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Lorenzo Calviello, PhD

TitlePostdoctoral Scholar
InstitutionUniversity of California San Francisco
DepartmentCell and Tissue Biology
Address513 Parnassus Ave
San Francisco CA 94143
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    Collapse Biography 
    Collapse Education and Training
    University of Pisa, Pisa, ItalyBSc and MSc07/2012Molecular Cell Biology
    Humboldt University, Berlin, GermanyPhD12/2017Computational Biology

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Zappulo A, van den Bruck D, Ciolli Mattioli C, Franke V, Imami K, McShane E, Moreno-Estelles M, Calviello L, Filipchyk A, Peguero-Sanchez E, Müller T, Woehler A, Birchmeier C, Merino E, Rajewsky N, Ohler U, Mazzoni EO, Selbach M, Akalin A, Chekulaeva M. RNA localization is a key determinant of neurite-enriched proteome. Nat Commun. 2017 09 19; 8(1):583. PMID: 28928394.
      View in: PubMed
    2. Calviello L, Ohler U. Beyond Read-Counts: Ribo-seq Data Analysis to Understand the Functions of the Transcriptome. Trends Genet. 2017 10; 33(10):728-744. PMID: 28887026.
      View in: PubMed
    3. Mukherjee N, Calviello L, Hirsekorn A, de Pretis S, Pelizzola M, Ohler U. Integrative classification of human coding and noncoding genes through RNA metabolism profiles. Nat Struct Mol Biol. 2017 01; 24(1):86-96. PMID: 27870833.
      View in: PubMed
    4. Hsu PY, Calviello L, Wu HL, Li FW, Rothfels CJ, Ohler U, Benfey PN. Super-resolution ribosome profiling reveals unannotated translation events in Arabidopsis. Proc Natl Acad Sci U S A. 2016 Oct 21. PMID: 27791167.
      View in: PubMed
    5. Calviello L, Mukherjee N, Wyler E, Zauber H, Hirsekorn A, Selbach M, Landthaler M, Obermayer B, Ohler U. Detecting actively translated open reading frames in ribosome profiling data. Nat Methods. 2016 Feb; 13(2):165-70. PMID: 26657557.
      View in: PubMed
    6. Mackowiak SD, Zauber H, Bielow C, Thiel D, Kutz K, Calviello L, Mastrobuoni G, Rajewsky N, Kempa S, Selbach M, Obermayer B. Extensive identification and analysis of conserved small ORFs in animals. Genome Biol. 2015 Sep 14; 16:179. PMID: 26364619.
      View in: PubMed
    7. Calviello L, Stano P, Mavelli F, Luisi PL, Marangoni R. Quasi-cellular systems: stochastic simulation analysis at nanoscale range. BMC Bioinformatics. 2013; 14 Suppl 7:S7. PMID: 23815522.
      View in: PubMed
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