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Olivier Morin, PhD

Title(s)Associate Professor, Radiation Oncology
SchoolSchool of Medicine
Address505 Parnassus Avenue
San Francisco CA 94117
Phone415-353-7175
EmailOlivier.Morin@ucsf.edu
ORCID ORCID Icon0000-0002-9240-5704 Additional info
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    University of California, San Francisco, San FranciscoDoctorate Student2007Bioengineering
    University of California, Berkeley, BerkeleyDoctorate Student07/2007Bioengineering
    University of California, Berkeley, BerkeleyCertificate07/2007Management of New Technologies

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    Our research laboratory creates multi-omics prediction models for personalized cancer diagnosis and treatment. I serve as the principal investigator for the MEDomics Consortium (www.medomics.ai). Our group has active research activities in quantitative imaging, natural language processing and the creation of prognostic machine learning models. Our informatics efforts use a wealth of digital information to build point-of-care artificial intelligence tools aimed at assisting physicians in the clinic. Novel algorithms are being developed to produce interpretable multi-criteria analyses tools.

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. DoseGAN: a generative adversarial network for synthetic dose prediction using attention-gated discrimination and generation. Sci Rep. 2020 Jul 06; 10(1):11073. Kearney V, Chan JW, Wang T, Perry A, Descovich M, Morin O, Yom SS, Solberg TD. PMID: 32632116.
      View in: PubMed   Mentions:    Fields:    
    2. Machine and deep learning methods for radiomics. Med Phys. 2020 Jun; 47(5):e185-e202. Avanzo M, Wei L, Stancanello J, Vallières M, Rao A, Morin O, Mattonen SA, El Naqa I. PMID: 32418336.
      View in: PubMed   Mentions: 1     Fields:    
    3. The Image Biomarker Standardization Initiative: Standardized Quantitative Radiomics for High-Throughput Image-based Phenotyping. Radiology. 2020 05; 295(2):328-338. Zwanenburg A, Vallières M, Abdalah MA, Aerts HJWL, Andrearczyk V, Apte A, Ashrafinia S, Bakas S, Beukinga RJ, Boellaard R, Bogowicz M, Boldrini L, Buvat I, Cook GJR, Davatzikos C, Depeursinge A, Desseroit MC, Dinapoli N, Dinh CV, Echegaray S, El Naqa I, Fedorov AY, Gatta R, Gillies RJ, Goh V, Götz M, Guckenberger M, Ha SM, Hatt M, Isensee F, Lambin P, Leger S, Leijenaar RTH, Lenkowicz J, Lippert F, Losnegård A, Maier-Hein KH, Morin O, Müller H, Napel S, Nioche C, Orlhac F, Pati S, Pfaehler EAG, Rahmim A, Rao AUK, Scherer J, Siddique MM, Sijtsema NM, Socarras Fernandez J, Spezi E, Steenbakkers RJHM, Tanadini-Lang S, Thorwarth D, Troost EGC, Upadhaya T, Valentini V, van Dijk LV, van Griethuysen J, van Velden FHP, Whybra P, Richter C, Löck S. PMID: 32154773.
      View in: PubMed   Mentions: 27     Fields:    Translation:Humans
    4. An Open-Source Tool for Anisotropic Radiation Therapy Planning in Neuro-oncology Using DW-MRI Tractography. Front Oncol. 2019; 9:810. Jordan K, Morin O, Wahl M, Amirbekian B, Chapman C, Owen J, Mukherjee P, Braunstein S, Henry R. PMID: 31544062.
      View in: PubMed   Mentions:
    5. Integrated models incorporating radiologic and radiomic features predict meningioma grade, local failure, and overall survival. Neurooncol Adv. 2019 May-Dec; 1(1):vdz011. Morin O, Chen WC, Nassiri F, Susko M, Magill ST, Vasudevan HN, Wu A, Vallières M, Gennatas ED, Valdes G, Pekmezci M, Alcaide-Leon P, Choudhury A, Interian Y, Mortezavi S, Turgutlu K, Bush NAO, Solberg TD, Braunstein SE, Sneed PK, Perry A, Zadeh G, McDermott MW, Villanueva-Meyer JE, Raleigh DR. PMID: 31608329.
      View in: PubMed   Mentions:
    6. Radiomics Analysis for Clinical Decision Support in Nuclear Medicine. Semin Nucl Med. 2019 09; 49(5):438-449. Ibrahim A, Vallières M, Woodruff H, Primakov S, Beheshti M, Keek S, Refaee T, Sanduleanu S, Walsh S, Morin O, Lambin P, Hustinx R, Mottaghy FM. PMID: 31470936.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    7. Stochastic frontier analysis as knowledge-based model to improve sparing of organs-at-risk for VMAT-treated prostate cancer. Phys Med Biol. 2019 04 08; 64(8):085007. Kroshko A, Morin O, Archambault L. PMID: 30818294.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    8. Optimizing beam models for dosimetric accuracy over a wide range of treatments. Phys Med. 2019 Feb; 58:47-53. Chen J, Morin O, Weethee B, Perez-Andujar A, Phillips J, Held M, Kearney V, Han DY, Cheung J, Chuang C, Valdes G, Sudhyadhom A, Solberg T. PMID: 30824149.
      View in: PubMed   Mentions:    Fields:    
    9. Erratum: "Machine learning algorithms for outcome prediction in (chemo)radiotherapy: An empirical comparison of classifiers" [Med. Phys. 45 (7), 3449-3459 (2018)]. Med Phys. 2019 Feb; 46(2):1080-1087. Deist TM, Dankers FJWM, Valdes G, Wijsman R, Hsu IC, Oberije C, Lustberg T, van Soest J, Hoebers F, Jochems A, El Naqa I, Wee L, Morin O, Raleigh DR, Bots W, Kaanders JH, Belderbos J, Kwint M, Solberg T, Monshouwer R, Bussink J, Dekker A, Lambin P. PMID: 30730570.
      View in: PubMed   Mentions: 1     Fields:    
    10. Artificial Intelligence in Radiation Oncology Imaging. Int J Radiat Oncol Biol Phys. 2018 11 15; 102(4):1159-1161. Thompson RF, Valdes G, Fuller CD, Carpenter CM, Morin O, Aneja S, Lindsay WD, Aerts HJWL, Agrimson B, Deville C, Rosenthal SA, Yu JB, Thomas CR. PMID: 30353870.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    11. Preoperative and postoperative prediction of long-term meningioma outcomes. PLoS One. 2018; 13(9):e0204161. Gennatas ED, Wu A, Braunstein SE, Morin O, Chen WC, Magill ST, Gopinath C, Villaneueva-Meyer JE, Perry A, McDermott MW, Solberg TD, Valdes G, Raleigh DR. PMID: 30235308.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    12. A Deep Look Into the Future of Quantitative Imaging in Oncology: A Statement of Working Principles and Proposal for Change. Int J Radiat Oncol Biol Phys. 2018 11 15; 102(4):1074-1082. Morin O, Vallières M, Jochems A, Woodruff HC, Valdes G, Braunstein SE, Wildberger JE, Villanueva-Meyer JE, Kearney V, Yom SS, Solberg TD, Lambin P. PMID: 30170101.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    13. Machine learning algorithms for outcome prediction in (chemo)radiotherapy: An empirical comparison of classifiers. Med Phys. 2018 Jul; 45(7):3449-3459. Deist TM, Dankers FJWM, Valdes G, Wijsman R, Hsu IC, Oberije C, Lustberg T, van Soest J, Hoebers F, Jochems A, El Naqa I, Wee L, Morin O, Raleigh DR, Bots W, Kaanders JH, Belderbos J, Kwint M, Solberg T, Monshouwer R, Bussink J, Dekker A, Lambin P. PMID: 29763967.
      View in: PubMed   Mentions: 15     Fields:    Translation:Humans
    14. Artificial intelligence in radiation oncology: A specialty-wide disruptive transformation? Radiother Oncol. 2018 12; 129(3):421-426. Thompson RF, Valdes G, Fuller CD, Carpenter CM, Morin O, Aneja S, Lindsay WD, Aerts HJWL, Agrimson B, Deville C, Rosenthal SA, Yu JB, Thomas CR. PMID: 29907338.
      View in: PubMed   Mentions: 12     Fields:    Translation:Humans
    15. Clinical Applications of Quantitative 3-Dimensional MRI Analysis for Pediatric Embryonal Brain Tumors. Int J Radiat Oncol Biol Phys. 2018 11 15; 102(4):744-756. Hara JH, Wu A, Villanueva-Meyer JE, Valdes G, Daggubati V, Mueller S, Solberg TD, Braunstein SE, Morin O, Raleigh DR. PMID: 30108003.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    16. The Future of Artificial Intelligence in Radiation Oncology. Int J Radiat Oncol Biol Phys. 2018 10 01; 102(2):247-248. Thompson RF, Valdes G, Fuller CD, Carpenter CM, Morin O, Aneja S, Lindsay WD, Aerts HJWL, Agrimson B, Deville C, Rosenthal SA, Yu JB, Thomas CR. PMID: 30191856.
      View in: PubMed   Mentions: 1     Fields:    
    17. Deep nets vs expert designed features in medical physics: An IMRT QA case study. Med Phys. 2018 Jun; 45(6):2672-2680. Interian Y, Rideout V, Kearney VP, Gennatas E, Morin O, Cheung J, Solberg T, Valdes G. PMID: 29603278.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    18. Histopathological features predictive of local control of atypical meningioma after surgery and adjuvant radiotherapy. J Neurosurg. 2018 04 06; 130(2):443-450. Chen WC, Magill ST, Wu A, Vasudevan HN, Morin O, Aghi MK, Theodosopoulos PV, Perry A, McDermott MW, Sneed PK, Braunstein SE, Raleigh DR. PMID: 29624151.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    19. Commissioning and Evaluation of an Electronic Portal Imaging Device-Based In-Vivo Dosimetry Software. Cureus. 2018 Feb 02; 10(2):e2139. Held M, Cheung J, Perez Andujar A, Husson F, Morin O. PMID: 29632749.
      View in: PubMed   Mentions:
    20. Multiple myeloma and a mischievous pacemaker: A teaching case involving irradiation of a cardiovascular implantable electronic device. Pract Radiat Oncol. 2018 Mar - Apr; 8(2):90-94. Lloyd S, Morin O, Whitman I, Raleigh D, Fogh S, Menzel P. PMID: 29331513.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    21. Identifying Voxels at Risk for Progression in Glioblastoma Based on Dosimetry, Physiologic and Metabolic MRI. Radiat Res. 2017 09; 188(3):303-313. Anwar M, Molinaro AM, Morin O, Chang SM, Haas-Kogan DA, Nelson SJ, Lupo JM. PMID: 28723274.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansPHPublic Health
    22. Characterization of the effect of a new commercial transmission detector on radiation therapy beams. Pract Radiat Oncol. 2017 Nov - Dec; 7(6):e559-e567. Cheung JP, Perez-Andujar A, Morin O. PMID: 28666901.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    23. Development and clinical evaluation of an ionization chamber array with 3.5 mm pixel pitch for quality assurance in advanced radiotherapy techniques. Med Phys. 2016 May; 43(5):2283. Togno M, Wilkens JJ, Menichelli D, Oechsner M, Perez-Andujar A, Morin O. PMID: 27147340.
      View in: PubMed   Mentions:    Fields:    
    24. An automated deformable image registration evaluation of confidence tool. Phys Med Biol. 2016 Apr 21; 61(8):N203-14. Kirby N, Chen J, Kim H, Morin O, Nie K, Pouliot J. PMID: 27025957.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    25. Assessment of image quality and dose calculation accuracy on kV CBCT, MV CBCT, and MV CT images for urgent palliative radiotherapy treatments. J Appl Clin Med Phys. 2016 03 08; 17(2):279-290. Held M, Cremers F, Sneed PK, Braunstein S, Fogh SE, Nakamura J, Barani I, Perez-Andujar A, Pouliot J, Morin O. PMID: 27074487.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    26. Feasibility of MV CBCT-based treatment planning for urgent radiation therapy: dosimetric accuracy of MV CBCT-based dose calculations. J Appl Clin Med Phys. 2015 11 08; 16(6):458-471. Held M, Sneed PK, Fogh SE, Pouliot J, Morin O. PMID: 26699575.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    27. Use of TrueBeam developer mode for imaging QA. J Appl Clin Med Phys. 2015 07 08; 16(4):322–333. Valdes G, Morin O, Valenciaga Y, Kirby N, Pouliot J, Chuang C. PMID: 26219002.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    28. Dosimetric aspects of inverse-planned modulated-arc total-body irradiation. Med Phys. 2012 Aug; 39(8):5263-71. Held M, Kirby N, Morin O, Pouliot J. PMID: 22894451.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    29. SU-E-T-556: Integration of Lung Blocks in the Inverse Planning Process of Modulated Arc Total Body Irradiation Using Cone Beam CT. Med Phys. 2012 Jun; 39(6Part18):3833. Morin O, Held M, Kirby N, Perez-Andujar A, Chuang C, Pouliot J. PMID: 28518517.
      View in: PubMed   Mentions:    Fields:    
    30. SU-E-J-96: Investigation into the Accuracy of Deformable Registration Algorithms for Use in Dose Summation: A Case Study in Combined Modalities. Med Phys. 2012 Jun; 39(6Part7):3674. Chuang C, Morin O, Pouliot J. PMID: 28519824.
      View in: PubMed   Mentions:    Fields:    
    31. SU-E-T-123: Understanding the Meaning of IMRT QA Passing Rates with a 2D Diode Array. Med Phys. 2012 Jun; 39(6Part11):3731. Perez-Andujar A, Morin O, Chuang C, Pouliot J. PMID: 28517152.
      View in: PubMed   Mentions:    Fields:    
    32. Inverse-planned modulated-arc total-body irradiation. Med Phys. 2012 May; 39(5):2761-4. Kirby N, Held M, Morin O, Fogh S, Pouliot J. PMID: 22559647.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    33. Comparison of patient megavoltage cone beam CT images acquired with an unflattened beam from a carbon target and a flattened treatment beam. Med Phys. 2010 Apr; 37(4):1737-41. Faddegon BA, Aubin M, Bani-Hashemi A, Gangadharan B, Gottschalk AR, Morin O, Sawkey D, Wu V, Yom SS. PMID: 20443494.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    34. A diamond target for megavoltage cone-beam CT. Med Phys. 2010 Mar; 37(3):1246-53. Sawkey D, Lu M, Morin O, Aubin M, Yom SS, Gottschalk AR, Bani-Hashemi A, Faddegon BA. PMID: 20384262.
      View in: PubMed   Mentions: 2     Fields:    
    35. Investigation of geometric distortions on magnetic resonance and cone beam computed tomography images used for planning and verification of high-dose rate brachytherapy cervical cancer treatment. Brachytherapy. 2010 Jul-Sep; 9(3):266-73. Aubry JF, Cheung J, Morin O, Beaulieu L, Hsu IC, Pouliot J. PMID: 20149759.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    36. Physical performance and image optimization of megavoltage cone-beam CT. Med Phys. 2009 Apr; 36(4):1421-32. Morin O, Aubry JF, Aubin M, Chen J, Descovich M, Hashemi AB, Pouliot J. PMID: 19472649.
      View in: PubMed   Mentions: 8     Fields:    Translation:Humans
    37. Correction of megavoltage cone-beam CT images of the pelvic region based on phantom measurements for dose calculation purposes. J Appl Clin Med Phys. 2009 Jan 27; 10(1):2852. Aubry JF, Cheung J, Morin O, Gottschalk A, Beaulieu L, Pouliot J. PMID: 19223832.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    38. Sci-Thurs PM: Delivery-12: Correction and calibration of megavoltage cone-beam CT images for the calculation of the dose of the day. Med Phys. 2008 Jul; 35(7Part2):3401. Aubry JF, Cheung J, Yom S, Gottschalk A, Aubin M, Morin O, Descovich M, Beaulieu L, Pouliot J. PMID: 28512819.
      View in: PubMed   Mentions:    Fields:    
    39. Focused beam-stop array for the measurement of scatter in megavoltage portal and cone beam CT imaging. Med Phys. 2008 Jun; 35(6):2452-62. Maltz JS, Gangadharan B, Vidal M, Paidi A, Bose S, Faddegon BA, Aubin M, Morin O, Pouliot J, Zheng Z, Svatos MM, Bani-Hashemi AR. PMID: 18649478.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    40. Characteristics of megavoltage cone-beam digital tomosynthesis. Med Phys. 2008 Apr; 35(4):1310-6. Descovich M, Morin O, Aubry JF, Aubin M, Chen J, Bani-Hashemi A, Pouliot J. PMID: 18491525.
      View in: PubMed   Mentions: 5     Fields:    
    41. Patient dose considerations for routine megavoltage cone-beam CT imaging. Med Phys. 2007 May; 34(5):1819-27. Morin O, Gillis A, Descovich M, Chen J, Aubin M, Aubry JF, Chen H, Gottschalk AR, Xia P, Pouliot J. PMID: 17555263.
      View in: PubMed   Mentions: 23     Fields:    Translation:Humans
    42. Dose calculation using megavoltage cone-beam CT. Int J Radiat Oncol Biol Phys. 2007 Mar 15; 67(4):1201-10. Morin O, Chen J, Aubin M, Gillis A, Aubry JF, Bose S, Chen H, Descovich M, Xia P, Pouliot J. PMID: 17336221.
      View in: PubMed   Mentions: 22     Fields:    Translation:Humans
    43. Image-guided radiotherapy using megavoltage cone-beam computed tomography for treatment of paraspinous tumors in the presence of orthopedic hardware. Int J Radiat Oncol Biol Phys. 2006 Oct 01; 66(2):323-6. Hansen EK, Larson DA, Aubin M, Chen J, Descovich M, Gillis AM, Morin O, Xia P, Pouliot J. PMID: 16965986.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    44. Dose-guided radiation therapy with megavoltage cone-beam CT. Br J Radiol. 2006 Sep; 79 Spec No 1:S87-98. Chen J, Morin O, Aubin M, Bucci MK, Chuang CF, Pouliot J. PMID: 16980688.
      View in: PubMed   Mentions: 18     Fields:    Translation:Humans
    45. The use of megavoltage cone-beam CT to complement CT for target definition in pelvic radiotherapy in the presence of hip replacement. Br J Radiol. 2006 Nov; 79(947):918-21. Aubin M, Morin O, Chen J, Gillis A, Pickett B, Aubry JF, Akazawa C, Speight J, Roach M, Pouliot J. PMID: 16916807.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    46. [Megavoltage cone-beam CT: Recent developments and clinical applications]. Cancer Radiother. 2006 Sep; 10(5):258-68. Pouliot J, Morin O, Aubin M, Aubry JF, Chen J, Speight J, Roach M. PMID: 16861025.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    47. Calibration of an amorphous-silicon flat panel portal imager for exit-beam dosimetry. Med Phys. 2006 Mar; 33(3):584-94. Chen J, Chuang CF, Morin O, Aubin M, Pouliot J. PMID: 16878562.
      View in: PubMed   Mentions: 9     Fields:    Translation:Humans
    48. Megavoltage cone-beam CT: system description and clinical applications. Med Dosim. 2006; 31(1):51-61. Morin O, Gillis A, Chen J, Aubin M, Bucci MK, Roach M, Pouliot J. PMID: 16551529.
      View in: PubMed   Mentions: 49     Fields:    Translation:Humans
    49. Low-dose megavoltage cone-beam CT for radiation therapy. Int J Radiat Oncol Biol Phys. 2005 Feb 01; 61(2):552-60. Pouliot J, Bani-Hashemi A, Chen J, Svatos M, Ghelmansarai F, Mitschke M, Aubin M, Xia P, Morin O, Bucci K, Roach M, Hernandez P, Zheng Z, Hristov D, Verhey L. PMID: 15736320.
      View in: PubMed   Mentions: 79     Fields:    Translation:HumansAnimals
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