresistance in gliomas by activating the DNA damage response. Mol Cell Oncol. 2021; 8(2):1875804. Johannessen TA, Mukherjee J. PMID: 33860077; PMCID: PMC8018509.
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    9. Non-invasive assessment of telomere maintenance mechanisms in brain tumors. Nat Commun. 2021 01 04; 12(1):92. Viswanath P, Batsios G, Mukherjee J, Gillespie AM, Larson PEZ, Luchman HA, Phillips JJ, Costello JF, Pieper RO, Ronen SM. PMID: 33397920; PMCID: PMC7782549.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    10. Bacillus rugosus sp. nov. producer of a diketopiperazine antimicrobial, isolated from marine sponge Spongia officinalis L. Antonie Van Leeuwenhoek. 2020 Nov; 113(11):1675-1687. Bhattacharya D, de Los Santos Villalobos S, Ruiz VV, Selvin J, Mukherjee J. PMID: 32939598.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    11. The Correlation of Fluorescence of Protoporphyrinogen IX and Status of Isocitrate Dehydrogenase in Gliomas. Neurosurgery. 2020 08 01; 87(2):408-417. Ohba S, Murayama K, Kuwahara K, Pareira ES, Nakae S, Nishiyama Y, Adachi K, Yamada S, Sasaki H, Yamamoto N, Abe M, Mukherjee J, Hasegawa M, Pieper RO, Hirose Y. PMID: 31833548.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    12. Patient-derived cells from recurrent tumors that model the evolution of IDH-mutant glioma. Neurooncol Adv. 2020 Jan-Dec; 2(1):vdaa088. Jones LE, Hilz S, Grimmer MR, Mazor T, Najac C, Mukherjee J, McKinney A, Chow T, Pieper RO, Ronen SM, Chang SM, Phillips JJ, Costello JF. PMID: 32904945; PMCID: PMC7462278.
      View in: PubMed   Mentions: 7  
    13. Phosphoglycerate Mutase 1 Activates DNA Damage Repair via Regulation of WIP1 Activity. Cell Rep. 2020 04 14; 31(2):107518. Ohba S, Johannessen TA, Chatla K, Yang X, Pieper RO, Mukherjee J. PMID: 32294440.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    14. Removal of Pb (II), As (III), and Cr (VI) by nitrogen-starved Papiliotrema laurentii strain RY1. J Basic Microbiol. 2019 Oct; 59(10):1016-1030. Sarkar S, Mukherjee A, Parvin R, Das S, Roy U, Ghosh S, Chaudhuri P, Roychowdhury T, Mukherjee J, Bhattacharya S, Gachhui R. PMID: 31430397.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsPHPublic Health
    15. Mutant and Wild-Type Isocitrate Dehydrogenase 1 Share Enhancing Mechanisms Involving Distinct Tyrosine Kinase Cascades in Cancer. Cancer Discov. 2019 06; 9(6):756-777. Chen D, Xia S, Wang M, Lin R, Li Y, Mao H, Aguiar M, Famulare CA, Shih AH, Brennan CW, Gao X, Pan Y, Liu S, Fan J, Jin L, Song L, Zhou A, Mukherjee J, Pieper RO, Mishra A, Peng J, Arellano M, Blum WG, Lonial S, Boggon TJ, Levine RL, Chen J. PMID: 30862724; PMCID: PMC6548588.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    16. HDAC inhibition in glioblastoma monitored by hyperpolarized 13 C MRSI. NMR Biomed. 2019 02; 32(2):e4044. Radoul M, Najac C, Viswanath P, Mukherjee J, Kelly M, Gillespie AM, Chaumeil MM, Eriksson P, Delos Santos R, Pieper RO, Ronen SM. PMID: 30561869; PMCID: PMC6545173.
      View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells
    17. U32 collagenase from Pseudoalteromonas agarivorans NW4327: Activity, structure, substrate interactions and molecular dynamics simulations. Int J Biol Macromol. 2019 Mar 01; 124:635-650. Bhattacharya S, Bhattacharya S, Gachhui R, Hazra S, Mukherjee J. PMID: 30476512.
      View in: PubMed   Mentions: 2     Fields:    Translation:Cells
    18. Neurofibromin knockdown in glioma cell lines is associated with changes in cytokine and chemokine secretion in vitro. Sci Rep. 2018 04 11; 8(1):5805. Wood MD, Mukherjee J, Pieper RO. PMID: 29643433; PMCID: PMC5895785.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    19. Mutant IDH1 Cooperates with ATRX Loss to Drive the Alternative Lengthening of Telomere Phenotype in Glioma. Cancer Res. 2018 06 01; 78(11):2966-2977. Mukherjee J, Johannessen TC, Ohba S, Chow TT, Jones L, Pandita A, Pieper RO. PMID: 29545335.
      View in: PubMed   Mentions: 34     Fields:    Translation:HumansCells
    20. Production enhancement and characterization of the polyhydroxyalkanoate produced by Natrinema ajinwuensis (as synonym) ≡ Natrinema altunense strain RM-G10. Int J Biol Macromol. 2018 Feb; 107(Pt B):1480-1490. Mahansaria R, Dhara A, Saha A, Haldar S, Mukherjee J. PMID: 28987801.
      View in: PubMed   Mentions: 8     Fields:    Translation:Cells
    21. Recent Drug Resistant Epilepsy Spectrum in Eastern India. J Epilepsy Res. 2017 Jun; 7(1):39-44. Mukherjee J, Chakraborty DP, Guha G, Bose B, Saha SP. PMID: 28775954; PMCID: PMC5540689.
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    22. Mutant IDH1 Expression Drives TERT Promoter Reactivation as Part of the Cellular Transformation Process. Cancer Res. 2016 11 15; 76(22):6680-6689. Ohba S, Mukherjee J, Johannessen TC, Mancini A, Chow TT, Wood M, Jones L, Mazor T, Marshall RE, Viswanath P, Walsh KM, Perry A, Bell RJ, Phillips JJ, Costello JF, Ronen SM, Pieper RO. PMID: 27758882; PMCID: PMC5290072.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansAnimalsCells
    23. Rapid Conversion of Mutant IDH1 from Driver to Passenger in a Model of Human Gliomagenesis. Mol Cancer Res. 2016 10; 14(10):976-983. Johannessen TA, Mukherjee J, Viswanath P, Ohba S, Ronen SM, Bjerkvig R, Pieper RO. PMID: 27430238; PMCID: PMC5065766.
      View in: PubMed   Mentions: 48     Fields:    Translation:HumansCells
    24. PKM2 uses control of HuR localization to regulate p27 and cell cycle progression in human glioblastoma cells. Int J Cancer. 2016 Jul 01; 139(1):99-111. Mukherjee J, Ohba S, See WL, Phillips JJ, Molinaro AM, Pieper RO. PMID: 26874904; PMCID: PMC6615049.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    25. Changes in pyruvate metabolism detected by magnetic resonance imaging are linked to DNA damage and serve as a sensor of temozolomide response in glioblastoma cells. Cancer Res. 2014 Dec 01; 74(23):7115-24. Park I, Mukherjee J, Ito M, Chaumeil MM, Jalbert LE, Gaensler K, Ronen SM, Nelson SJ, Pieper RO. PMID: 25320009; PMCID: PMC4253720.
      View in: PubMed   Mentions: 43     Fields:    Translation:HumansCells
    26. Mutant IDH1-driven cellular transformation increases RAD51-mediated homologous recombination and temozolomide resistance. Cancer Res. 2014 Sep 01; 74(17):4836-44. Ohba S, Mukherjee J, See WL, Pieper RO. PMID: 25035396; PMCID: PMC4154998.
      View in: PubMed   Mentions: 43     Fields:    Translation:HumansCells
    27. Role of moesin in hyaluronan induced cell migration in glioblastoma multiforme. Mol Cancer. 2013 Jul 15; 12:74. DeSouza LV, Matta A, Karim Z, Mukherjee J, Wang XS, Krakovska O, Zadeh G, Guha A, Siu KM. PMID: 23855374; PMCID: PMC3718631.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCells
    28. Early Chk1 phosphorylation is driven by temozolomide-induced, DNA double strand break- and mismatch repair-independent DNA damage. PLoS One. 2013; 8(5):e62351. Ito M, Ohba S, Gaensler K, Ronen SM, Mukherjee J, Pieper RO. PMID: 23667469; PMCID: PMC3646831.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    29. Pyruvate kinase M2 expression, but not pyruvate kinase activity, is up-regulated in a grade-specific manner in human glioma. PLoS One. 2013; 8(2):e57610. Mukherjee J, Phillips JJ, Zheng S, Wiencke J, Ronen SM, Pieper RO. PMID: 23451252; PMCID: PMC3581484.
      View in: PubMed   Mentions: 47     Fields:    Translation:HumansCells
    30. Evaluation of heterogeneous metabolic profile in an orthotopic human glioblastoma xenograft model using compressed sensing hyperpolarized 3D 13C magnetic resonance spectroscopic imaging. Magn Reson Med. 2013 Jul; 70(1):33-9. Park I, Hu S, Bok R, Ozawa T, Ito M, Mukherjee J, Phillips JJ, James CD, Pieper RO, Ronen SM, Vigneron DB, Nelson SJ. PMID: 22851374; PMCID: PMC3630274.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansAnimalsCells
    31. Sensitivity of glioblastomas to clinically available MEK inhibitors is defined by neurofibromin 1 deficiency. Cancer Res. 2012 Jul 01; 72(13):3350-9. See WL, Tan IL, Mukherjee J, Nicolaides T, Pieper RO. PMID: 22573716; PMCID: PMC4128256.
      View in: PubMed   Mentions: 46     Fields:    Translation:HumansAnimalsCells
    32. Biological response modifiers influence structure function relationship of hematopoietic stem and stromal cells in a mouse model of leukemia. Asian Pac J Cancer Prev. 2012; 13(6):2935-41. Basu K, Mukherjee J, Law S, Chaudhuri S. PMID: 22938486.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
      View in: PubMed   Mentions: 4     Fields:    
    34. Comparisons of [18F]-1-deoxy-1-fluoro-scyllo-inositol with [18F]-FDG for PET imaging of inflammation, breast and brain cancer xenografts in athymic mice. Nucl Med Biol. 2011 Oct; 38(7):953-9. McLarty K, Moran MD, Scollard DA, Chan C, Sabha N, Mukherjee J, Guha A, McLaurin J, Nitz M, Houle S, Wilson AA, Reilly RM, Vasdev N. PMID: 21982567.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansAnimalsCells
    35. Hexokinase 2 is a key mediator of aerobic glycolysis and promotes tumor growth in human glioblastoma multiforme. J Exp Med. 2011 Feb 14; 208(2):313-26. Wolf A, Agnihotri S, Micallef J, Mukherjee J, Sabha N, Cairns R, Hawkins C, Guha A. PMID: 21242296; PMCID: PMC3039857.
      View in: PubMed   Mentions: 333     Fields:    Translation:HumansCells
    36. Preclinical in vivo evaluation of rapamycin in human malignant peripheral nerve sheath explant xenograft. Int J Cancer. 2010 Jan 15; 126(2):563-71. Bhola P, Banerjee S, Mukherjee J, Balasubramanium A, Arun V, Karim Z, Burrell K, Croul S, Gutmann DH, Guha A. PMID: 19634141.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansAnimalsCells
    37. Loss of collapsin response mediator Protein1, as detected by iTRAQ analysis, promotes invasion of human gliomas expressing mutant EGFRvIII. Cancer Res. 2009 Nov 15; 69(22):8545-54. Mukherjee J, DeSouza LV, Micallef J, Karim Z, Croul S, Siu KW, Guha A. PMID: 19903856.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansCells
    38. Epidermal growth factor receptor variant III-induced glioma invasion is mediated through myristoylated alanine-rich protein kinase C substrate overexpression. Cancer Res. 2009 Oct 01; 69(19):7548-56. Micallef J, Taccone M, Mukherjee J, Croul S, Busby J, Moran MF, Guha A. PMID: 19773446.
      View in: PubMed   Mentions: 40     Fields:    Translation:HumansAnimalsCells
    39. Human schwannomas express activated platelet-derived growth factor receptors and c-kit and are growth inhibited by Gleevec (Imatinib Mesylate). Cancer Res. 2009 Jun 15; 69(12):5099-107. Mukherjee J, Kamnasaran D, Balasubramaniam A, Radovanovic I, Zadeh G, Kiehl TR, Guha A. PMID: 19509233.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCells
    40. Cancer stem cells are enriched in the side population cells in a mouse model of glioma. Cancer Res. 2008 Dec 15; 68(24):10051-9. Harris MA, Yang H, Low BE, Mukherjee J, Mukherje J, Guha A, Bronson RT, Shultz LD, Israel MA, Yun K. PMID: 19074870; PMCID: PMC2841432.
      View in: PubMed   Mentions: 77     Fields:    Translation:HumansAnimalsCells
    41. The other side of the coin: beneficiary effect of 'oxidative burst' upsurge with T11TS facilitates the elimination of glioma cells. Cell Mol Biol (Noisy-le-grand). 2007 May 30; 53(5):53-62. Ghosh A, Mukherjee J, Bhattacharjee M, Sarkar P, Acharya S, Chaudhuri S, Chaudhuri S. PMID: 17543233.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    42. A sequential scanning of the immune efficiency in astrocytoma (Grade I to Grade Iii), meningioma and secondary glioma patients with and without therapeutic scheduling. Cancer Invest. 2006 Aug-Sep; 24(5):502-13. Bhattacharjee M, Bose I, Sarkar P, Banerjee C, Dutta S, Ghosh A, Mukherjee J, Acharya S, Goswami S, Mazumdar A, Chaudhuri S, Chaudhuri S. PMID: 16939959.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    43. ENU administration causes genomic instability along with single nucleotide polymorphisms in p53 during gliomagenesis: T11TS administration demonstrated in vivo apoptosis of these genetically altered tumor cells. Cancer Biol Ther. 2006 Feb; 5(2):156-64. Mukherjee J, Ghosh A, Ghosh A, Chaudhuri S. PMID: 16357521.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    44. Immunotherapy with T11TS / S-LFA-3 specifically induces apoptosis of brain tumor cells by augmenting intracranial immune status. Anticancer Res. 2005 Jul-Aug; 25(4):2905-19. Mukherjee J, Ghosh A, Sarkar P, Mazumdar M, Banerjee C, Chaudhuri S. PMID: 16080544.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    45. T11TS/S-LFA3 induces apoptosis of the brain tumor cells: a new approach to characterise the apoptosis associated genetic changes by arbitrarily primed-PCR. Cancer Lett. 2005 May 10; 222(1):23-38. Mukherjee J, Ghosh A, Sarkar S, Mazumdar M, Sarkar P, Duttagupta AK, Chaudhuri S. PMID: 15837538.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    46. Sheep erythrocyte demonstrated better effect than IL-2 and IFN-gamma as biological response modifier against glioma in experimental model. Indian J Exp Biol. 2005 May; 43(5):414-9. Sarkar S, Ghosh A, Dutta S, Roy RU, Begum Z, Mukherjee J, Chaudhuri S, Chaudhuri S. PMID: 15900905.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    47. Advances in the biology of astrocytomas. Curr Opin Neurol. 2004 Dec; 17(6):655-62. Guha A, Mukherjee J. PMID: 15542973.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansAnimalsCells
    48. CD2-SLFA3/T11TS interaction facilitates immune activation and glioma regression by apoptosis. Cancer Biol Ther. 2004 Nov; 3(11):1121-8. Sarkar S, Ghosh A, Mukherjee J, Chaudhuri S, Chaudhuri S. PMID: 15467439.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    49. The first cross sectional survey on intracranial malignancy in Kolkata, India: reflection of the state of the art in southern West Bengal. Asian Pac J Cancer Prev. 2004 Jul-Sep; 5(3):259-67. Ghosh A, Sarkar S, Begum Z, Dutta S, Mukherjee J, Bhattacharjee M, Sarkar P, Banerjee C, Mandal M, Mazumdar A, Bhattacharjee MK, Chaudhuri S, Chaudhuri S. PMID: 15373704.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    50. Immunotherapeutic effects of T11TS/S-LFA3 against nitrosocompound mediated neural genotoxicity. Toxicol Lett. 2004 May 02; 150(3):239-57. Mukherjee J, Sarkar S, Ghosh A, Duttagupta AK, Chaudhuri S, Chaudhuri S. PMID: 15110076.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    51. Documentation of immune profile of microglia through cell surface marker study in glioma model primed by a novel cell surface glycopeptide T11TS/SLFA-3. Glycoconj J. 2004; 20(9):515-23. Begum Z, Ghosh A, Sarkar S, Mukherjee J, Mazumdar M, Sarkar P, Chaudhuri S. PMID: 15454689.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    52. A comparative analysis of immunorestoration and recovery with conventional and immunotherapeutic protocols in canine generalized demodicosis: a newer insight of immunotherapeutic efficacy of T11TS. Immunol Invest. 2004; 33(4):453-68. Sarkar P, Mukherjee J, Ghosh A, Bhattacharjee M, Mahato S, Chakraborty A, Mondal M, Banerjee C, Chaudhuri S. PMID: 15624702.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    53. Evaluation of anti-tumor property of specific and non-specific BRMs in experimental gioma by assessing the microglial cell functional and phenotypic modulations. Cancer Biol Ther. 2003 Jul-Aug; 2(4):356-63. Begum Z, Sarkar S, Mukherjee J, Ghosh A, Chaudhuri S, Chaudhuri S. PMID: 14508105.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    54. Preclinical Changes in Immunoreactivity and Cellular Architecture during the Progressive Development of Intracranial Neoplasms and an Immunotherapeutic Schedule with a Novel Biological Response Modifier, the T11TS / S-LFA3. Asian Pac J Cancer Prev. 2002; 3(4):325-337. Mukherjee J, Dutta S, Sarkar S, Begum Z, Ghosh A, Chaudhuri S, Chaudhuri S. PMID: 12716291.
      View in: PubMed   Mentions: 5     Fields:    
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