Saki Takahashi, PhD

Title(s)Postdoctoral Scholar, Medicine
SchoolSchool of Medicine
Address1001 Potrero Ave
San Francisco CA 94110
Phone--
ORCID ORCID Icon0000-0001-5413-5507 Additional info
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    Collapse Biography 
    Collapse Education and Training
    Princeton University, Princeton, NJ, USAPhD2019Ecology & Evolutionary Biology
    Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USAScM2013Epidemiology
    Harvard College, Cambridge, MA, USAAB2011Applied Mathematics

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Long-term SARS-CoV-2-specific immune and inflammatory responses in individuals recovering from COVID-19 with and without post-acute symptoms. Cell Rep. 2021 08 10; 36(6):109518. Peluso MJ, Deitchman AN, Torres L, Iyer NS, Munter SE, Nixon CC, Donatelli J, Thanh C, Takahashi S, Hakim J, Turcios K, Janson O, Hoh R, Tai V, Hernandez Y, Fehrman EA, Spinelli MA, Gandhi M, Trinh L, Wrin T, Petropoulos CJ, Aweeka FT, Rodriguez-Barraquer I, Kelly JD, Martin JN, Deeks SG, Greenhouse B, Rutishauser RL, Henrich TJ. PMID: 34358460.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    2. SARS-CoV-2 antibody magnitude and detectability are driven by disease severity, timing, and assay. Sci Adv. 2021 Jul; 7(31). Peluso MJ, Takahashi S, Hakim J, Kelly JD, Torres L, Iyer NS, Turcios K, Janson O, Munter SE, Thanh C, Donatelli J, Nixon CC, Hoh R, Tai V, Fehrman EA, Hernandez Y, Spinelli MA, Gandhi M, Palafox MA, Vallari A, Rodgers MA, Prostko J, Hackett J, Trinh L, Wrin T, Petropoulos CJ, Chiu CY, Norris PJ, DiGermanio C, Stone M, Busch MP, Elledge SK, Zhou XX, Wells JA, Shu A, Kurtz TW, Pak JE, Wu W, Burbelo PD, Cohen JI, Rutishauser RL, Martin JN, Deeks SG, Henrich TJ, Rodriguez-Barraquer I, Greenhouse B. PMID: 34330709.
      View in: PubMed   Mentions: 5     Fields:    
    3. Citywide serosurveillance of the initial SARS-CoV-2 outbreak in San Francisco using electronic health records. Nat Commun. 2021 06 11; 12(1):3566. Routledge I, Epstein A, Takahashi S, Janson O, Hakim J, Duarte E, Turcios K, Vinden J, Sujishi K, Rangel J, Coh M, Besana L, Ho WK, Oon CY, Ong CM, Yun C, Lynch K, Wu AHB, Wu W, Karlon W, Thornborrow E, Peluso MJ, Henrich TJ, Pak JE, Briggs J, Greenhouse B, Rodriguez-Barraquer I. PMID: 34117227.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansPHPublic Health
    4. SARS-CoV-2 antibody magnitude and detectability are driven by disease severity, timing, and assay. medRxiv. 2021 Mar 05. Peluso MJ, Takahashi S, Hakim J, Kelly JD, Torres L, Iyer NS, Turcios K, Janson O, Munter SE, Thanh C, Nixon CC, Hoh R, Tai V, Fehrman EA, Hernandez Y, Spinelli MA, Gandhi M, Palafox MA, Vallari A, Rodgers MA, Prostko J, Hackett J, Trinh L, Wrin T, Petroplolous CJ, Chiu CY, Norris PJ, DiGermanio C, Stone M, Busch MP, Elledge SK, Zhou XX, Wells JA, Shu A, Kurtz TW, Pak JE, Wu W, Burbelo PD, Cohen JI, Rutishauser RL, Martin JN, Deeks SG, Henrich TJ, Rodriguez-Barraquer I, Greenhouse B. PMID: 33688675.
      View in: PubMed   Mentions:
    5. Long-Term SARS-CoV-2-Specific Immune and Inflammatory Responses Across a Clinically Diverse Cohort of Individuals Recovering from COVID-19. medRxiv. 2021 Mar 01. Peluso MJ, Deitchman AN, Torres L, Iyer NS, Nixon CC, Munter SE, Donatelli J, Thanh C, Takahashi S, Hakim J, Turcios K, Janson O, Hoh R, Tai V, Hernandez Y, Fehrman E, Spinelli MA, Gandhi M, Trinh L, Wrin T, Petropoulos CJ, Aweeka FT, Rodriguez-Barraquer I, Kelly JD, Martin JN, Deeks SG, Greenhouse B, Rutishauser RL, Henrich TJ. PMID: 33688685.
      View in: PubMed   Mentions:
    6. Citywide serosurveillance of the initial SARS-CoV-2 outbreak in San Francisco. Res Sq. 2021 Feb 04. Routledge I, Epstein A, Takahashi S, Janson O, Hakim J, Duarte E, Turcios K, Vinden J, Sujishi K, Rangel J, Coh M, Besana L, Ho WK, Oon CY, Ong CM, Yun C, Lynch K, Wu AHB, Wu W, Karlon W, Thornborrow E, Peluso MJ, Henrich TJ, Pak JE, Briggs J, Greenhouse B, Rodriguez-Barraquer I. PMID: 33564754.
      View in: PubMed   Mentions:
    7. Are Seroprevalence Estimates for Severe Acute Respiratory Syndrome Coronavirus 2 Biased? J Infect Dis. 2020 11 09; 222(11):1772-1775. Takahashi S, Greenhouse B, Rodríguez-Barraquer I. PMID: 32856712.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansPHPublic Health
    8. Universal Polymerase Chain Reaction and Antibody Testing Demonstrate Little to No Transmission of Severe Acute Respiratory Syndrome Coronavirus 2 in a Rural Community. Open Forum Infect Dis. 2021 Jan; 8(1):ofaa531. Appa A, Takahashi S, Rodriguez-Barraquer I, Chamie G, Sawyer A, Duarte E, Hakim J, Turcios K, Vinden J, Janson O, Manglik A, Peluso MJ, Deeks SG, Henrich TJ, Torres L, Rodgers M, Hackett J, Chiu C, Havlir D, Greenhouse B. PMID: 34109255.
      View in: PubMed   Mentions:
    9. Universal PCR and antibody testing demonstrate little to no transmission of SARS-CoV-2 in a rural community. medRxiv. 2020 Aug 17. Appa A, Takahashi S, Rodriguez-Barraquer I, Chamie G, Sawyer A, Consortium C, Duarte E, Hakim J, Turcios K, Vinden J, Janson O, Manglik A, Peluso MJ, Deeks SG, Henrich TJ, Torres L, Rodgers M, Hackett J, Chiu C, Havlir D, Greenhouse B. PMID: 32839781.
      View in: PubMed   Mentions:
    10. Seroepidemiologic Study Designs for Determining SARS-COV-2 Transmission and Immunity. Emerg Infect Dis. 2020 Sep; 26(9):1978-1986. Clapham H, Hay J, Routledge I, Takahashi S, Choisy M, Cummings D, Grenfell B, Metcalf CJE, Mina M, Barraquer IR, Salje H, Tam CC. PMID: 32544053.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansCellsPHPublic Health
    11. Using models to shape measles control and elimination strategies in low- and middle-income countries: A review of recent applications. Vaccine. 2020 01 29; 38(5):979-992. Cutts FT, Dansereau E, Ferrari MJ, Hanson M, McCarthy KA, Metcalf CJE, Takahashi S, Tatem AJ, Thakkar N, Truelove S, Utazi E, Wesolowski A, Winter AK. PMID: 31787412.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansPHPublic Health
    12. Mapping vaccination coverage to explore the effects of delivery mechanisms and inform vaccination strategies. Nat Commun. 2019 04 09; 10(1):1633. Utazi CE, Thorley J, Alegana VA, Ferrari MJ, Takahashi S, Metcalf CJE, Lessler J, Cutts FT, Tatem AJ. PMID: 30967543.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansPHPublic Health
    13. Seasonal gaps in measles vaccination coverage in Madagascar. Vaccine. 2019 04 24; 37(18):2511-2519. Mensah K, Heraud JM, Takahashi S, Winter AK, Metcalf CJE, Wesolowski A. PMID: 30940486.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansPHPublic Health
    14. A spatial regression model for the disaggregation of areal unit based data to high-resolution grids with application to vaccination coverage mapping. Stat Methods Med Res. 2019 Oct-Nov; 28(10-11):3226-3241. Utazi CE, Thorley J, Alegana VA, Ferrari MJ, Nilsen K, Takahashi S, Metcalf C, Lessler J, Tatem AJ. PMID: 30229698.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    15. Epidemic dynamics, interactions and predictability of enteroviruses associated with hand, foot and mouth disease in Japan. J R Soc Interface. 2018 09 12; 15(146). Takahashi S, Metcalf CJE, Arima Y, Fujimoto T, Shimizu H, Rogier van Doorn H, Le Van T, Chan YF, Farrar JJ, Oishi K, Grenfell BT. PMID: 30209044.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCellsPHPublic Health
    16. Challenges and Opportunities in Disease Forecasting in Outbreak Settings: A Case Study of Measles in Lola Prefecture, Guinea. Am J Trop Med Hyg. 2018 05; 98(5):1489-1497. Graham M, Suk JE, Takahashi S, Metcalf CJ, Jimenez AP, Prikazsky V, Ferrari MJ, Lessler J. PMID: 29532773.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansPHPublic Health
    17. The seasonality of nonpolio enteroviruses in the United States: Patterns and drivers. Proc Natl Acad Sci U S A. 2018 03 20; 115(12):3078-3083. Pons-Salort M, Oberste MS, Pallansch MA, Abedi GR, Takahashi S, Grenfell BT, Grassly NC. PMID: 29507246.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCellsPHPublic Health
    18. High resolution age-structured mapping of childhood vaccination coverage in low and middle income countries. Vaccine. 2018 03 14; 36(12):1583-1591. Utazi CE, Thorley J, Alegana VA, Ferrari MJ, Takahashi S, Metcalf CJE, Lessler J, Tatem AJ. PMID: 29454519.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansPHPublic Health
    19. The geography of measles vaccination in the African Great Lakes region. Nat Commun. 2017 05 25; 8:15585. Takahashi S, Metcalf CJE, Ferrari MJ, Tatem AJ, Lessler J. PMID: 28541287.
      View in: PubMed   Mentions: 34     Fields:    Translation:HumansPHPublic Health
    20. Demographics, epidemiology and the impact of vaccination campaigns in a measles-free world - Can elimination be maintained? Vaccine. 2017 03 13; 35(11):1488-1493. Prada JM, Metcalf CJE, Takahashi S, Lessler J, Tatem AJ, Ferrari M. PMID: 28216186.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansPHPublic Health
    21. Hand, Foot, and Mouth Disease in China: Critical Community Size and Spatial Vaccination Strategies. Sci Rep. 2016 04 29; 6:25248. Van Boeckel TP, Takahashi S, Liao Q, Xing W, Lai S, Hsiao V, Liu F, Zheng Y, Chang Z, Yuan C, Metcalf CJ, Yu H, Grenfell BT. PMID: 27125917.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansPHPublic Health
    22. Correction: Routine Pediatric Enterovirus 71 Vaccination in China: a Cost-Effectiveness Analysis. PLoS Med. 2016 Apr; 13(4):e1002013. Wu JT, Jit M, Zheng Y, Leung K, Xing W, Yang J, Liao Q, Cowling BJ, Yang B, Lau EH, Takahashi S, Farrar JJ, Grenfell BT, Leung GM, Yu H. PMID: 27050103.
      View in: PubMed   Mentions:    Fields:    
    23. Routine Pediatric Enterovirus 71 Vaccination in China: a Cost-Effectiveness Analysis. PLoS Med. 2016 Mar; 13(3):e1001975. Wu JT, Jit M, Zheng Y, Leung K, Xing W, Yang J, Liao Q, Cowling BJ, Yang B, Lau EH, Takahashi S, Farrar JJ, Grenfell BT, Leung GM, Yu H. PMID: 26978565.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansCells
    24. Hand, Foot, and Mouth Disease in China: Modeling Epidemic Dynamics of Enterovirus Serotypes and Implications for Vaccination. PLoS Med. 2016 Feb; 13(2):e1001958. Takahashi S, Liao Q, Van Boeckel TP, Xing W, Sun J, Hsiao VY, Metcalf CJ, Chang Z, Liu F, Zhang J, Wu JT, Cowling BJ, Leung GM, Farrar JJ, van Doorn HR, Grenfell BT, Yu H. PMID: 26882540.
      View in: PubMed   Mentions: 41     Fields:    Translation:HumansCellsPHPublic Health
    25. Reduced vaccination and the risk of measles and other childhood infections post-Ebola. Science. 2015 Mar 13; 347(6227):1240-2. Takahashi S, Metcalf CJ, Ferrari MJ, Moss WJ, Truelove SA, Tatem AJ, Grenfell BT, Lessler J. PMID: 25766232.
      View in: PubMed   Mentions: 73     Fields:    Translation:HumansPHPublic Health
    26. Transport networks and inequities in vaccination: remoteness shapes measles vaccine coverage and prospects for elimination across Africa. Epidemiol Infect. 2015 May; 143(7):1457-66. Metcalf CJ, Tatem A, Bjornstad ON, Lessler J, O'Reilly K, Takahashi S, Cutts F, Grenfell BT. PMID: 25119237.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansPHPublic Health
    27. Estimating incidence curves of several infections using symptom surveillance data. PLoS One. 2011; 6(8):e23380. Goldstein E, Cowling BJ, Aiello AE, Takahashi S, King G, Lu Y, Lipsitch M. PMID: 21887246.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansPHPublic Health
    28. Predicting the epidemic sizes of influenza A/H1N1, A/H3N2, and B: a statistical method. PLoS Med. 2011 Jul; 8(7):e1001051. Goldstein E, Cobey S, Takahashi S, Miller JC, Lipsitch M. PMID: 21750666.
      View in: PubMed   Mentions: 72     Fields:    Translation:HumansCellsPHPublic Health
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