Karl Kochanowski, PhD

TitlePostdoctoral Scholar
InstitutionUniversity of California San Francisco
DepartmentPharmaceutical Chemistry
Address1700 4th St
San Francisco CA 94158
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Christodoulou D, Link H, Fuhrer T, Kochanowski K, Gerosa L, Sauer U. Reserve Flux Capacity in the Pentose Phosphate Pathway Enables Escherichia coli's Rapid Response to Oxidative Stress. Cell Syst. 2018 May 23; 6(5):569-578.e7. PMID: 29753645.
      View in: PubMed
    2. Piazza I, Kochanowski K, Cappelletti V, Fuhrer T, Noor E, Sauer U, Picotti P. A Map of Protein-Metabolite Interactions Reveals Principles of Chemical Communication. Cell. 2018 Jan 11; 172(1-2):358-372.e23. PMID: 29307493.
      View in: PubMed
    3. Kochanowski K, Gerosa L, Brunner SF, Christodoulou D, Nikolaev YV, Sauer U. Few regulatory metabolites coordinate expression of central metabolic genes in Escherichia coli. Mol Syst Biol. 2017 01 03; 13(1):903. PMID: 28049137.
      View in: PubMed
    4. Haverkorn van Rijsewijk BR, Kochanowski K, Heinemann M, Sauer U. Distinct transcriptional regulation of the two Escherichia coli transhydrogenases PntAB and UdhA. Microbiology. 2016 09; 162(9):1672-1679. PMID: 27488847.
      View in: PubMed
    5. Nikolaev YV, Kochanowski K, Link H, Sauer U, Allain FH. Systematic Identification of Protein-Metabolite Interactions in Complex Metabolite Mixtures by Ligand-Detected Nuclear Magnetic Resonance Spectroscopy. Biochemistry. 2016 05 10; 55(18):2590-600. PMID: 27065204.
      View in: PubMed
    6. Schmidt A, Kochanowski K, Vedelaar S, Ahrné E, Volkmer B, Callipo L, Knoops K, Bauer M, Aebersold R, Heinemann M. The quantitative and condition-dependent Escherichia coli proteome. Nat Biotechnol. 2016 Jan; 34(1):104-10. PMID: 26641532; PMCID: PMC4888949.
    7. Gerosa L, Haverkorn van Rijsewijk BR, Christodoulou D, Kochanowski K, Schmidt TS, Noor E, Sauer U. Pseudo-transition Analysis Identifies the Key Regulators of Dynamic Metabolic Adaptations from Steady-State Data. Cell Syst. 2015 Oct 28; 1(4):270-82. PMID: 27136056.
      View in: PubMed
    8. Kochanowski K, Sauer U, Noor E. Posttranslational regulation of microbial metabolism. Curr Opin Microbiol. 2015 Oct; 27:10-7. PMID: 26048423.
      View in: PubMed
    9. Chubukov V, Gerosa L, Kochanowski K, Sauer U. Coordination of microbial metabolism. Nat Rev Microbiol. 2014 May; 12(5):327-40. PMID: 24658329.
      View in: PubMed
    10. Gerosa L, Kochanowski K, Heinemann M, Sauer U. Dissecting specific and global transcriptional regulation of bacterial gene expression. Mol Syst Biol. 2013 Apr 16; 9:658. PMID: 23591774; PMCID: PMC3658269.
    11. Kochanowski K, Sauer U, Chubukov V. Somewhat in control--the role of transcription in regulating microbial metabolic fluxes. Curr Opin Biotechnol. 2013 Dec; 24(6):987-93. PMID: 23571096.
      View in: PubMed
    12. Link H, Kochanowski K, Sauer U. Systematic identification of allosteric protein-metabolite interactions that control enzyme activity in vivo. Nat Biotechnol. 2013 Apr; 31(4):357-61. PMID: 23455438.
      View in: PubMed
    13. Kochanowski K, Volkmer B, Gerosa L, Haverkorn van Rijsewijk BR, Schmidt A, Heinemann M. Functioning of a metabolic flux sensor in Escherichia coli. Proc Natl Acad Sci U S A. 2013 Jan 15; 110(3):1130-5. PMID: 23277571; PMCID: PMC3549114.