Soo Jin Cho, MD, PhD

Title(s)Associate Professor, Pathology
SchoolSchool of Medicine
Address513 Parnassus Avenue, HSW, #M2356
San Francisco CA 94143
Phone415-885-7586
PronounsShe/Her/Hers
ORCID ORCID Icon0000-0001-6324-6858 Additional info
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    Collapse Biography 
    Collapse education and training
    Yale University, New Haven, CTB.S./M.S.2000Molecular Biophysics & Biochemistry
    Washington University School of Medicine, Saint Louis, MOM.D./Ph.D.2008Molecular Cell Biology
    University of California, San FranciscoResident2011Anatomic Pathology
    University of California, San FranciscoChief Resident2012Anatomic Pathology
    University of California, San Francisco (Surgical Pathology & Liver/Gastrointestinal Pathology)Fellow2012Anatomic Pathology
    Baylor College of Medicine / Texas Children's Hospital, Houston, TXFellow2014Pediatric Pathology

    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Wilms Tumor: An Unexpected Diagnosis in Adult Patients. Arch Pathol Lab Med. 2024 Jun 01; 148(6):722-727. Chan GJ, Stohr BA, Osunkoya AO, Croom NA, Cho SJ, Balassanian R, Charu V, Bean GR, Chan E. PMID: 37756569.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    2. Single-cell and spatial multi-omics highlight effects of anti-integrin therapy across cellular compartments in ulcerative colitis. Nat Commun. 2024 Feb 19; 15(1):1493. Mennillo E, Kim YJ, Lee G, Rusu I, Patel RK, Dorman LC, Flynn E, Li S, Bain JL, Andersen C, Rao A, Tamaki S, Tsui J, Shen A, Lotstein ML, Rahim M, Naser M, Bernard-Vazquez F, Eckalbar W, Cho SJ, Beck K, El-Nachef N, Lewin S, Selvig DR, Terdiman JP, Mahadevan U, Oh DY, Fragiadakis GK, Pisco A, Combes AJ, Kattah MG. PMID: 38374043; PMCID: PMC10876948.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    3. Osteosarcoma PDX-Derived Cell Line Models for Preclinical Drug Evaluation Demonstrate Metastasis Inhibition by Dinaciclib through a Genome-Targeted Approach. Clin Cancer Res. 2024 02 16; 30(4):849-864. Schott CR, Koehne AL, Sayles LC, Young EP, Luck C, Yu K, Lee AG, Breese MR, Leung SG, Xu H, Shah AT, Liu HY, Spillinger A, Behroozfard IH, Marini KD, Dinh PT, Pons Ventura MV, Vanderboon EN, Hazard FK, Cho SJ, Avedian RS, Mohler DG, Zimel M, Wustrack R, Curtis C, Sirota M, Sweet-Cordero EA. PMID: 37703185; PMCID: PMC10870121.
      View in: PubMed   Mentions: 7     Fields:    
    4. Focal nodular hyperplasia-like nodules arising in the setting of hepatic vascular disorders with portosystemic shunting show β-catenin activation. Hum Pathol. 2023 12; 142:20-26. Umetsu SE, Joseph NM, Cho SJ, Morotti R, Deshpande V, Jain D, Kakar S. PMID: 37806391.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    5. Consensus classification of pediatric hepatocellular tumors: A report from the Children's Hepatic tumors International Collaboration (CHIC). Pediatr Blood Cancer. 2023 Jun 29; e30505. Cho SJ, Ranganathan S, Alaggio R, Maibach R, Tanaka Y, Inoue T, Leuschner I, de Krijger R, Vokuhl C, Krailo M, Malogolowkin M, Meyers R, Czauderna P, Hiyama E, Ansari M, Morland B, Trobaugh-Lotrario A, O'Neill AF, Rangaswami A, Häberle B, López-Terrada D. PMID: 37384428.
      View in: PubMed   Mentions: 1     Fields:    
    6. Development and characterization of new patient-derived xenograft (PDX) models of osteosarcoma with distinct metastatic capacities. bioRxiv. 2023 Jan 20. Schott CR, Koehne AL, Sayles LC, Young EP, Luck C, Yu K, Lee AG, Breese MR, Leung SG, Xu H, Shah AT, Liu HY, Spillinger A, Behroozfard IH, Marini KD, Dinh PT, Pons Ventura MAV, Vanderboon EN, Hazard FK, Cho SJ, Avedian RS, Mohler DG, Zimel M, Wustrack R, Curtis C, Sirota M, Sweet-Cordero EA. PMID: 36711882; PMCID: PMC9882347.
      View in: PubMed   Mentions:
    7. Outcomes of Patients Treated for Hepatoblastoma with Low Alpha-Fetoprotein and/or Small Cell Undifferentiated Histology: A Report from the Children's Hepatic Tumors International Collaboration (CHIC). Cancers (Basel). 2023 Jan 11; 15(2). Trobaugh-Lotrario AD, Maibach R, Aronson DC, Rangaswami A, Häberle B, O'Neill AF, Schmid I, Ansari M, Hishiki T, Ranganathan S, Alaggio R, de Krijger RR, Tanaka Y, Cho SJ, Vokuhl C, Maxwell R, Krailo M, Hiyama E, Czauderna P, Finegold M, Feusner JH, Malogolowkin MH, Meyers RL, Lopez-Terrada D. PMID: 36672416; PMCID: PMC9857147.
      View in: PubMed   Mentions: 5  
    8. Integrated Genomic and Clinicopathologic Approach Distinguishes Pancreatic Grade 3 Neuroendocrine Tumor From Neuroendocrine Carcinoma and Identifies a Subset With Molecular Overlap. Mod Pathol. 2023 03; 36(3):100065. Umetsu SE, Kakar S, Basturk O, Kim GE, Chatterjee D, Wen KW, Hale G, Shafizadeh N, Cho SJ, Whitman J, Gill RM, Jones KD, Navale P, Bergsland E, Klimstra D, Joseph NM. PMID: 36788102.
      View in: PubMed   Mentions: 9     Fields:    Translation:Humans
    9. Intact Chorionic Vesicle in Very Early Products of Conception Specimens: Clinicopathologic Features of 26 Cases That May Mimic Complete Hydatidiform Mole. Am J Surg Pathol. 2023 03 01; 47(3):397-408. Kayraklioglu N, Gasper C, Cho SJ, Lage J, Rabban JT. PMID: 36729386.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    10. Single-cell analysis of hepatoblastoma identifies tumor signatures that predict chemotherapy susceptibility using patient-specific tumor spheroids. Nat Commun. 2022 08 25; 13(1):4878. Song H, Bucher S, Rosenberg K, Tsui M, Burhan D, Hoffman D, Cho SJ, Rangaswami A, Breese M, Leung S, Ventura MVP, Sweet-Cordero EA, Huang FW, Nijagal A, Wang B. PMID: 36008377; PMCID: PMC9411569.
      View in: PubMed   Mentions: 12     Fields:    Translation:Humans
    11. Intracranial mesenchymal tumors with FET-CREB fusion are composed of at least two epigenetic subgroups distinct from meningioma and extracranial sarcomas. Brain Pathol. 2022 07; 32(4):e13037. Sloan EA, Gupta R, Koelsche C, Chiang J, Villanueva-Meyer JE, Alexandrescu S, Eschbacher JM, Wang W, Mafra M, Ud Din N, Carr-Boyd E, Watson M, Punsoni M, Oviedo A, Gilani A, Kleinschmidt-DeMasters BK, Coss DJ, Lopes MB, Reddy A, Mueller S, Cho SJ, Horvai AE, Lee JC, Pekmezci M, Tihan T, Bollen AW, Rodriguez FJ, Ellison DW, Perry A, von Deimling A, Chang SM, Berger MS, Solomon DA. PMID: 34821426; PMCID: PMC9245938.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    12. A Comprehensive Circulating Tumor DNA Assay for Detection of Translocation and Copy-Number Changes in Pediatric Sarcomas. Mol Cancer Ther. 2021 10; 20(10):2016-2025. Shah AT, Azad TD, Breese MR, Chabon JJ, Hamilton EG, Straessler K, Kurtz DM, Leung SG, Spillinger A, Liu HY, Behroozfard IH, Wittber FM, Hazard FK, Cho SJ, Daldrup-Link HE, Vo KT, Rangaswami A, Pribnow A, Spunt SL, Lacayo NJ, Diehn M, Alizadeh AA, Sweet-Cordero EA. PMID: 34353895; PMCID: PMC9307079.
      View in: PubMed   Mentions: 16     Fields:    Translation:Humans
    13. Visceral Adipose Tissue Inflammation and Radiographic Visceral-to-Subcutaneous Adipose Tissue Ratio in Patients with Cirrhosis. Dig Dis Sci. 2022 07; 67(7):3436-3444. Ha NB, Cho SJ, Mohamad Y, Kent D, Jun G, Wong R, Swarnakar V, Lin S, Maher JJ, Lai JC. PMID: 34136974; PMCID: PMC8815298.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    14. Tumor morphology and location associate with immune cell composition in pleomorphic sarcoma. Cancer Immunol Immunother. 2021 Oct; 70(10):3031-3040. Wustrack RL, Shao E, Sheridan J, Zimel M, Cho SJ, Horvai AE, Luong D, Kwek SS, Fong L, Okimoto RA. PMID: 33864502; PMCID: PMC8423706.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    15. Novel BRAF gene fusions and activating point mutations in spindle cell sarcomas with histologic overlap with infantile fibrosarcoma. Mod Pathol. 2021 Aug; 34(8):1530-1540. Penning AJ, Al-Ibraheemi A, Michal M, Larsen BT, Cho SJ, Lockwood CM, Paulson VA, Liu YJ, Plank L, Fritchie K, Beadling C, Neff TL, Corless CL, Rudzinski ER, Davis JL. PMID: 33850302.
      View in: PubMed   Mentions: 10     Fields:    Translation:Humans
    16. Intracranial mesenchymal tumor with FET-CREB fusion-A unifying diagnosis for the spectrum of intracranial myxoid mesenchymal tumors and angiomatoid fibrous histiocytoma-like neoplasms. Brain Pathol. 2021 07; 31(4):e12918. Sloan EA, Chiang J, Villanueva-Meyer JE, Alexandrescu S, Eschbacher JM, Wang W, Mafra M, Ud Din N, Carr-Boyd E, Watson M, Punsoni M, Oviedo A, Gilani A, Kleinschmidt-DeMasters BK, Coss DJ, Lopes MB, Raffel C, Berger MS, Chang SM, Reddy A, Ramani B, Ferris SP, Lee JC, Hofmann JW, Cho SJ, Horvai AE, Pekmezci M, Tihan T, Bollen AW, Rodriguez FJ, Ellison DW, Perry A, Solomon DA. PMID: 33141488; PMCID: PMC8089120.
      View in: PubMed   Mentions: 30     Fields:    Translation:Humans
    17. Dialogs in the assessment of neonatal cholestatic liver disease. Hum Pathol. 2021 06; 112:102-115. Cho SJ, Perito ER, Shafizadeh N, Kim GE. PMID: 33359238.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    18. Pediatric Liver Tumors: Updates in Classification. Surg Pathol Clin. 2020 Dec; 13(4):601-623. Cho SJ. PMID: 33183723.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    19. Approaches to Research Determination of Late Acute Cellular Rejection in Pediatric Liver Transplant Recipients. Liver Transpl. 2021 Jan; 27(1):106-115. Mazariegos GV, Shneider BL, Shemesh E, Schady D, Melin-Aldana H, Cho SJ, Anand R, Erinjeri J, Annunziato R, Reyes-Mugica M. PMID: 32978871; PMCID: PMC7785571.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    20. Hybrid Low-Grade Fibromyxoid Sarcoma and Sclerosing Epithelioid Fibrosarcoma of the Pancreas. J Gastrointest Cancer. 2020 Sep; 51(3):1025-1029. Kramer SP, Bowman CJ, Wang ZJ, Sheahon KM, Nakakura EK, Cho SJ, Umetsu SE, Behr SC. PMID: 32034641.
      View in: PubMed   Mentions: 8     Fields:    Translation:Humans
    21. Molecular characterisation of metanephric adenomas beyond BRAF: genetic evidence for potential malignant evolution. Histopathology. 2020 Jun; 76(7):1084-1090. Chan E, Stohr BA, Croom NA, Cho SJ, Garg K, Troxell ML, Higgins JP, Bean GR. PMID: 32064677.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    22. Clinicopathologic and molecular features of intracranial desmoplastic small round cell tumors. Brain Pathol. 2020 03; 30(2):213-225. Lee JC, Villanueva-Meyer JE, Ferris SP, Cham EM, Zucker J, Cooney T, Gilani A, Kleinschmidt-DeMasters BK, Trembath D, Mafra M, Chiang J, Ellison DW, Cho SJ, Horvai AE, Van Ziffle J, Onodera C, Devine P, Grenert JP, de Voijs CMA, van Blokland WTM, de Leng WWJ, Ploegmakers MJ, Flucke U, Pekmezci M, Bollen AW, Tihan T, Koelsche C, von Deimling A, Wesseling P, Solomon DA, Perry A. PMID: 31837177; PMCID: PMC7780368.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    23. EWSR1-NFATC2 Translocation-associated Sarcoma Clinicopathologic Findings in a Rare Aggressive Primary Bone or Soft Tissue Tumor. Am J Surg Pathol. 2019 08; 43(8):1112-1122. Wang GY, Thomas DG, Davis JL, Ng T, Patel RM, Harms PW, Betz BL, Schuetze SM, McHugh JB, Horvai AE, Cho SJ, Lucas DR. PMID: 30994538.
      View in: PubMed   Mentions: 29     Fields:    Translation:Humans
    24. A practical approach to the pathology of neonatal cholestatic liver disease. Semin Diagn Pathol. 2019 Nov; 36(6):375-388. Cho SJ, Kim GE. PMID: 31455583.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    25. Intra-articular Osteoid Osteoma of the Distal Femur Treated with Osteochondral Grafting: A Report of 2 Cases. JBJS Case Connect. 2019 Apr-Jun; 9(2):e0211. Monroe EJ, Chambers CC, Davoodian A, Cho SJ, Motamedi D, Allen CR. PMID: 31211746.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    26. Primary intracranial sarcomas with DICER1 mutation often contain prominent eosinophilic cytoplasmic globules and can occur in the setting of neurofibromatosis type 1. Acta Neuropathol. 2019 03; 137(3):521-525. Lee JC, Villanueva-Meyer JE, Ferris SP, Sloan EA, Hofmann JW, Hattab EM, Williams BJ, Guo H, Torkildson J, Florez A, Van Ziffle J, Onodera C, Grenert JP, Cho SJ, Horvai AE, Jones DTW, Pfister SM, Koelsche C, von Deimling A, Korshunov A, Perry A, Solomon DA. PMID: 30649606; PMCID: PMC6408274.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansCells
    27. Genome-Informed Targeted Therapy for Osteosarcoma. Cancer Discov. 2019 01; 9(1):46-63. Sayles LC, Breese MR, Koehne AL, Leung SG, Lee AG, Liu HY, Spillinger A, Shah AT, Tanasa B, Straessler K, Hazard FK, Spunt SL, Marina N, Kim GE, Cho SJ, Avedian RS, Mohler DG, Kim MO, DuBois SG, Hawkins DS, Sweet-Cordero EA. PMID: 30266815; PMCID: PMC7134333.
      View in: PubMed   Mentions: 201     Fields:    Translation:HumansAnimals
    28. Identification of high-risk human papillomavirus and Rb/E2F pathway genomic alterations in mutually exclusive subsets of colorectal neuroendocrine carcinoma. Mod Pathol. 2019 02; 32(2):290-305. Shamir ER, Devine WP, Pekmezci M, Umetsu SE, Krings G, Federman S, Cho SJ, Saunders TA, Jen KY, Bergsland E, Jones K, Kim GE, Kakar S, Chiu CY, Joseph NM. PMID: 30237525.
      View in: PubMed   Mentions: 26     Fields:    Translation:Humans
    29. Tumor Budding in Colorectal Carcinoma: Translating a Morphologic Score Into Clinically Meaningful Results. Arch Pathol Lab Med. 2018 08; 142(8):952-957. Cho SJ, Kakar S. PMID: 30040461.
      View in: PubMed   Mentions: 26     Fields:    Translation:Humans
    30. EWSR1-NFATC2 gene fusion in a soft tissue tumor with epithelioid round cell morphology and abundant stroma: a case report and review of the literature. Hum Pathol. 2018 11; 81:281-290. Cohen JN, Sabnis AJ, Krings G, Cho SJ, Horvai AE, Davis JL. PMID: 29626598; PMCID: PMC8104452.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCells
    31. Specific Macronutrients Exert Unique Influences on the Adipose-Liver Axis to Promote Hepatic Steatosis in Mice. Cell Mol Gastroenterol Hepatol. 2017 Sep; 4(2):223-236. Duwaerts CC, Amin AM, Siao K, Her C, Fitch M, Beysen C, Turner SM, Goodsell A, Baron JL, Grenert JP, Cho SJ, Maher JJ. PMID: 28649594; PMCID: PMC5472193.
      View in: PubMed   Mentions: 10     Fields:    
    32. Giant Cell Tumor of Bone: Documented Progression over 4 Years from Its Origin at the Metaphysis to the Articular Surface. Case Rep Radiol. 2016; 2016:9786925. Burke C, Link T, O'Donnell RJ, Cho SJ, Motamedi D. PMID: 27630783; PMCID: PMC5005548.
      View in: PubMed   Mentions: 5  
    33. Expression of liver fatty acid binding protein in hepatocellular carcinoma. Hum Pathol. 2016 Apr; 50:135-9. Cho SJ, Ferrell LD, Gill RM. PMID: 26997447; PMCID: PMC5224915.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    34. Chondro-Osseous Lesions of Soft Tissue. Surg Pathol Clin. 2015 Sep; 8(3):419-44. Cho SJ, Horvai A. PMID: 26297064.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    35. Hepatic portocholecystostomy for biliary atresia: a 25-year follow-up and review. J Pediatr Surg. 2013 Jan; 48(1):262-6. Schecter SC, Courtier J, Cho SJ, Saadai P, Hirose S, Mackenzie TC, Miniati D. PMID: 23331828.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    36. Solitary rectal ulcer syndrome in children and adolescents. J Pediatr Gastroenterol Nutr. 2012 Feb; 54(2):266-70. Perito ER, Mileti E, Dalal DH, Cho SJ, Ferrell LD, McCracken M, Heyman MB. PMID: 22094902; PMCID: PMC3719860.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    37. Giant mesenteric cystic lymphangioma presenting with abdominal pain and masquerading as a gynecologic malignancy. Rare Tumors. 2009 Dec 28; 1(2):e48. Maa J, Wa C, Jaigirdir A, Cho SJ, Corvera CU. PMID: 21139927; PMCID: PMC2994469.
      View in: PubMed   Mentions: 5  
    38. Deletion of the AU-rich RNA binding protein Apobec-1 reduces intestinal tumor burden in Apc(min) mice. Cancer Res. 2007 Sep 15; 67(18):8565-73. Blanc V, Henderson JO, Newberry RD, Xie Y, Cho SJ, Newberry EP, Kennedy S, Rubin DC, Wang HL, Luo J, Davidson NO. PMID: 17875695.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansAnimals
    39. Mouse models as tools to explore cytidine-to-uridine RNA editing. Methods Enzymol. 2007; 424:417-35. Cho SJ, Blanc V, Davidson NO. PMID: 17662852.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    40. APOBEC3F and APOBEC3G mRNA levels do not correlate with human immunodeficiency virus type 1 plasma viremia or CD4+ T-cell count. J Virol. 2006 Feb; 80(4):2069-72. Cho SJ, Drechsler H, Burke RC, Arens MQ, Powderly W, Davidson NO. PMID: 16439564; PMCID: PMC1367163.
      View in: PubMed   Mentions: 41     Fields:    Translation:HumansCells
    41. Cytidine deamination of retroviral DNA by diverse APOBEC proteins. Curr Biol. 2004 Aug 10; 14(15):1392-6. Bishop KN, Holmes RK, Sheehy AM, Davidson NO, Cho SJ, Malim MH. PMID: 15296758.
      View in: PubMed   Mentions: 377     Fields:    Translation:HumansCells
    42. Branchpoint selection in the splicing of U12-dependent introns in vitro. RNA. 2002 May; 8(5):579-86. McConnell TS, Cho SJ, Frilander MJ, Steitz JA. PMID: 12022225; PMCID: PMC1370279.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansAnimalsCells
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