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Shailesh Date, PhD

Title(s)Associate Professor, Epidemiology & Biostatistics
SchoolSchool of Medicine
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    Collapse Education and Training
    Stanford University (Graduate School of Business), Stanford, CAIgnite Cert. Program2013Innovation & Entrepreneurship
    Univ. of Pennsylvania School of Medicine, Philadelphia, PAPostdoc2008Infectious Diseases (Comp. Bio. of Apicomplexan Parasites)
    Univ. Of Texas at Austin, Austin, TexasPh.D.2003Molecular Biology (Computational Biology)
    Univ. of Pune, Pune, IndiaM.Sc.1997Botany (Plant Biotech. as specialization)
    Fergusson College, Pune, IndiaB.Sc. (Hons)1995Botany

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Tyml T, Date SV, Woyke T. A single-cell genome perspective on studying intracellular associations in unicellular eukaryotes. Philos Trans R Soc Lond B Biol Sci. 2019 Nov 25; 374(1786):20190082. PMID: 31587647.
      View in: PubMed
    2. Morisaki JH, Smith PA, Date SV, Kajihara KK, Truong CL, Modrusan Z, Yan D, Kang J, Xu M, Shah IM, Mintzer R, Kofoed EM, Cheung TK, Arnott D, Koehler MF, Heise CE, Brown EJ, Tan MW, Hazenbos WL. A Putative Bacterial ABC Transporter Circumvents the Essentiality of Signal Peptidase. mBio. 2016 09 06; 7(5). PMID: 27601569.
      View in: PubMed
    3. Kofoed EM, Yan D, Katakam AK, Reichelt M, Lin B, Kim J, Park S, Date SV, Monk IR, Xu M, Austin CD, Maurer T, Tan MW. De Novo Guanine Biosynthesis but Not the Riboswitch-Regulated Purine Salvage Pathway Is Required for Staphylococcus aureus Infection In Vivo. J Bacteriol. 2016 07 15; 198(14):2001-2015. PMID: 27161118.
      View in: PubMed
    4. Date SV, Modrusan Z, Lawrence M, Morisaki JH, Toy K, Shah IM, Kim J, Park S, Xu M, Basuino L, Chan L, Zeitschel D, Chambers HF, Tan MW, Brown EJ, Diep BA, Hazenbos WL. Global gene expression of methicillin-resistant Staphylococcus aureus USA300 during human and mouse infection. J Infect Dis. 2014 May 15; 209(10):1542-50. PMID: 24286981.
      View in: PubMed
    5. Diep BA, Phung Q, Date S, Arnott D, Bakalarski C, Xu M, Nakamura G, Swem DL, Alexander MK, Le HN, Mai TT, Tan MW, Brown EJ, Nishiyama M. Identifying potential therapeutic targets of methicillin-resistant Staphylococcus aureus through in vivo proteomic analysis. J Infect Dis. 2014 May 15; 209(10):1533-41. PMID: 24280367.
      View in: PubMed
    6. Pantua H, Diao J, Ultsch M, Hazen M, Mathieu M, McCutcheon K, Takeda K, Date S, Cheung TK, Phung Q, Hass P, Arnott D, Hongo JA, Matthews DJ, Brown A, Patel AH, Kelley RF, Eigenbrot C, Kapadia SB. Glycan shifting on hepatitis C virus (HCV) E2 glycoprotein is a mechanism for escape from broadly neutralizing antibodies. J Mol Biol. 2013 Jun 12; 425(11):1899-1914. PMID: 23458406.
      View in: PubMed
    7. Schleiss MR, McGregor A, Choi KY, Date SV, Cui X, McVoy MA. Analysis of the nucleotide sequence of the guinea pig cytomegalovirus (GPCMV) genome. Virol J. 2008 Nov 12; 5:139. PMID: 19014498.
      View in: PubMed
    8. Date SV. The Rosetta stone method. Methods Mol Biol. 2008; 453:169-80. PMID: 18712302.
      View in: PubMed
    9. Date SV, Peregrín-Alvarez JM. Phylogenetic profiling. Methods Mol Biol. 2008; 453:201-16. PMID: 18712304.
      View in: PubMed
    10. Date SV. Estimating protein function using protein-protein relationships. Methods Mol Biol. 2007; 408:109-27. PMID: 18314580.
      View in: PubMed
    11. Date SV, Stoeckert CJ. Computational modeling of the Plasmodium falciparum interactome reveals protein function on a genome-wide scale. Genome Res. 2006 Apr; 16(4):542-9. PMID: 16520460.
      View in: PubMed
    12. Date SV, Marcotte EM. Protein function prediction using the Protein Link EXplorer (PLEX). Bioinformatics. 2005 May 15; 21(10):2558-9. PMID: 15701682.
      View in: PubMed
    13. Lee I, Date SV, Adai AT, Marcotte EM. A probabilistic functional network of yeast genes. Science. 2004 Nov 26; 306(5701):1555-8. PMID: 15567862.
      View in: PubMed
    14. Baliga NS, Bonneau R, Facciotti MT, Pan M, Glusman G, Deutsch EW, Shannon P, Chiu Y, Weng RS, Gan RR, Hung P, Date SV, Marcotte E, Hood L, Ng WV. Genome sequence of Haloarcula marismortui: a halophilic archaeon from the Dead Sea. Genome Res. 2004 Nov; 14(11):2221-34. PMID: 15520287.
      View in: PubMed
    15. Adai AT, Date SV, Wieland S, Marcotte EM. LGL: creating a map of protein function with an algorithm for visualizing very large biological networks. J Mol Biol. 2004 Jun 25; 340(1):179-90. PMID: 15184029.
      View in: PubMed
    16. Date SV, Marcotte EM. Discovery of uncharacterized cellular systems by genome-wide analysis of functional linkages. Nat Biotechnol. 2003 Sep; 21(9):1055-62. PMID: 12923548.
      View in: PubMed
    17. Marcotte E, Date S. Exploiting big biology: integrating large-scale biological data for function inference. Brief Bioinform. 2001 Dec; 2(4):363-74. PMID: 11808748.
      View in: PubMed
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