Nandita Garud * UCSF Profiles

Nandita Garud, PhD

Title(s)	Postdoctoral Scholar, Gladstone Institutes
School	School of Medicine
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Publications

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.

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Garud NR, Pollard KS. Population Genetics in the Human Microbiome. Trends Genet. 2019 Nov 25. PMID: 31780057.

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Garud NR, Good BH, Hallatschek O, Pollard KS. Evolutionary dynamics of bacteria in the gut microbiome within and across hosts. PLoS Biol. 2019 01; 17(1):e3000102. PMID: 30673701.

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Battlay P, Leblanc PB, Green L, Garud NR, Schmidt JM, Fournier-Level A, Robin C. Structural Variants and Selective Sweep Foci Contribute to Insecticide Resistance in the Drosophila Genetic Reference Panel. G3 (Bethesda). 2018 11 06; 8(11):3489-3497. PMID: 30190421.

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Harris AM, Garud NR, DeGiorgio M. Detection and Classification of Hard and Soft Sweeps from Unphased Genotypes by Multilocus Genotype Identity. Genetics. 2018 12; 210(4):1429-1452. PMID: 30315068.

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Nayfach S, Rodriguez-Mueller B, Garud N, Pollard KS. An integrated metagenomics pipeline for strain profiling reveals novel patterns of bacterial transmission and biogeography. Genome Res. 2016 11; 26(11):1612-1625. PMID: 27803195.

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Garud NR, Petrov DA. Elevated Linkage Disequilibrium and Signatures of Soft Sweeps Are Common in Drosophila melanogaster. Genetics. 2016 06; 203(2):863-80. PMID: 27098909.

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Wilson BA, Garud NR, Feder AF, Assaf ZJ, Pennings PS. The population genetics of drug resistance evolution in natural populations of viral, bacterial and eukaryotic pathogens. Mol Ecol. 2016 Jan; 25(1):42-66. PMID: 26578204.

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Garud NR, Rosenberg NA. Enhancing the mathematical properties of new haplotype homozygosity statistics for the detection of selective sweeps. Theor Popul Biol. 2015 Jun; 102:94-101. PMID: 25891325.

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Garud NR, Messer PW, Buzbas EO, Petrov DA. Recent selective sweeps in North American Drosophila melanogaster show signatures of soft sweeps. PLoS Genet. 2015 Feb; 11(2):e1005004. PMID: 25706129.

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McCoy RC, Garud NR, Kelley JL, Boggs CL, Petrov DA. Genomic inference accurately predicts the timing and severity of a recent bottleneck in a nonmodel insect population. Mol Ecol. 2014 Jan; 23(1):136-50. PMID: 24237665.

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Jeanmaire Molina, Martin Sikora, Nandita Garud, Jonathan M. Flowers, Samara Rubinstein, Andy Reynolds, Pu Huang, Scott A. Jackson, Barbara A. Schaal, Carlos D. Bustamante, Adam R. Boyko, Michael D. Purugganan. Reply to Ge and Sang: A single origin of domesticated rice. Proceedings of the National Academy of Sciences. 2011 Sep 27; 108(39):e756-e756.

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Molina J, Sikora M, Garud N, Flowers JM, Rubinstein S, Reynolds A, Huang P, Jackson S, Schaal BA, Bustamante CD, Boyko AR, Purugganan MD. Molecular evidence for a single evolutionary origin of domesticated rice. Proc Natl Acad Sci U S A. 2011 May 17; 108(20):8351-6. PMID: 21536870.

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