Lorenzo Calviello, PhD
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Title(s) | Postdoctoral Scholar, Cell and Tissue Biology |
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School | School of Dentistry |
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Address | 513 Parnassus Ave, HSW San Francisco CA 94143
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Phone | -- |
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ORCID
.gif) | 0000-0002-5600-0988  |
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vCard | Download vCard |
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Biography University of Pisa, Pisa, Italy | BSc and MSc | 07/2012 | Molecular Cell Biology | Humboldt University, Berlin, Germany | PhD | 12/2017 | Computational Biology |
Bibliographic
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media.
(Note that publications are often cited in additional ways that are not shown here.)
Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication.
Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication.
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Control of ribosomal protein synthesis by the Microprocessor complex. Sci Signal. 2021 Feb 23; 14(671).
Jiang X, Prabhakar A, Van der Voorn SM, Ghatpande P, Celona B, Venkataramanan S, Calviello L, Lin C, Wang W, Black BL, Floor SN, Lagna G, Hata A. PMID: 33622983.
View in: PubMed Mentions: Fields:
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Genome-Wide Analysis of Actively Translated Open Reading Frames Using RiboTaper/ORFquant. Methods Mol Biol. 2021; 2252:331-346.
Harnett D, Meerdink E, Calviello L, Sydow D, Ohler U. PMID: 33765284.
View in: PubMed Mentions:
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Quantification of translation uncovers the functions of the alternative transcriptome. Nat Struct Mol Biol. 2020 08; 27(8):717-725.
Calviello L, Hirsekorn A, Ohler U. PMID: 32601440.
View in: PubMed Mentions: Fields: Translation: HumansCells
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A SARS-CoV-2 protein interaction map reveals targets for drug repurposing. Nature. 2020 07; 583(7816):459-468.
Gordon DE, Jang GM, Bouhaddou M, Xu J, Obernier K, White KM, O'Meara MJ, Rezelj VV, Guo JZ, Swaney DL, Tummino TA, Hüttenhain R, Kaake RM, Richards AL, Tutuncuoglu B, Foussard H, Batra J, Haas K, Modak M, Kim M, Haas P, Polacco BJ, Braberg H, Fabius JM, Eckhardt M, Soucheray M, Bennett MJ, Cakir M, McGregor MJ, Li Q, Meyer B, Roesch F, Vallet T, Mac Kain A, Miorin L, Moreno E, Naing ZZC, Zhou Y, Peng S, Shi Y, Zhang Z, Shen W, Kirby IT, Melnyk JE, Chorba JS, Lou K, Dai SA, Barrio-Hernandez I, Memon D, Hernandez-Armenta C, Lyu J, Mathy CJP, Perica T, Pilla KB, Ganesan SJ, Saltzberg DJ, Rakesh R, Liu X, Rosenthal SB, Calviello L, Venkataramanan S, Liboy-Lugo J, Lin Y, Huang XP, Liu Y, Wankowicz SA, Bohn M, Safari M, Ugur FS, Koh C, Savar NS, Tran QD, Shengjuler D, Fletcher SJ, O'Neal MC, Cai Y, Chang JCJ, Broadhurst DJ, Klippsten S, Sharp PP, Wenzell NA, Kuzuoglu-Ozturk D, Wang HY, Trenker R, Young JM, Cavero DA, Hiatt J, Roth TL, Rathore U, Subramanian A, Noack J, Hubert M, Stroud RM, Frankel AD, Rosenberg OS, Verba KA, Agard DA, Ott M, Emerman M, Jura N, von Zastrow M, Verdin E, Ashworth A, Schwartz O, d'Enfert C, Mukherjee S, Jacobson M, Malik HS, Fujimori DG, Ideker T, Craik CS, Floor SN, Fraser JS, Gross JD, Sali A, Roth BL, Ruggero D, Taunton J, Kortemme T, Beltrao P, Vignuzzi M, García-Sastre A, Shokat KM, Shoichet BK, Krogan NJ. PMID: 32353859.
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Integrated proteogenomic deep sequencing and analytics accurately identify non-canonical peptides in tumor immunopeptidomes. Nat Commun. 2020 03 10; 11(1):1293.
Chong C, Müller M, Pak H, Harnett D, Huber F, Grun D, Leleu M, Auger A, Arnaud M, Stevenson BJ, Michaux J, Bilic I, Hirsekorn A, Calviello L, Simó-Riudalbas L, Planet E, Lubinski J, Bryskiewicz M, Wiznerowicz M, Xenarios I, Zhang L, Trono D, Harari A, Ohler U, Coukos G, Bassani-Sternberg M. PMID: 32157095.
View in: PubMed Mentions: 7 Fields: Translation: HumansCells
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The Translational Landscape of the Human Heart. Cell. 2019 06 27; 178(1):242-260.e29.
van Heesch S, Witte F, Schneider-Lunitz V, Schulz JF, Adami E, Faber AB, Kirchner M, Maatz H, Blachut S, Sandmann CL, Kanda M, Worth CL, Schafer S, Calviello L, Merriott R, Patone G, Hummel O, Wyler E, Obermayer B, Mücke MB, Lindberg EL, Trnka F, Memczak S, Schilling M, Felkin LE, Barton PJR, Quaife NM, Vanezis K, Diecke S, Mukai M, Mah N, Oh SJ, Kurtz A, Schramm C, Schwinge D, Sebode M, Harakalova M, Asselbergs FW, Vink A, de Weger RA, Viswanathan S, Widjaja AA, Gärtner-Rommel A, Milting H, Dos Remedios C, Knosalla C, Mertins P, Landthaler M, Vingron M, Linke WA, Seidman JG, Seidman CE, Rajewsky N, Ohler U, Cook SA, Hubner N. PMID: 31155234.
View in: PubMed Mentions: 40 Fields: Translation: HumansAnimalsCells
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RNA localization is a key determinant of neurite-enriched proteome. Nat Commun. 2017 09 19; 8(1):583.
Zappulo A, van den Bruck D, Ciolli Mattioli C, Franke V, Imami K, McShane E, Moreno-Estelles M, Calviello L, Filipchyk A, Peguero-Sanchez E, Müller T, Woehler A, Birchmeier C, Merino E, Rajewsky N, Ohler U, Mazzoni EO, Selbach M, Akalin A, Chekulaeva M. PMID: 28928394.
View in: PubMed Mentions: 33 Fields: Translation: AnimalsCells
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Beyond Read-Counts: Ribo-seq Data Analysis to Understand the Functions of the Transcriptome. Trends Genet. 2017 10; 33(10):728-744.
Calviello L, Ohler U. PMID: 28887026.
View in: PubMed Mentions: 16 Fields: Translation: Cells
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Integrative classification of human coding and noncoding genes through RNA metabolism profiles. Nat Struct Mol Biol. 2017 01; 24(1):86-96.
Mukherjee N, Calviello L, Hirsekorn A, de Pretis S, Pelizzola M, Ohler U. PMID: 27870833.
View in: PubMed Mentions: 27 Fields: Translation: HumansCells
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Super-resolution ribosome profiling reveals unannotated translation events in Arabidopsis. Proc Natl Acad Sci U S A. 2016 Nov 08; 113(45):E7126-E7135.
Hsu PY, Calviello L, Wu HL, Li FW, Rothfels CJ, Ohler U, Benfey PN. PMID: 27791167.
View in: PubMed Mentions: 35 Fields:
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On Fine Stochastic Simulations of Liposome-Encapsulated PUREsystem™. Advances in Artificial Life, Evolutionary Computation and Systems Chemistry. 2016 Jan 1; 587:146-158.
Lorenzo Calviello, Lorenzo Lazzerini-Ospri, Roberto Marangoni. .
View in: Publisher Site Mentions:
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Detecting actively translated open reading frames in ribosome profiling data. Nat Methods. 2016 Feb; 13(2):165-70.
Calviello L, Mukherjee N, Wyler E, Zauber H, Hirsekorn A, Selbach M, Landthaler M, Obermayer B, Ohler U. PMID: 26657557.
View in: PubMed Mentions: 94 Fields: Translation: HumansCells
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Extensive identification and analysis of conserved small ORFs in animals. Genome Biol. 2015 Sep 14; 16:179.
Mackowiak SD, Zauber H, Bielow C, Thiel D, Kutz K, Calviello L, Mastrobuoni G, Rajewsky N, Kempa S, Selbach M, Obermayer B. PMID: 26364619.
View in: PubMed Mentions: 37 Fields: Translation: HumansAnimalsCells
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Quasi-cellular systems: stochastic simulation analysis at nanoscale range. BMC Bioinformatics. 2013; 14 Suppl 7:S7.
Calviello L, Stano P, Mavelli F, Luisi PL, Marangoni R. PMID: 23815522.
View in: PubMed Mentions: 4 Fields: Translation: Cells
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Quasi-cellular systems: stochastic simulation analysis at nanoscale range. EMBnet journal. 2012 Apr 29; 18(A):26.
L Calviello, P Stano, F Mavelli, PL Luisi, R Marangoni. .
View in: Publisher Site Mentions:
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Year | Publications |
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2012 | 1 | 2013 | 1 | 2015 | 2 | 2016 | 3 | 2017 | 2 | 2019 | 1 | 2020 | 3 | 2021 | 2 |
This graph shows the number and percent of publications by field.
Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications.
Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written.
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This graph shows the number and percent of publications by field.
Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications.
Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written.
To see the data as text, click here.
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