 Ray Wang, PhD
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| Title | Postdoctoral Scholar |
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| School | UCSF School of Medicine |
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| Department | Biochemistry and Biophysics |
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| Address | 600 16th Street
San Francisco CA 94158
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| vCard | Download vCard |
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 Bibliographic
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications.
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Wang R, Song Y, Barad BA, Cheng Y, Fraser JS, DiMaio F, et al. Automated structure refinement of macromolecular assemblies from cryo-EM maps using Rosetta. Elife. 2016 Sep 26; 5. PMID: 27669148.
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Verba KA, Wang R, Arakawa A, Liu Y, Shirouzu M, Yokoyama S, Agard DA. Atomic structure of Hsp90-Cdc37-Cdk4 reveals that Hsp90 traps and stabilizes an unfolded kinase. Science. 2016 Jun 24; 352(6293):1542-7. PMID: 27339980.
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Ovchinnikov S, Park H, Kim DE, Liu Y, Wang R, Baker D. Structure prediction using sparse simulated NOE restraints with Rosetta in CASP11. Proteins. 2016 Sep; 84 Suppl 1:181-8. PMID: 26857542.
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Ovchinnikov S, Kim DE, Wang R, Liu Y, DiMaio F, Baker D. Improved de novo structure prediction in CASP11 by incorporating Co-evolution information into rosetta. Proteins. 2015 Dec 17. PMID: 26677056.
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Barad BA, Echols N, Wang R, Cheng Y, DiMaio F, Adams PD, Fraser JS. EMRinger: side chain-directed model and map validation for 3D cryo-electron microscopy. Nat Methods. 2015 Oct; 12(10):943-6. PMID: 26280328; PMCID: PMC4589481 [Available on 04/01/16].
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Blok NB, Tan D, Wang R, Penczek PA, Baker D, DiMaio F, Rapoport TA, Walz T. Unique double-ring structure of the peroxisomal Pex1/Pex6 ATPase complex revealed by cryo-electron microscopy. Proc Natl Acad Sci U S A. 2015 Jul 28; 112(30):E4017-25. PMID: 26170309; PMCID: PMC4522808 [Available on 01/28/16].
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Kudryashev M, Wang R, Brackmann M, Scherer S, Maier T, Baker D, DiMaio F, Stahlberg H, Egelman EH, Basler M. Structure of the type VI secretion system contractile sheath. Cell. 2015 Feb 26; 160(5):952-62. PMID: 25723169; PMCID: PMC4359589 [Available on 02/26/16].
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Wang R, Kudryashev M, Li X, Egelman EH, Basler M, Cheng Y, Baker D, DiMaio F. De novo protein structure determination from near-atomic-resolution cryo-EM maps. Nat Methods. 2015 Apr; 12(4):335-8. PMID: 25707029; PMCID: PMC4435692.
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Song Y, DiMaio F, Wang R, Kim D, Miles C, Brunette T, Thompson J, Baker D. High-resolution comparative modeling with RosettaCM. Structure. 2013 Oct 8; 21(10):1735-42. PMID: 24035711; PMCID: PMC3811137.
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Kim DE, Dimaio F, Yu-Ruei Wang R, Song Y, Baker D. One contact for every twelve residues allows robust and accurate topology-level protein structure modeling. Proteins. 2014 Feb; 82 Suppl 2:208-18. PMID: 23900763; PMCID: PMC4128384.
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Wang R, Han Y, Krassovsky K, Sheffler W, Tyka M, Baker D. Modeling disordered regions in proteins using Rosetta. PLoS One. 2011; 6(7):e22060. PMID: 21829444; PMCID: PMC3146542.
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Huang WL, Wang YR, Ko TP, Chia CY, Huang KF, Wang R. Crystal structure and functional analysis of the glutaminyl cyclase from Xanthomonas campestris. J Mol Biol. 2010 Aug 20; 401(3):374-88. PMID: 20558177.
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Huang KF, Wang YR, Chang EC, Chou TL, Wang R. A conserved hydrogen-bond network in the catalytic centre of animal glutaminyl cyclases is critical for catalysis. Biochem J. 2008 Apr 1; 411(1):181-90. PMID: 18072935.
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