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Srivats Venkataramanan, PhD

Title(s)Postdoctoral Scholar, Cell and Tissue Biology
SchoolSchool of Dentistry
Address513 Parnassus Ave, HSW
San Francisco CA 94143
Phone415-476-3275
EmailSrivats.Venkataramanan@ucsf.edu
ORCID ORCID Icon0000-0002-2507-401X Additional info
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    Collapse Biography 
    Collapse Education and Training
    University of California, Los Angeles, California, USAPhD12/2017Molecular, Cell and Developmental Biology
    Indian Institute of Technology, Madras, IndiaM.Tech07/2011Biotechnology
    Indian Institute of Technology, Madras, IndiaB.Tech07/2011Biotechnology
    Collapse Awards and Honors
    RNA Society2018Travel Award
    University of California, Los Angeles2016  - 2017Dissertation Year Fellowship
    American Society for Biochemistry and Molecular Biology2016Experimental Biology Thematic Poster Award
    University of California, Los Angeles2015  - 2016Whitcome Pre-Doctoral Fellowship in Molecular Biology
    GE Foundation2009  - 2010Scholar-Leader Program Award

    Collapse Overview 

    Collapse Research 
    Collapse Research Activities and Funding
    Heterogenous cytoplasmic RNA-protein aggregates enhance cellular survival under stress
    NIH F32GM133144Jan 2, 2020 - Jan 1, 2022
    Role: Principal Investigator

    Collapse ORNG Applications 
    Collapse Websites

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. DDX3 depletion represses translation of mRNAs with complex 5' UTRs. Nucleic Acids Res. 2021 Apr 27. PMID: 33905506.
      View in: PubMed   Mentions:    Fields:    
    2. Control of ribosomal protein synthesis by the Microprocessor complex. Sci Signal. 2021 Feb 23; 14(671). PMID: 33622983.
      View in: PubMed   Mentions:    Fields:    
    3. A SARS-CoV-2 protein interaction map reveals targets for drug repurposing. Nature. 2020 07; 583(7816):459-468. Gordon DE, Jang GM, Bouhaddou M, Xu J, Obernier K, White KM, O'Meara MJ, Rezelj VV, Guo JZ, Swaney DL, Tummino TA, Hüttenhain R, Kaake RM, Richards AL, Tutuncuoglu B, Foussard H, Batra J, Haas K, Modak M, Kim M, Haas P, Polacco BJ, Braberg H, Fabius JM, Eckhardt M, Soucheray M, Bennett MJ, Cakir M, McGregor MJ, Li Q, Meyer B, Roesch F, Vallet T, Mac Kain A, Miorin L, Moreno E, Naing ZZC, Zhou Y, Peng S, Shi Y, Zhang Z, Shen W, Kirby IT, Melnyk JE, Chorba JS, Lou K, Dai SA, Barrio-Hernandez I, Memon D, Hernandez-Armenta C, Lyu J, Mathy CJP, Perica T, Pilla KB, Ganesan SJ, Saltzberg DJ, Rakesh R, Liu X, Rosenthal SB, Calviello L, Venkataramanan S, Liboy-Lugo J, Lin Y, Huang XP, Liu Y, Wankowicz SA, Bohn M, Safari M, Ugur FS, Koh C, Savar NS, Tran QD, Shengjuler D, Fletcher SJ, O'Neal MC, Cai Y, Chang JCJ, Broadhurst DJ, Klippsten S, Sharp PP, Wenzell NA, Kuzuoglu-Ozturk D, Wang HY, Trenker R, Young JM, Cavero DA, Hiatt J, Roth TL, Rathore U, Subramanian A, Noack J, Hubert M, Stroud RM, Frankel AD, Rosenberg OS, Verba KA, Agard DA, Ott M, Emerman M, Jura N, von Zastrow M, Verdin E, Ashworth A, Schwartz O, d'Enfert C, Mukherjee S, Jacobson M, Malik HS, Fujimori DG, Ideker T, Craik CS, Floor SN, Fraser JS, Gross JD, Sali A, Roth BL, Ruggero D, Taunton J, Kortemme T, Beltrao P, Vignuzzi M, García-Sastre A, Shokat KM, Shoichet BK, Krogan NJ. PMID: 32353859.
      View in: PubMed   Mentions: 328     Fields:    Translation:HumansAnimalsCellsPHPublic Health
    4. Pathogenic DDX3X Mutations Impair RNA Metabolism and Neurogenesis during Fetal Cortical Development. Neuron. 2020 05 06; 106(3):404-420.e8. Lennox AL, Hoye ML, Jiang R, Johnson-Kerner BL, Suit LA, Venkataramanan S, Sheehan CJ, Alsina FC, Fregeau B, Aldinger KA, Moey C, Lobach I, Afenjar A, Babovic-Vuksanovic D, Bézieau S, Blackburn PR, Bunt J, Burglen L, Campeau PM, Charles P, Chung BHY, Cogné B, Curry C, D'Agostino MD, Di Donato N, Faivre L, Héron D, Innes AM, Isidor B, Keren B, Kimball A, Klee EW, Kuentz P, Küry S, Martin-Coignard D, Mirzaa G, Mignot C, Miyake N, Matsumoto N, Fujita A, Nava C, Nizon M, Rodriguez D, Blok LS, Thauvin-Robinet C, Thevenon J, Vincent M, Ziegler A, Dobyns W, Richards LJ, Barkovich AJ, Floor SN, Silver DL, Sherr EH. PMID: 32135084.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    5. DDX3 depletion selectively represses translation of structured mRNAs. bioRxiv. 2019. Calviello, L., Venkataramanan, S., Rogowski, K., Wyler, E., Tejura, M., Thai, B., Krol, J., Filipowicz, W., Landthaler, M., and Floor, SN. View Publication.
    6. The nuclear RNAi factor, NRDE2, prevents the accumulation of DNA damage during mitosis in stressful growth conditions. bioRxiv. 2018. Aarati Asundi, Srivats Venkataramanan, Atsushi Suzuki, Stephen N Floor, Andrei Goga, Noelle L'Etoile. View Publication.
    7. The Traffic Jam: Polyamine Prevalence Pauses Protein Production. Mol Cell. 2018 04 19; 70(2):191-192. Venkataramanan S, Floor SN. PMID: 29677487.
      View in: PubMed   Mentions: 1     Fields:    Translation:Cells
    8. The chromatin remodeling complex Swi/Snf regulates splicing of meiotic transcripts in Saccharomyces cerevisiae. Nucleic Acids Res. 2017 Jul 27; 45(13):7708-7721. Venkataramanan S, Douglass S, Galivanche AR, Johnson TL. PMID: 28637241.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    9. Chromatin-remodeling SWI/SNF complex regulates coenzyme Q6 synthesis and a metabolic shift to respiration in yeast. J Biol Chem. 2017 09 08; 292(36):14851-14866. Awad AM, Venkataramanan S, Nag A, Galivanche AR, Bradley MC, Neves LT, Douglass S, Clarke CF, Johnson TL. PMID: 28739803.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    10. The histone variant H2A.Z promotes efficient cotranscriptional splicing in S. cerevisiae. Genes Dev. 2017 04 01; 31(7):702-717. Neves LT, Douglass S, Spreafico R, Venkataramanan S, Kress TL, Johnson TL. PMID: 28446598.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCells
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