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Severity of COVID-19 and adverse long-term outcomes: a retrospective cohort study based on a US electronic health record database. BMJ Open. 2021 12 10; 11(12):e056284.
Jovanoski N, Chen X, Becker U, Zalocusky K, Chawla D, Tsai L, Borm M, Neighbors M, Yau V. PMID: 34893488.
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26. Risk of Post–COVID-19 Dyspnea and Interstitial Lung Disease (ILD) in a Real-World Cohort of Patients Hospitalized with COVID-19 in the United States. Open Forum Infectious Diseases. 2021 Dec 4; 8(Suppl 1):s18-s19.
Zalocusky ZK, Chawla CD, Neighbors NM, Rizzo RS, Tsai TL. .
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281. Prevalence of Influenza Co-infection in a Real-world Cohort of COVID-19 Patients in the U.S. Open Forum Infectious Diseases. 2021 Dec 4; 8(Suppl 1):s246-s246.
Chawla CD, Chen CX, Kuhlbusch KK, Zalocusky ZK, Rizzo RS. .
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322. Risk Factors for COVID-19 Disease Severity Using Electronic-Health Records in a Real-World Cohort in the United States. Open Forum Infectious Diseases. 2021 Dec 4; 8(Suppl 1):s266-s267.
Rizzo RS, Gan GR, Chawla CD, Zalocusky ZK, Chen CX, Chia CY. .
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515. Evolution of Treatment Patterns for Patients Hospitalized with COVID-19 in the United States. Open Forum Infectious Diseases. 2021 Dec 4; 8(Suppl 1):s359-s360.
Zalocusky ZK, Rizzo RS, Chawla CD, Chia CY, Kamath KT, Tsai TL. .
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Author Correction: Experimental and real-world evidence supporting the computational repurposing of bumetanide for APOE4-related Alzheimer’s disease. Nature Aging. 2021 Nov 12; 1-1.
Taubes TA, Nova NP, Zalocusky ZK, Kosti KI, Bicak BM, Zilberter ZM, Hao HY, Yoon YS, Oskotsky OT, Pineda PS, Chen CB, Aery Jones AE, Choudhary CK, Grone GB, Balestra BM, Chaudhry CF, Paranjpe PI, De Freitas DJ, Koutsodendris KN, Chen CN, Wang WC, Chang CW, An AA, Glicksberg GB, Sirota SM, Huang HY. .
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Experimental and real-world evidence supporting the computational repurposing of bumetanide for APOE4-related Alzheimer’s disease. Nature Aging. 2021 Oct 11; 1(10):932-947.
Taubes TA, Nova NP, Zalocusky ZK, Kosti KI, Bicak BM, Zilberter ZM, Hao HY, Yoon YS, Oskotsky OT, Pineda PS, Chen CB, Aery Jones AE, Choudhary CK, Grone GB, Balestra BM, Chaudhry CF, Paranjpe PI, De Freitas DJ, Koutsodendris KN, Chen CN, Wang WC, Chang CW, An AA, Glicksberg GB, Sirota SM, Huang HY. .
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Sex-Specific Cross Tissue Meta-Analysis Identifies Immune Dysregulation in Women With Alzheimer's Disease. Front Aging Neurosci. 2021; 13:735611.
Paranjpe MD, Belonwu S, Wang JK, Oskotsky T, Gupta A, Taubes A, Zalocusky KA, Paranjpe I, Glicksberg BS, Huang Y, Sirota M. PMID: 34658838; PMCID: PMC8515049.
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Neuronal ApoE upregulates MHC-I expression to drive selective neurodegeneration in Alzheimer's disease. Nat Neurosci. 2021 06; 24(6):786-798.
Zalocusky KA, Najm R, Taubes AL, Hao Y, Yoon SY, Koutsodendris N, Nelson MR, Rao A, Bennett DA, Bant J, Amornkul DJ, Xu Q, An A, Cisne-Thomson O, Huang Y. PMID: 33958804.
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3 Fields:
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HumansAnimalsCells
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In Vivo Chimeric Alzheimer's Disease Modeling of Apolipoprotein E4 Toxicity in Human Neurons. Cell Rep. 2020 07 28; 32(4):107962.
Najm R, Zalocusky KA, Zilberter M, Yoon SY, Hao Y, Koutsodendris N, Nelson M, Rao A, Taubes A, Jones EA, Huang Y. PMID: 32726626; PMCID: PMC7430173.
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3 Fields:
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HumansAnimalsCells
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An Alzheimer's-disease-protective APOE mutation. Nat Med. 2019 11; 25(11):1648-1649.
Zalocusky KA, Nelson MR, Huang Y. PMID: 31686033.
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2 Fields:
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Humans
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The 10,000 Immunomes Project: Building a Resource for Human Immunology. Cell Rep. 2018 Nov 13; 25(7):1995.
Zalocusky KA, Kan MJ, Hu Z, Dunn P, Thomson E, Wiser J, Bhattacharya S, Butte AJ. PMID: 30428364; PMCID: PMC6362995.
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6 Fields:
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A Deep Learning Model to Predict a Diagnosis of Alzheimer Disease by Using 18F-FDG PET of the Brain. Radiology. 2019 02; 290(2):456-464.
Ding Y, Sohn JH, Kawczynski MG, Trivedi H, Harnish R, Jenkins NW, Lituiev D, Copeland TP, Aboian MS, Mari Aparici C, Behr SC, Flavell RR, Huang SY, Zalocusky KA, Nardo L, Seo Y, Hawkins RA, Hernandez Pampaloni M, Hadley D, Franc BL. PMID: 30398430; PMCID: PMC6358051.
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70 Fields:
Translation:
Humans
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The 10,000 Immunomes Project: Building a Resource for Human Immunology. Cell Rep. 2018 10 09; 25(2):513-522.e3.
Zalocusky KA, Kan MJ, Hu Z, Dunn P, Thomson E, Wiser J, Bhattacharya S, Butte AJ. PMID: 30304689; PMCID: PMC6263160.
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15 Fields:
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HumansCells
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ImmPort, toward repurposing of open access immunological assay data for translational and clinical research. Sci Data. 2018 02 27; 5:180015.
Bhattacharya S, Dunn P, Thomas CG, Smith B, Schaefer H, Chen J, Hu Z, Zalocusky KA, Shankar RD, Shen-Orr SS, Thomson E, Wiser J, Butte AJ. PMID: 29485622; PMCID: PMC5827693.
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119 Fields:
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The 10,000 Immunomes Project: A Resource for Human Immunology. Journal of Allergy and Clinical Immunology. 2018 Feb 1; 141(2):ab269.
Kan KM, Zalocusky ZK, Hu HZ, Dunn DP, Thomson TE, Wiser WJ, Bhattacharya BS, Butte BA. .
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Nucleus accumbens D2R cells signal prior outcomes and control risky decision-making. Nature. 2016 Mar 31; 531(7596):642-6.
Zalocusky KA, Ramakrishnan C, Lerner TN, Davidson TJ, Knutson B, Deisseroth K. PMID: 27007845; PMCID: PMC5717318.
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68 Fields:
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HumansAnimalsCells
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Prefrontal cortical regulation of brainwide circuit dynamics and reward-related behavior. Science. 2016 Jan 01; 351(6268):aac9698.
Ferenczi EA, Zalocusky KA, Liston C, Grosenick L, Warden MR, Amatya D, Katovich K, Mehta H, Patenaude B, Ramakrishnan C, Kalanithi P, Etkin A, Knutson B, Glover GH, Deisseroth K. PMID: 26722001; PMCID: PMC4772156.
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169 Fields:
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AnimalsCells
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Intact-Brain Analyses Reveal Distinct Information Carried by SNc Dopamine Subcircuits. Cell. 2015 Jul 30; 162(3):635-47.
Lerner TN, Shilyansky C, Davidson TJ, Evans KE, Beier KT, Zalocusky KA, Crow AK, Malenka RC, Luo L, Tomer R, Deisseroth K. PMID: 26232229; PMCID: PMC4790813.
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216 Fields:
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AnimalsCells
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Natural neural projection dynamics underlying social behavior. Cell. 2014 Jun 19; 157(7):1535-51.
Gunaydin LA, Grosenick L, Finkelstein JC, Kauvar IV, Fenno LE, Adhikari A, Lammel S, Mirzabekov JJ, Airan RD, Zalocusky KA, Tye KM, Anikeeva P, Malenka RC, Deisseroth K. PMID: 24949967; PMCID: PMC4123133.
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388 Fields:
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AnimalsCells
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Targeting cells with single vectors using multiple-feature Boolean logic. Nat Methods. 2014 Jul; 11(7):763-72.
Fenno LE, Mattis J, Ramakrishnan C, Hyun M, Lee SY, He M, Tucciarone J, Selimbeyoglu A, Berndt A, Grosenick L, Zalocusky KA, Bernstein H, Swanson H, Perry C, Diester I, Boyce FM, Bass CE, Neve R, Huang ZJ, Deisseroth K. PMID: 24908100; PMCID: PMC4085277.
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163 Fields:
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HumansAnimalsCells
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Are High Pilferage Rates Influenced by Experimental Design? The Effects of Food Provisioning on Foraging Behavior. Southeastern Naturalist. 2013 Sep 1; 12(3):589-598.
Penner PJ, Zalocusky ZK, Holifield HL, Abernathy AJ, McGuff MB, Schichtl SS, Weaver WW, Moran MM. .
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Structural and molecular interrogation of intact biological systems. Nature. 2013 May 16; 497(7449):332-7.
Chung K, Wallace J, Kim SY, Kalyanasundaram S, Andalman AS, Davidson TJ, Mirzabekov JJ, Zalocusky KA, Mattis J, Denisin AK, Pak S, Bernstein H, Ramakrishnan C, Grosenick L, Gradinaru V, Deisseroth K. PMID: 23575631; PMCID: PMC4092167.
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678 Fields:
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HumansAnimals
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2 Current challenges in optogenetics. Optogenetics. 2013 Jan 16; 23-34.
Zalocusky ZK, Fenno FL, Deisseroth DK. .
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Optogenetics in the behaving rat: integration of diverse new technologies in a vital animal model. Optogenetics. 2013 Jan 8; 1:1-17.
Zalocusky ZK, Deisseroth DK. .
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Recombinase-driver rat lines: tools, techniques, and optogenetic application to dopamine-mediated reinforcement. Neuron. 2011 Dec 08; 72(5):721-33.
Witten IB, Steinberg EE, Lee SY, Davidson TJ, Zalocusky KA, Brodsky M, Yizhar O, Cho SL, Gong S, Ramakrishnan C, Stuber GD, Tye KM, Janak PH, Deisseroth K. PMID: 22153370; PMCID: PMC3282061.
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287 Fields:
Translation:
AnimalsCells