Thomas James, PhD

Title(s)Professor Emeritus, Pharmaceutical Chemistry
SchoolSchool of Pharmacy
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    Other Positions
    Title(s)Interim Director, Molecular Design Institute


    Collapse Biography 
    Collapse Awards and Honors
    University of New Mexico, Albuquerque1962  - 1965University Roll of Distinction
    University of New Mexico, Albuquerque1962  - 1965University Honor Roll
    University of New Mexico, Albuquerque1964Kappa Mu Epsilon (Mathematics Honorary)
    Bundesrepublik Deutschlan1964German Award
    University of New Mexico, Albuquerque1964Phi Kappa Phi (Scholastic Honorary)
    University of New Mexico, Albuquerque1965Phi Beta Kappa (Scholastic Honorary)

    Collapse Overview 

    Collapse Research 
    Collapse Research Activities and Funding
    Development and Application of In-Cell NMR Techniques
    NIH R21GM066039Aug 1, 2002 - Jul 31, 2005
    Role: Principal Investigator
    ACQUISITION OF AN 800 MHZ NMR SPECTROMETER
    NIH S10RR015748Mar 15, 2001 - Sep 14, 2003
    Role: Principal Investigator
    RNA STRUCTURE IN AGILE LOCI OF RIBOSOME AND RETROVIRUSES
    NIH R03TW001465Feb 9, 2001 - Jan 31, 2005
    Role: Principal Investigator
    THERMODYNAMICS OF PROTEIN-DNA &LIGAND-DNA COMPLEXES
    NIH R03TW001234Feb 1, 2000 - Jan 31, 2004
    Role: Principal Investigator
    Three-Dimensional HIV RNA Genome Targeted Drug Leads
    NIH R01AI046967Jan 1, 2000 - Aug 31, 2012
    Role: Principal Investigator
    TARGETING 4.5S RNA ANTIMICROBIAL DRUG DISCOVERY
    NIH R41AI044515Sep 30, 1999 - Sep 29, 2000
    Role: Principal Investigator
    PURCHASE OF Q TOF MASS SPECTROMETER
    NIH S10RR012961May 15, 1998 - May 14, 1999
    Role: Principal Investigator
    ACQUISITION OF A 500 MHZ NMR SPECTROMETER CONSOLE
    NIH S10RR010490Jun 1, 1996 - May 31, 1997
    Role: Principal Investigator
    SLIPPED LOOP STRUCTURE--A NOVEL POLYNUCLEOTIDE FOLDING
    NIH R03TW000438Jul 1, 1994 - Jun 30, 1998
    Role: Principal Investigator
    ACQUISITION OF A 600 MHZ NMR SPECTROMETER
    NIH S10RR007168May 19, 1992 - Sep 30, 1993
    Role: Principal Investigator
    PROTEIN STRUCTURE VIA ANALYSIS OF 2D NMR SPECTRA
    NIH R01GM041639Jan 1, 1991 - Dec 31, 1994
    Role: Principal Investigator
    High Performance Computing for Biomedical Research
    NIH P41RR006009Sep 1, 1990 - Jul 31, 2013
    Role: Co-Investigator
    OMEGA 500 UPGRADE WITH ARRAY PROCESSOR
    NIH S10RR005608Mar 5, 1990 - Mar 4, 1991
    Role: Principal Investigator
    SELF-SHIELDED GRADIENT COILS FOR IN VIVO NMR INSTRUMENT
    NIH S10RR004821Jun 14, 1989 - Jun 13, 1990
    Role: Principal Investigator
    SOLUTION STRUCTURE AND DYNAMICS OF NUCLEIC ACIDS
    NIH R01GM039247Feb 1, 1988 - Jun 30, 2002
    Role: Principal Investigator
    CONSOLE FOR IN VIVO MAGNETIC RESONANCE INSTRUMENT
    NIH S10RR003841Feb 1, 1988 - Jan 31, 1989
    Role: Principal Investigator
    HIGH-FIELD 500MHZ NMR SPECTROMETER
    NIH S10RR003479Jan 15, 1987 - Jan 14, 1988
    Role: Principal Investigator
    IN VIVO NMR SPECTROMETER/IMAGER
    NIH S10RR002433Dec 1, 1984 - Nov 30, 1985
    Role: Principal Investigator
    NATIONAL STABLE ISOTOPE RESOURCE AT LOS ALAMOS
    NIH P41RR002231Dec 1, 1983 - Jun 30, 2005
    Role: Co-Investigator
    Pharmaceutical Sciences and Pharmacogenomics
    NIH T32GM007175Jul 1, 1982 - Jun 30, 2022
    Role: Co-Principal Investigator
    Theoretical Studies of Drug/Nucleic Acid Interactions
    NIH R01CA025644Jan 1, 1980 - Jul 31, 2003
    Role: Principal Investigator
    Resource for Biocomputing, Visualization, and Informatics
    NIH/NCRR P41RR001081Jun 1, 1976 - Sep 14, 2012
    Role: Co-Investigator

    Collapse ORNG Applications 
    Collapse Academic Senate

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. A Fragment-Based Ligand Screen Against Part of a Large Protein Machine: The ND1 Domains of the AAA+ ATPase p97/VCP. J Biomol Screen. 2015 Jul; 20(6):788-800. Chimenti MS, Bulfer SL, Neitz RJ, Renslo AR, Jacobson MP, James TL, Arkin MR, Kelly MJ. PMID: 25690569.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    2. 13C NMR metabolomic evaluation of immediate and delayed mild hypothermia in cerebrocortical slices after oxygen-glucose deprivation. Anesthesiology. 2013 Nov; 119(5):1120-36. Liu J, Segal MR, Kelly MJ, Pelton JG, Kim M, James TL, Litt L. PMID: 23748856; PMCID: PMC3890426.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    3. 1H nuclear magnetic resonance brain metabolomics in neonatal mice after hypoxia-ischemia distinguished normothermic recovery from mild hypothermia recoveries. Pediatr Res. 2013 Aug; 74(2):170-9. Liu J, Sheldon RA, Segal MR, Kelly MJ, Pelton JG, Ferriero DM, James TL, Litt L. PMID: 23708689; PMCID: PMC3734529.
      View in: PubMed   Mentions: 21     Fields:    Translation:Animals
    4. Optimizing QSAR models for predicting ligand binding to the drug-metabolizing cytochrome P450 isoenzyme CYP2D6. Chem Biol Drug Des. 2011 Aug; 78(2):236-51. Saraceno M, Massarelli I, Imbriani M, James TL, Bianucci AM. PMID: 21575140.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    5. ACCF/AHA/AMA-PCPI 2011 performance measures for adults with coronary artery disease and hypertension: a report of the American College of Cardiology Foundation/American Heart Association Task Force on Performance Measures and the American Medical Association-Physician Consortium for Performance Improvement. Circulation. 2011 Jul 12; 124(2):248-70. Drozda J, Messer JV, Spertus J, Abramowitz B, Alexander K, Beam CT, Bonow RO, Burkiewicz JS, Crouch M, Goff DC, Hellman R, James T, King ML, Machado EA, Ortiz E, O'Toole M, Persell SD, Pines JM, Rybicki FJ, Sadwin LB, Sikkema JD, Smith PK, Torcson PJ, Wong JB. PMID: 21670226.
      View in: PubMed   Mentions: 48     Fields:    Translation:Humans
    6. Outcome-related metabolomic patterns from 1H/31P NMR after mild hypothermia treatments of oxygen-glucose deprivation in a neonatal brain slice model of asphyxia. J Cereb Blood Flow Metab. 2011 Feb; 31(2):547-59. Liu J, Litt L, Segal MR, Kelly MJ, Yoshihara HA, James TL. PMID: 20717124; PMCID: PMC3010526.
      View in: PubMed   Mentions: 17     Fields:    Translation:Animals
    7. Binding characteristics of small molecules that mimic nucleocapsid protein-induced maturation of stem-loop 1 of HIV-1 RNA. Biochemistry. 2010 Aug 03; 49(30):6341-51. Chung J, Ulyanov NB, Guilbert C, Mujeeb A, James TL. PMID: 20565056; PMCID: PMC2921804.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    8. RNA structural motifs that entail hydrogen bonds involving sugar-phosphate backbone atoms of RNA. New J Chem. 2010 May 01; 34(5):910-917. Ulyanov NB, James TL. PMID: 20689681; PMCID: PMC2915461.
      View in: PubMed   Mentions: 17  
    9. DOCK 6: combining techniques to model RNA-small molecule complexes. RNA. 2009 Jun; 15(6):1219-30. Lang PT, Brozell SR, Mukherjee S, Pettersen EF, Meng EC, Thomas V, Rizzo RC, Case DA, James TL, Kuntz ID. PMID: 19369428; PMCID: PMC2685511.
      View in: PubMed   Mentions: 258     Fields:    Translation:Cells
    10. Discovery of ligands for a novel target, the human telomerase RNA, based on flexible-target virtual screening and NMR. J Med Chem. 2008 Nov 27; 51(22):7205-15. Pinto IG, Guilbert C, Ulyanov NB, Stearns J, James TL. PMID: 18950148; PMCID: PMC2651004.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansCells
    11. Antioxidant effect of ethyl pyruvate in respiring neonatal cerebrocortical slices after H(2)O(2) stress. Neurochem Int. 2009 Feb; 54(2):106-10. Liu J, Segal M, Yoo S, Yang GY, Kelly M, James TL, Litt L. PMID: 19041675.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCells
    12. Perspectives on NMR in drug discovery: a technique comes of age. Nat Rev Drug Discov. 2008 Sep; 7(9):738-45. Pellecchia M, Bertini I, Cowburn D, Dalvit C, Giralt E, Jahnke W, James TL, Homans SW, Kessler H, Luchinat C, Meyer B, Oschkinat H, Peng J, Schwalbe H, Siegal G. PMID: 19172689; PMCID: PMC2891904.
      View in: PubMed   Mentions: 119     Fields:    
    13. Structure of a construct of a human poly(C)-binding protein containing the first and second KH domains reveals insights into its regulatory mechanisms. J Biol Chem. 2008 Oct 17; 283(42):28757-66. Du Z, Fenn S, Tjhen R, James TL. PMID: 18701464; PMCID: PMC2568903.
      View in: PubMed   Mentions: 37     Fields:    Translation:HumansCells
    14. A small molecule, Lys-Ala-7-amido-4-methylcoumarin, facilitates RNA dimer maturation of a stem-loop 1 transcript in vitro: structure-activity relationship of the activator. Biochemistry. 2008 Aug 05; 47(31):8148-56. Chung J, Mujeeb A, Jiang Y, Guilbert C, Pendke M, Wu Y, James TL. PMID: 18616287.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    15. Docking to RNA via root-mean-square-deviation-driven energy minimization with flexible ligands and flexible targets. J Chem Inf Model. 2008 Jun; 48(6):1257-68. Guilbert C, James TL. PMID: 18510306; PMCID: PMC2910576.
      View in: PubMed   Mentions: 34     Fields:    Translation:Cells
    16. Structural and biochemical insights into the dicing mechanism of mouse Dicer: a conserved lysine is critical for dsRNA cleavage. Proc Natl Acad Sci U S A. 2008 Feb 19; 105(7):2391-6. Du Z, Lee JK, Tjhen R, Stroud RM, James TL. PMID: 18268334; PMCID: PMC2268147.
      View in: PubMed   Mentions: 44     Fields:    Translation:AnimalsCells
    17. Exogenous ethyl pyruvate versus pyruvate during metabolic recovery after oxidative stress in neonatal rat cerebrocortical slices. Anesthesiology. 2007 Oct; 107(4):630-40. Zeng J, Liu J, Yang GY, Kelly MJ, James TL, Litt L. PMID: 17893460.
      View in: PubMed   Mentions: 19     Fields:    Translation:AnimalsCells
    18. Pseudoknot structures with conserved base triples in telomerase RNAs of ciliates. Nucleic Acids Res. 2007; 35(18):6150-60. Ulyanov NB, Shefer K, James TL, Tzfati Y. PMID: 17827211; PMCID: PMC2094054.
      View in: PubMed   Mentions: 20     Fields:    Translation:AnimalsCells
    19. X-ray crystallographic and NMR studies of protein-protein and protein-nucleic acid interactions involving the KH domains from human poly(C)-binding protein-2. RNA. 2007 Jul; 13(7):1043-51. Du Z, Lee JK, Fenn S, Tjhen R, Stroud RM, James TL. PMID: 17526645; PMCID: PMC1894928.
      View in: PubMed   Mentions: 36     Fields:    Translation:HumansCells
    20. Resonance assignment of the first and second KH (hnRNP-K homology) domains of human poly(C)-binding protein-2 (PCBP2). J Biomol NMR. 2007 Jun; 38(2):197. Du Z, Fenn S, James TL. PMID: 17479348.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    21. Crystal structure of the third KH domain of human poly(C)-binding protein-2 in complex with a C-rich strand of human telomeric DNA at 1.6 A resolution. Nucleic Acids Res. 2007; 35(8):2651-60. Fenn S, Du Z, Lee JK, Tjhen R, Stroud RM, James TL. PMID: 17426136; PMCID: PMC1885661.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansCells
    22. Nucleocapsid protein-mediated maturation of dimer initiation complex of full-length SL1 stemloop of HIV-1: sequence effects and mechanism of RNA refolding. Nucleic Acids Res. 2007; 35(6):2026-34. Mujeeb A, Ulyanov NB, Georgantis S, Smirnov I, Chung J, Parslow TG, James TL. PMID: 17341460; PMCID: PMC1874624.
      View in: PubMed   Mentions: 18     Fields:    Translation:Cells
    23. Synthesis and testing of a focused phenothiazine library for binding to HIV-1 TAR RNA. Chem Biol. 2006 Sep; 13(9):993-1000. Mayer M, Lang PT, Gerber S, Madrid PB, Pinto IG, Guy RK, James TL. PMID: 16984889.
      View in: PubMed   Mentions: 13     Fields:    Translation:Cells
    24. Pyruvate improves recovery after PARP-1-associated energy failure induced by oxidative stress in neonatal rat cerebrocortical slices. J Cereb Blood Flow Metab. 2007 Feb; 27(2):304-15. Zeng J, Yang GY, Ying W, Kelly M, Hirai K, James TL, Swanson RA, Litt L. PMID: 16736046.
      View in: PubMed   Mentions: 27     Fields:    Translation:AnimalsCells
    25. NMR structure of the full-length linear dimer of stem-loop-1 RNA in the HIV-1 dimer initiation site. J Biol Chem. 2006 Jun 09; 281(23):16168-77. Ulyanov NB, Mujeeb A, Du Z, Tonelli M, Parslow TG, James TL. PMID: 16603544.
      View in: PubMed   Mentions: 31     Fields:    Translation:Cells
    26. Refinement of Nucleic Acid Structures with Residual Dipolar Coupling Restraints in Cartesian Coordinate Space. Modern Magnetic Resonance, Edited by G.A. Webb. Dordrecht: Springer. 2006; 661-666. Ulyanov NB, Du Z, James TL. View Publication.
    27. Crystal structure of the first KH domain of human poly(C)-binding protein-2 in complex with a C-rich strand of human telomeric DNA at 1.7 A. J Biol Chem. 2005 Nov 18; 280(46):38823-30. Du Z, Lee JK, Tjhen R, Li S, Pan H, Stroud RM, James TL. PMID: 16186123.
      View in: PubMed   Mentions: 33     Fields:    Translation:HumansCells
    28. Discovery of ligands by a combination of computational and NMR-based screening: RNA as an example target. Methods Enzymol. 2005; 394:571-87. Mayer M, James TL. PMID: 15808238.
      View in: PubMed   Mentions: 3     Fields:    
    29. Methods in Enzymology, Nuclear Magnetic Resonance of Biological Macromolecules, Vol. 394, 631 pages. New York: Elsevier. 2005. James TL Editor).
    30. Structure-activity relationships of aminoglycoside-arginine conjugates that bind HIV-1 RNAs as determined by fluorescence and NMR spectroscopy. FEBS Lett. 2004 Nov 19; 577(3):415-21. Lapidot A, Vijayabaskar V, Litovchick A, Yu J, James TL. PMID: 15556620.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
    31. Solution structure of a consensus stem-loop D RNA domain that plays important roles in regulating translation and replication in enteroviruses and rhinoviruses. Biochemistry. 2004 Sep 28; 43(38):11959-72. Du Z, Yu J, Ulyanov NB, Andino R, James TL. PMID: 15379536.
      View in: PubMed   Mentions: 29     Fields:    Translation:Cells
    32. Specific recognition of the C-rich strand of human telomeric DNA and the RNA template of human telomerase by the first KH domain of human poly(C)-binding protein-2. J Biol Chem. 2004 Nov 12; 279(46):48126-34. Du Z, Yu J, Chen Y, Andino R, James TL. PMID: 15331611.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    33. Using 31P NMR spectroscopy at 14.1 Tesla to investigate PARP-1 associated energy failure and metabolic rescue in cerebrocortical slices. J Bioenerg Biomembr. 2004 Aug; 36(4):415-9. Zeng J, Hirai K, Yang GY, Ying W, Swanson RA, Kelly M, Mayer M, James TL, Litt L. PMID: 15377881.
      View in: PubMed   Mentions: 2     Fields:    Translation:Animals
    34. NMR structures of loop B RNAs from the stem-loop IV domain of the enterovirus internal ribosome entry site: a single C to U substitution drastically changes the shape and flexibility of RNA. Biochemistry. 2004 May 18; 43(19):5757-71. Du Z, Ulyanov NB, Yu J, Andino R, James TL. PMID: 15134450.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansCells
    35. PI3K inhibition in neonatal rat brain slices during and after hypoxia reduces phospho-Akt and increases cytosolic cytochrome c and apoptosis. Brain Res Mol Brain Res. 2004 Apr 29; 124(1):51-61. Hirai K, Hayashi T, Chan PH, Zeng J, Yang GY, Basus VJ, James TL, Litt L. PMID: 15093685.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCells
    36. Slow conformational dynamics in the hamster prion protein. Biochemistry. 2004 Apr 20; 43(15):4439-46. Kuwata K, Kamatari YO, Akasaka K, James TL. PMID: 15078089.
      View in: PubMed   Mentions: 16     Fields:    Translation:AnimalsCells
    37. NMR-based characterization of phenothiazines as a RNA binding scaffold. J Am Chem Soc. 2004 Apr 07; 126(13):4453-60. Mayer M, James TL. PMID: 15053636.
      View in: PubMed   Mentions: 44     Fields:    Translation:HumansCells
    38. NMR-detected hydrogen exchange and molecular dynamics simulations provide structural insight into fibril formation of prion protein fragment 106-126. Proc Natl Acad Sci U S A. 2003 Dec 09; 100(25):14790-5. Kuwata K, Matumoto T, Cheng H, Nagayama K, James TL, Roder H. PMID: 14657385; PMCID: PMC299804.
      View in: PubMed   Mentions: 43     Fields:    Translation:AnimalsCells
    39. Dynamic NMR structures of [Rp]- and [Sp]-phosphorothioated DNA-RNA hybrids: is flexibility required for RNase H recognition? Biophys J. 2003 Oct; 85(4):2525-38. Tonelli M, Ulyanov NB, Billeci TM, Karwowski B, Guga P, Stec WJ, James TL. PMID: 14507715; PMCID: PMC1303476.
      View in: PubMed   Mentions: 4     Fields:    Translation:Cells
    40. Extending the family of UNCG-like tetraloop motifs: NMR structure of a CACG tetraloop from coxsackievirus B3. Biochemistry. 2003 Apr 22; 42(15):4373-83. Du Z, Yu J, Andino R, James TL. PMID: 12693932.
      View in: PubMed   Mentions: 19     Fields:    Translation:Cells
    41. Temperature control of respiring rat brain slices during high field NMR spectroscopy. Brain Res Brain Res Protoc. 2003 Feb; 10(3):191-8. Litt L, Hirai K, Basus VJ, James TL. PMID: 12565690.
      View in: PubMed   Mentions: 5     Fields:    Translation:Animals
    42. NTP and PCr responses to hypoxia by hypothermic and normothermic respiring, superfused, neonatal rat cerebrocortical slices: an NMR spectroscopy study at 14.1 Tesla. Acta Neurochir Suppl. 2003; 86:71-4. Litt L, Hirai K, Basus VJ, James TL. PMID: 14753408.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    43. Akt phosphorylation and cell survival after hypoxia-induced cytochrome c release in superfused respiring neonatal rat cerebrocortical slices. Acta Neurochir Suppl. 2003; 86:227-30. Hirai K, Hayashi T, Chan PH, Basus VJ, James TL, Litt L. PMID: 14753441.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    44. A molecular switch underlies a human telomerase disease. Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26):16998-7003. Comolli LR, Smirnov I, Xu L, Blackburn EH, James TL. PMID: 12482936; PMCID: PMC139258.
      View in: PubMed   Mentions: 54     Fields:    Translation:HumansCells
    45. In vivo monitoring of hepatic glutathione in anesthetized rats by 13C NMR. Magn Reson Med. 2002 Sep; 48(3):430-9. Macdonald JM, Schmidlin O, James TL. PMID: 12210907.
      View in: PubMed   Mentions: 12     Fields:    Translation:Animals
    46. Structure of TAR RNA complexed with a Tat-TAR interaction nanomolar inhibitor that was identified by computational screening. Chem Biol. 2002 Jun; 9(6):707-12. Du Z, Lind KE, James TL. PMID: 12079782.
      View in: PubMed   Mentions: 39     Fields:    Translation:Cells
    47. High-resolution NMR structure of an AT-rich DNA sequence. J Biomol NMR. 2002 Mar; 22(3):265-80. Ulyanov NB, Bauer WR, James TL. PMID: 11991355.
      View in: PubMed   Mentions: 13     Fields:    Translation:Cells
    48. Structure-based computational database screening, in vitro assay, and NMR assessment of compounds that target TAR RNA. Chem Biol. 2002 Feb; 9(2):185-93. Lind KE, Du Z, Fujinaga K, Peterlin BM, James TL. PMID: 11880033.
      View in: PubMed   Mentions: 44     Fields:    Translation:HumansCells
    49. NMR structure of a gemcitabine-substituted model Okazaki fragment. Biochemistry. 2002 Jan 22; 41(3):839-46. Konerding D, James TL, Trump E, Soto AM, Marky LA, Gmeiner WH. PMID: 11790105.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
    50. The Encyclopedia of Molecular Medicine. Edited by T.E. Creighton. New York: John Wiley & Sons. 2002; 3100-3102. James TL. Tat Protein.
    51. The solution structure of the viral binding domain of Tva, the cellular receptor for subgroup A avian leukosis and sarcoma virus. FEBS Lett. 2001 Dec 07; 509(2):161-8. Tonelli M, Peters RJ, James TL, Agard DA. PMID: 11768384.
      View in: PubMed   Mentions: 16     Fields:    Translation:Cells
    52. Molten-globule structure and membrane binding of the N-terminal protease-resistant domain (63-193) of the steroidogenic acute regulatory protein (StAR). Biochem J. 2001 May 15; 356(Pt 1):151-8. Song M, Shao H, Mujeeb A, James TL, Miller WL. PMID: 11336647; PMCID: PMC1221823.
      View in: PubMed   Mentions: 9     Fields:    Translation:Cells
    53. Methods in Enzymology, Nuclear Magnetic Resonance of Biological Macromolecules, Part B, Vol. 339, 454 pages. New York: Academic Press. 2001. James TL, Dötsch V, Schmitz U (Editors).
    54. Methods in Enzymology, Nuclear Magnetic Resonance of Biological Macromolecules, Part A, Vol. 338, 480 pages . New York: Academic Press. 2001. James TL, Dötsch V, Schmitz U (Editors).
    55. Identification of ligands for RNA targets via structure-based virtual screening: HIV-1 TAR. J Comput Aided Mol Des. 2000 Aug; 14(6):593-610. Filikov AV, Mohan V, Vickers TA, Griffey RH, Cook PD, Abagyan RA, James TL. PMID: 10921774.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    56. The novel immunosuppressant SDZ-RAD protects rat brain slices from cyclosporine-induced reduction of high-energy phosphates. Br J Pharmacol. 2000 Feb; 129(3):485-92. Serkova N, Litt L, Leibfritz D, Hausen B, Morris RE, James TL, Benet LZ, Christians U. PMID: 10711346; PMCID: PMC1571863.
      View in: PubMed   Mentions: 7     Fields:    Translation:AnimalsCells
    57. Determination of the populations and structures of multiple conformers in an ensemble from NMR data: multiple-copy refinement of nucleic acid structures using floating weights. J Biomol NMR. 2000 Feb; 16(2):147-64. Görler A, Ulyanov NB, James TL. PMID: 10723994.
      View in: PubMed   Mentions: 9     Fields:    Translation:Cells
    58. Three-dimensional RNA structure-based drug discovery. J Biomol Struct Dyn. 2000; 17 Suppl 1:201-5. James TL, Lind KE, Filikov AV, Mujeeb A. PMID: 22607425.
      View in: PubMed   Mentions:    Fields:    
    59. Current Protocols in Nucleic Acid Chemistry. Edited by S.L. Beaucage, D.E. Bergstrom, G.D. Glick, and R.A. Jones. New York: John Wiley & Sons, Inc., 7.2. 2000; 1-15. James TL. NMR Determination of Oligonucleotide Structure.
    60. Structure, Motion, Interaction and Expression of Biological Macromolecules. Proc. Eleventh Conversation in Biomolecular Structure & Dynamics. Edited by RH Sarma and MH Sarma. New York: Adenine Press, 11. 2000; 201-205. James TL, Lind KE, Filikov, AV, Mujeeb A. Three-Dimensional RNA Structure-Based Drug Discovery.
    61. Structure of the phylogenetically most conserved domain of SRP RNA. RNA. 1999 Nov; 5(11):1419-29. Schmitz U, Behrens S, Freymann DM, Keenan RJ, Lukavsky P, Walter P, James TL. PMID: 10580470; PMCID: PMC1369863.
      View in: PubMed   Mentions: 17     Fields:    Translation:Cells
    62. NMR structure of the mature dimer initiation complex of HIV-1 genomic RNA. FEBS Lett. 1999 Sep 24; 458(3):387-92. Mujeeb A, Parslow TG, Zarrinpar A, Das C, James TL. PMID: 10570946.
      View in: PubMed   Mentions: 19     Fields:    Translation:Cells
    63. A Small-Molecule Guanidinium Receptor: The Arginine Cork. Angew Chem Int Ed Engl. 1999 Sep; 38(17):2543-2547. Bell TW, Khasanov AB, Drew MG, Filikov A, James TL. PMID: 10508332.
      View in: PubMed   Mentions: 3     Fields:    
    64. Structure of the most conserved internal loop in SRP RNA. Nat Struct Biol. 1999 Jul; 6(7):634-8. Schmitz U, James TL, Lukavsky P, Walter P. PMID: 10404218.
      View in: PubMed   Mentions: 10     Fields:    Translation:Cells
    65. Evaluation of individual and combined neurotoxicity of the immunosuppressants cyclosporine and sirolimus by in vitro multinuclear NMR spectroscopy. J Pharmacol Exp Ther. 1999 May; 289(2):800-6. Serkova N, Litt L, James TL, Sadée W, Leibfritz D, Benet LZ, Christians U. PMID: 10215655.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansAnimalsCells
    66. NOS inhibitors decrease hypoxia-induced ATP reductions in respiring cerebrocortical slices. Anesthesiology. 1999 May; 90(5):1392-401. Litt L, Espanol MT, Hasegawa K, Chang LH, Gregory GA, James TL, Beal MF, Chan PH. PMID: 10319788.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    67. Solution structure of Syrian hamster prion protein rPrP(90-231). Biochemistry. 1999 Apr 27; 38(17):5362-77. Liu H, Farr-Jones S, Ulyanov NB, Llinas M, Marqusee S, Groth D, Cohen FE, Prusiner SB, James TL. PMID: 10220323.
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    68. Restrained molecular dynamics of solvated duplex DNA using the particle mesh Ewald method. J Biomol NMR. 1999 Feb; 13(2):119-31. Konerding DE, Cheatham TE, Kollman PA, James TL. PMID: 10070753.
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    69. Quantitative measurement of transverse and longitudinal cross-correlation between 13C-1H dipolar interaction and 13C chemical shift anisotropy: application to a 13C-labeled DNA duplex. J Magn Reson. 1999 Feb; 136(2):169-75. Kojima C, Ono A, Kainosho M, James TL. PMID: 9986759.
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    70. Structural effect of complete [Rp]-phosphorothioate and phosphorodithioate substitutions in the DNA strand of a model antisense inhibitor-target RNA complex. J Mol Biol. 1999 Jan 29; 285(4):1609-22. Furrer P, Billeci TM, Donati A, Kojima C, Karwowski B, Sierzchala A, Stec W, James TL. PMID: 9917400.
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    71. Effect of cytarabine on the NMR structure of a model okazaki fragment from the SV40 genome. Biochemistry. 1999 Jan 26; 38(4):1166-75. Gmeiner WH, Konerding D, James TL. PMID: 9930976.
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    72. Structure Computation and Dynamics in Protein NMR, Biological Magnetic Resonance, Edited by LJ Berliner and N Rama Krishna. Vol. 17, New York: Plenum Publ Corp. 1999; 201-222. Mujeeb A, Ulyanov NB, Billeci, TM, Farr-Jones S, James TL. Conformational Ensemble Calculations: Analysis of Protein and Nucleic Acid NMR Data.
    73. DNA duplex dynamics: NMR relaxation studies of a decamer with uniformly 13C-labeled purine nucleotides. J Magn Reson. 1998 Dec; 135(2):310-33. Kojima C, Ono A, Kainosho M, James TL. PMID: 9878461.
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    74. Small structural ensembles for a 17-nucleotide mimic of the tRNA T psi C-loop via fitting dipolar relaxation rates with the quadratic programming algorithm. Biopolymers. 1998 Oct 15; 46(5):329-42. Schmitz U, Donati A, James TL, Ulyanov NB, Yao L. PMID: 9754029.
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    75. A pseudosquare knot structure of DNA in solution. Biochemistry. 1998 Sep 15; 37(37):12715-26. Ulyanov NB, Ivanov VI, Minyat EE, Khomyakova EB, Petrova MV, Lesiak K, James TL. PMID: 9737848.
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    76. Nuclear magnetic resonance structure of d(GCATATGATAG). d(CTATCATATGC): a consensus sequence for promoters recognized by sigma K RNA polymerase. Biochemistry. 1998 Aug 25; 37(34):11745-61. Tonelli M, Ragg E, Bianucci AM, Lesiak K, James TL. PMID: 9718297.
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    77. Insights into the dynamic nature of DNA duplex structure via analysis of nuclear Overhauser effect intensities. Biochemistry. 1998 Aug 18; 37(33):11478-87. Tonelli M, James TL. PMID: 9708983.
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    78. The three-dimensional structure of prion protein: implications for prion disease. Biochem Soc Trans. 1998 Aug; 26(3):481-6. Baldwin MA, James TL, Cohen FE, Prusiner SB. PMID: 9765900.
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    79. Structure of the dimer initiation complex of HIV-1 genomic RNA. Nat Struct Biol. 1998 Jun; 5(6):432-6. Mujeeb A, Clever JL, Billeci TM, James TL, Parslow TG. PMID: 9628479.
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    80. Structure-based design of ligands for protein basic domains: application to the HIV-1 Tat protein. J Comput Aided Mol Des. 1998 May; 12(3):229-40. Filikov AV, James TL. PMID: 9749367.
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    81. NMR spectroscopy and MRI investigation of a potential bioartificial liver. NMR Biomed. 1998 Apr; 11(2):55-66. Macdonald JM, Grillo M, Schmidlin O, Tajiri DT, James TL. PMID: 9608589.
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    82. Fructose-1,6-bisphosphate preserves adenosine triphosphate but not intracellular pH during hypoxia in respiring neonatal rat brain slices. Anesthesiology. 1998 Feb; 88(2):461-72. Espanol MT, Litt L, Hasegawa K, Chang LH, Macdonald JM, Gregory G, James TL, Chan PH. PMID: 9477067.
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    83. Biochemical Soc. Trans. 26. 1998; 481-486. Baldwin MA, James TL, Cohen FE, Prusiner SB. The Three-Dimensional Structure of PrP: Implications for Prion Disease.
    84. Nuclear Magnetic Resonance. Bethesda: Biophysical Society. Ch 1. 1998; 1-31. James TL. Fundamentals of NMR.
    85. NOE Intensities from Multiple Conformations in Solution Analyzed by the Complete Relaxation Matrix Approach. Appl. Magn. Reson. 1998; 15:401-406. A. Donati, C. Rossi, S. Martini, N.B. Ulyanov, and T.L. James. .
    86. Structure, Motion, Interaction and Expression of Biological Macromolecules. Proc. Tenth Conversation in Biomolecular Structure & Dynamics. Edited by RH Sarma and MH Sarma. New York: Adenine Press, 75-88. 1998. Ulyanov NB, Ivanov VI, Minyat EE, Khomyakova EB, Petrova MV, Lesiak K, James TL. Immobile Slipped-Loop Structures of DNA in Solution.
    87. Molecular Modeling and Structure Determination of Nucleic Acids, ACS Symposium Series, Edited by N.B. Leontis and J. Santa Lucia. American Chemical Society, 122-149. 1998. Lukavsky P, Billeci TM, James TL, Schmitz U. NMR Structure Determination of a 28-Nucleotide RNA from the Mammalian Signal Recognition Particle.
    88. Oxford Handbook of Nucleic Acid Structure, Edited by S. Neidle. Oxford: Oxford University Press. 1998; 253-294. Schmitz U, Blocker FJH, James TL. Standard DNA Duplexes and RNA-DNA Hybrids in Solution.
    89. Molecular Modeling and Structure Determination of Nucleic Acids, Symposium Series, Number XX. Edited by NB Leontis and J Santa Lucia. American Chemical Society, Washington, DC. 1998; 181-194. Ulyanov NB, Mujeeb A, Donati A, Furrer P, Liu H, Farr-Jones S, Konerding DE, Schmitz U, T.L. James TL. Determination of Structural Ensembles from NMR Data: Conformational Sampling and Probability Assessment.
    90. Structure of the recombinant full-length hamster prion protein PrP(29-231): the N terminus is highly flexible. Proc Natl Acad Sci U S A. 1997 Dec 09; 94(25):13452-7. Donne DG, Viles JH, Groth D, Mehlhorn I, James TL, Cohen FE, Prusiner SB, Wright PE, Dyson HJ. PMID: 9391046; PMCID: PMC28326.
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    91. A conformational transition at the N terminus of the prion protein features in formation of the scrapie isoform. J Mol Biol. 1997 Oct 31; 273(3):614-22. Peretz D, Williamson RA, Matsunaga Y, Serban H, Pinilla C, Bastidas RB, Rozenshteyn R, James TL, Houghten RA, Cohen FE, Prusiner SB, Burton DR. PMID: 9356250.
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    92. Solution structure of a 142-residue recombinant prion protein corresponding to the infectious fragment of the scrapie isoform. Proc Natl Acad Sci U S A. 1997 Sep 16; 94(19):10086-91. James TL, Liu H, Ulyanov NB, Farr-Jones S, Zhang H, Donne DG, Kaneko K, Groth D, Mehlhorn I, Prusiner SB, Cohen FE. PMID: 9294167; PMCID: PMC23313.
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    93. Evidence for protein X binding to a discontinuous epitope on the cellular prion protein during scrapie prion propagation. Proc Natl Acad Sci U S A. 1997 Sep 16; 94(19):10069-74. Kaneko K, Zulianello L, Scott M, Cooper CM, Wallace AC, James TL, Cohen FE, Prusiner SB. PMID: 9294164; PMCID: PMC23307.
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    94. Solution structure and backbone dynamics of the human alpha3-chain type VI collagen C-terminal Kunitz domain,. Biochemistry. 1997 Aug 26; 36(34):10439-50. Sorensen MD, Bjorn S, Norris K, Olsen O, Petersen L, James TL, Led JJ. PMID: 9265624.
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    95. The dynamic NMR structure of the T psi C-loop: implications for the specificity of tRNA methylation. J Biomol NMR. 1997 Apr; 9(3):229-44. Yao LJ, James TL, Kealey JT, Santi DV, Schmitz U. PMID: 9204554.
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    96. Physical studies of conformational plasticity in a recombinant prion protein. Biochemistry. 1997 Mar 25; 36(12):3543-53. Zhang H, Stockel J, Mehlhorn I, Groth D, Baldwin MA, Prusiner SB, James TL, Cohen FE. PMID: 9132005.
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    97. High-resolution NMR of an antisense DNA x RNA hybrid containing alternating chirally pure Rp methylphosphonates in the DNA backbone. Biochemistry. 1997 Mar 04; 36(9):2371-9. Mujeeb A, Reynolds MA, James TL. PMID: 9054542.
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    98. NMR Spectroscopy of Biomolecules, Edited by J.L. Markley and S.J. Opella. New York: Oxford University Press, 340-357. 1997. Litt L, Espanol MT, Xu Y, Cohen Y, Chang L-H, P.R. Weinstein PR, Chan PH, James TL. Ex Vivo Multinuclear NMR Spectroscopy of Perfused, Respiring Rat Brain Slices: Model Studies of Hypoxia, Ischemia, and Excitotoxicity.
    99. NMR studies of the most conserved RNA domain of the mammalian signal recognition particle (SRP). RNA. 1996 Dec; 2(12):1213-27. Schmitz U, Freymann DM, James TL, Keenan RJ, Vinayak R, Walter P. PMID: 8972771; PMCID: PMC1369449.
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    100. Correcting NOESY cross-peak intensities for partial relaxation effects enabling accurate distance information. J Magn Reson B. 1996 Apr; 111(1):85-9. Liu H, Tonelli M, James TL. PMID: 8620288.
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    101. Aqueous solution structure of a hybrid lentiviral Tat peptide and a model of its interaction with HIV-1 TAR RNA. J Biomol Struct Dyn. 1996 Feb; 13(4):649-60. Mujeeb A, Parslow TG, Yuan YC, James TL. PMID: 8906885.
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    102. Adult rat brain-slice preparation for nuclear magnetic resonance spectroscopy studies of hypoxia. Anesthesiology. 1996 Jan; 84(1):201-10. Espanol MT, Litt L, Chang LH, James TL, Weinstein PR, Chan PH. PMID: 8572333.
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    103. NMR as a Structural Tool for Macromolecules: Current Status and Future Directions, Edited by B.D. Nageswara Rao and M.D. Kemple. New York: Plenum Publishing Corp., 191-206. 1996. T.L. James TL, Gonzalez C, Liu, H, Schmitz U, Ulyanov NB. Dynamic Structure of Nucleic Acid Duplexes.
    104. Biological Structure and Dynamics, Proceedings of the Ninth Conversation in Biomolecular Structure and Dynamics. Edited by R.H. Sarma and M.H. Sarma. New York: Adenine Press, Vol. 2, 165-187. 1996. Schmitz U, Gonzales C, Ulyanov NB, Blocker, FH, Liu H, James TL. Structural Ensembles from NMR Data: Applications to Nucleic Acids.
    105. Peptides: Chemistry, Structure and Biology, Edited by P.T.P. Kaumaya and R.S. Hodges. Leiden: ESCOM Science Publishers B.V., 468-470. 1996. Baldwin MA, Zhang H, Bekker T, Zhou S, Nguyen JT, Kolbert AC, Heller J, James TL, Wemmer DE, Pines A, Cohen FE, Prusiner SB. Synthetic Peptides Model a-helix-b-sheet Conformational Changes in the Prion Protein.
    106. Interproton distance bounds from 2D NOE intensities: effect of experimental noise and peak integration errors. J Biomol NMR. 1995 Dec; 6(4):390-402. Liu H, Spielmann HP, Ulyanov NB, Wemmer DE, James TL. PMID: 8563467.
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    107. Conformational transitions in peptides containing two putative alpha-helices of the prion protein. J Mol Biol. 1995 Jul 21; 250(4):514-26. Zhang H, Kaneko K, Nguyen JT, Livshits TL, Baldwin MA, Cohen FE, James TL, Prusiner SB. PMID: 7542350.
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    108. Structure and dynamics of a DNA.RNA hybrid duplex with a chiral phosphorothioate moiety: NMR and molecular dynamics with conventional and time-averaged restraints. Biochemistry. 1995 Apr 18; 34(15):4969-82. González C, Stec W, Reynolds MA, James TL. PMID: 7711019.
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    109. Deriving accurate interproton distances from ROESY spectra with limited knowledge of scalar coupling constants via the CARNIVAL algorithm. An iterative complete-relaxation-matrix approach. J Magn Reson B. 1995 Apr; 107(1):51-9. Liu H, Banville DL, Basus VJ, James TL. PMID: 7743074.
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    110. Statistical analysis of DNA duplex structural features. Methods Enzymol. 1995; 261:90-120. Ulyanov NB, James TL. PMID: 8569515.
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    111. How to generate accurate solution structures of double-helical nucleic acid fragments using nuclear magnetic resonance and restrained molecular dynamics. Methods Enzymol. 1995; 261:3-44. Schmitz U, James TL. PMID: 8569500.
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    112. Probability assessment of conformational ensembles: sugar repuckering in a DNA duplex in solution. Biophys J. 1995 Jan; 68(1):13-24. Ulyanov NB, Schmitz U, Kumar A, James TL. PMID: 7711233; PMCID: PMC1281656.
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    113. Methods in Enzymology, Nuclear Magnetic Resonance and Nucleic Acids, Vol. 261, 644 pages. New York: Academic Press. 1995. James TL (Editor).
    114. Methods in Enzymology, Nuclear Magnetic Resonance and Nucleic Acids. Edited by T.L. James. New York: Academic Press, Vol. 261. 1995; 90-121. Ulyanov NB, James TL. Statistical Analysis of DNA Duplex Structural Features.
    115. Encyclopedia of Nuclear Magnetic Resonance. Edited by D.M. Grant and R.K. Harris. New York: John Wiley & Sons, 3320-3331. 1995. James TL. Determination of Sequence-Dependent Nucleic Acid Structures in Solution.
    116. Encyclopedia of Nuclear Magnetic Resonance. Edited by D.M. Grant and R.K. Harris. New York: John Wiley & Sons. 1995. James TL. Historical Sketch: Time for Preparation and Evolution. But What is the Mechanism for Relaxation?.
    117. Methods in Enzymology, Nuclear Magnetic Resonance and Nucleic Acids, Edited by T.L. James. New York: Academic Press, Vol. 261, 3-44. 1995. Schmitz U, James TL. How to Generate Accurate Solution Structures of Double-Helical Nucleic Acid Fragments Using Nuclear Magnetic Resonance and Restrained Molecular Dynamics.
    118. Tertiary base pair interactions in slipped loop-DNA: an NMR and model building study. Nucleic Acids Res. 1994 Oct 11; 22(20):4242-9. Ulyanov NB, Bishop KD, Ivanov VI, James TL. PMID: 7937152; PMCID: PMC331933.
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    119. Structural study of a DNA.RNA hybrid duplex with a chiral phosphorothioate moiety by NMR: extraction of distance and torsion angle constraints and imino proton exchange rates. Biochemistry. 1994 Sep 20; 33(37):11062-72. González C, Stec W, Kobylanska A, Hogrefe RI, Reynolds M, James TL. PMID: 7537083.
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    120. NMR structure of a biologically active peptide containing the RNA-binding domain of human immunodeficiency virus type 1 Tat. Proc Natl Acad Sci U S A. 1994 Aug 16; 91(17):8248-52. Mujeeb A, Bishop K, Peterlin BM, Turck C, Parslow TG, James TL. PMID: 8058789; PMCID: PMC44583.
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    121. 19F NMR calcium changes, edema and histology in neonatal rat brain slices during glutamate toxicity. Brain Res. 1994 May 30; 647(1):172-6. Espanol MT, Litt L, Xu Y, Chang LH, James TL, Weinstein PR, Chan PH. PMID: 7915186.
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    122. Modulation of glutamate-induced intracellular energy failure in neonatal cerebral cortical slices by kynurenic acid, dizocilpine, and NBQX. J Cereb Blood Flow Metab. 1994 Mar; 14(2):269-78. Espanol MT, Xu Y, Litt L, Yang GY, Chang LH, James TL, Weinstein P, Chan PH. PMID: 7906691.
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    123. Hepatitis B virus direct repeat sequence: imino proton exchange rates and distance and torsion angle restraints from NMR. Biochemistry. 1994 Jan 18; 33(2):427-38. Bishop KD, Blocker FJ, Egan W, James TL. PMID: 8286373.
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    124. Solution structure of the octamer motif in immunoglobulin genes via restrained molecular dynamics calculations. Biochemistry. 1994 Jan 11; 33(1):354-66. Weisz K, Shafer RH, Egan W, James TL. PMID: 8286357.
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    125. Assessment of quality of derived macromolecular structures. Methods Enzymol. 1994; 239:416-39. James TL. PMID: 7830593.
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    126. Study of Biological Macromolecules by Nuclear Magnetic Resonance Spectroscopy. Edited by C.L. Stassinopoulou. NATO ASI Series Volume. Berlin: Springer-Verlag , Vol H87. 1994; 335-348. James TL, Bishop KD, Blocker F, Gonzalez C, Kumar A, Liu H, Mujeeb A, Schmitz U, Ulyanov NB, Yuan Y-C, Weisz K. Determination of High-Resolution, Sequence-Dependent DNA Duplex Structures in Solution.
    127. Book Review on "Nucleic Acid Targeted Drug Design. Edited by C.L. Propst and T.J. Perun. New York: Marcel Dekker, 1992". 1994. James TL. J. Amer. Chem. Soc., 116, 9412.
    128. Reduction of superoxide dismutase activity correlates with visualization of edema by T2-weighted MR imaging in focal ischemic rat brain. Neurol Med Chir (Tokyo). 1994 Jan; 34(1):1-9. Imaizumi S, Chang L, Cohen Y, Chan PH, Weinstein PR, Yoshimoto T, James TL. PMID: 7514745.
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    129. Proceedings of the Twenty-Third European Peptide Symposium. Edited by H.L.S. Maia, Leiden: ESCOM Science Publishers B.V., 580-581. 1994. Baldwin MA, Nguyen JT, Zhang H, Pan KM, Huang Z, Livshits TL, Kaneko K, Cohen FE, James TL, Prusiner SB. Conformational Changes in the Prion Protein Can be Simulated with Synthetic Peptides.
    130. Modulation of edema by dizocilpine, kynurenate, and NBQX in respiring brain slices after exposure to glutamate. Acta Neurochir Suppl (Wien). 1994; 60:58-61. Espanol MT, Xu Y, Litt L, Chang LH, James TL, Weinstein PR, Chan PH. PMID: 7976656.
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    131. Computational Strategies Pertinent to NMR Solution Structure Determination. Current Opinion in Structural Biology. 1994; 4:275-284. James, T.L.
    132. Structural Biology: The State of the Art. Proc. Eighth Conversation in Biomolecular Structure & Dynamics. Vol. 2, pp. 251-272. Edited by R.H. Sarma and M.H. Sarma. New York: Adenine Press. 1994. James TL. High Resolution DNA Solution Structures: Genome Target Refinement Using Interproton Distance and Torsion Angle Restraints.
    133. Methods in Enzymology, Nuclear Magnetic Resonance, Part C. Vol 239, 813 pages. New York: Academic Press. 1994. James TL, Oppenheimer NJ (Editors).
    134. Methods in Enzymology, Nuclear Magnetic Resonance, Part C. Edited by T.L. James and N.J. Oppenheimer. New York: Academic Press, Vol. 239. 1994; 416-439. James TL. Assessment of the Quality of Derived Macromolecular Structures.
    135. Solution structure of a conserved DNA sequence from the HIV-1 genome: restrained molecular dynamics simulation with distance and torsion angle restraints derived from two-dimensional NMR spectra. Biochemistry. 1993 Dec 14; 32(49):13419-31. Mujeeb A, Kerwin SM, Kenyon GL, James TL. PMID: 8257678.
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    136. Molecular dynamics with weighted time-averaged restraints for a DNA octamer. Dynamic interpretation of nuclear magnetic resonance data. J Mol Biol. 1993 Nov 20; 234(2):373-89. Schmitz U, Ulyanov NB, Kumar A, James TL. PMID: 8230221.
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    137. Metropolis Monte Carlo calculations of DNA structure using internal coordinates and NMR distance restraints: an alternative method for generating a high-resolution solution structure. J Biomol NMR. 1993 Sep; 3(5):547-68. Ulyanov NB, Schmitz U, James TL. PMID: 8219740.
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    138. Nonmagnetic hyperbaric chamber for in vivo NMR spectroscopy studies of small animals. Magn Reson Med. 1993 Jun; 29(6):812-6. Litt L, Xu Y, Cohen Y, James TL. PMID: 8350725.
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    139. Relationship between extracellular neurotransmitter amino acids and energy metabolism during cerebral ischemia in rats monitored by microdialysis and in vivo magnetic resonance spectroscopy. Brain Res. 1993 Mar 05; 605(1):33-42. Shimizu H, Graham SH, Chang LH, Mintorovitch J, James TL, Faden AI, Weinstein PR. PMID: 8096789.
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    140. Assessment of in situ renal transplant viability by 31P-MRS: experimental study in canines. Am Surg. 1993 Mar; 59(3):182-7. Bretan PN, Vigneron DB, Hricak H, Price DC, Yen TS, Luo JA, Tanagho EA, James TL. PMID: 8386489.
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    141. Citrate alterations in primary and metastatic human prostatic adenocarcinomas: 1H magnetic resonance spectroscopy and biochemical study. Magn Reson Med. 1993 Feb; 29(2):149-57. Kurhanewicz J, Dahiya R, Macdonald JM, Chang LH, James TL, Narayan P. PMID: 8429778.
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    142. Effect of glucose and confluency on phosphorus metabolites of perfused human prostatic adenocarcinoma cells as determined by 31P MRS. Magn Reson Med. 1993 Feb; 29(2):244-8. Macdonald JM, Kurhanewicz J, Dahiya R, Espanol MT, Chang LH, Goldberg B, James TL, Narayan P. PMID: 8429789.
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    143. Extracting Accurate Distances and Bounds from 2D NOE Exchangeable Proton Peaks. J. Am. Chem Soc. 1993; 115:1590-1591. Liu, H., Kumar, A., Weisz, K., Schmitz, U., Bishop, K.D., and James, T.L.
    144. New Methods in Drug Research, Vol. 4. Edited by A. Makriannis. Barcelona: Prous. 1993. James TL, Kerwood DJ, Gochin M, Mills PA, Borgias BA, Basus VJ. Refinement of Three-Dimensional Protein and DNA Structures in Solution from Two-Dimensional NMR Spectra.
    145. J. Magn. Reson. 1993. Liu, H., Weisz, K. and James, T.L. Tailored Excitation by Shaped RF Pulses: Optimization and Implementation of Excitation Containing a Notch.
    146. Monte Carlo calculations of ion distributions surrounding the oligonucleotide d(ATATATATAT)2 in the B, A, and wrinkled D conformations. Biopolymers. 1992 Nov; 32(11):1491-501. Mills PA, Rashid A, James TL. PMID: 1457729.
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    147. Effect of dichloroacetate on recovery of brain lactate, phosphorus energy metabolites, and glutamate during reperfusion after complete cerebral ischemia in rats. J Cereb Blood Flow Metab. 1992 Nov; 12(6):1030-8. Chang LH, Shimizu H, Abiko H, Swanson RA, Faden AI, James TL, Weinstein PR. PMID: 1356994.
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    148. Tolerance of low intracellular pH during hypercapnia by rat cortical brain slices: A 31P/1H NMR study. J Neurochem. 1992 Nov; 59(5):1820-8. Espanol MT, Litt L, Yang GY, Chang LH, Chan PH, James TL, Weinstein PR. PMID: 1402924.
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    149. A potential gene target in HIV-1: rationale, selection of a conserved sequence, and determination of NMR distance and torsion angle constraints. Biochemistry. 1992 Oct 06; 31(39):9325-38. Mujeeb A, Kerwin SM, Egan W, Kenyon GL, James TL. PMID: 1327112.
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    150. Solution structure of a DNA octamer containing the Pribnow box via restrained molecular dynamics simulation with distance and torsion angle constraints derived from two-dimensional nuclear magnetic resonance spectral fitting. J Mol Biol. 1992 Sep 20; 227(2):510-31. Schmitz U, Sethson I, Egan WM, James TL. PMID: 1404366.
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    151. The octamer motif in immunoglobulin genes: extraction of structural constraints from two-dimensional NMR studies. Biochemistry. 1992 Aug 25; 31(33):7477-87. Weisz K, Shafer RH, Egan W, James TL. PMID: 1510934.
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    152. Solution structure of the EcoRI DNA octamer containing 5-fluorouracil via restrained molecular dynamics using distance and torsion angle constraints extracted from NMR spectral simulations. Biochemistry. 1992 Aug 11; 31(31):7027-42. Stolarski R, Egan W, James TL. PMID: 1643037.
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    153. Phosphorus metabolite characterization of human prostatic adenocarcinoma in a nude mouse model by 31P magnetic resonance spectroscopy and high pressure liquid chromatography. NMR Biomed. 1992 Jul-Aug; 5(4):185-92. Kurhanewicz J, Dahiya R, Macdonald JM, Jajodia P, Chang LH, James TL, Narayan P. PMID: 1449954.
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    154. Correlations between in vivo 31P MRS measurements, tumor size, cell survival, and hypoxic fraction in the murine EMT6 tumor. Magn Reson Med. 1992 Jun; 25(2):217-32. Wendland MF, Iyer SB, Fu KK, Lam KN, James TL. PMID: 1614307.
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    155. Effects of hyperglycemia on the time course of changes in energy metabolism and pH during global cerebral ischemia and reperfusion in rats: correlation of 1H and 31P NMR spectroscopy with fatty acid and excitatory amino acid levels. J Cereb Blood Flow Metab. 1992 May; 12(3):456-68. Widmer H, Abiko H, Faden AI, James TL, Weinstein PR. PMID: 1569139.
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    156. H-NMR studies on d(GCTTAAGC)2 and its complex with berenil. Eur J Biochem. 1992 Feb 15; 204(1):31-8. Hu SH, Weisz K, James TL, Shafer RH. PMID: 1740143.
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    157. Dynamic Interpretation of NMR Data: Molecular Dynamics with Weighted Time-Averaged Restraints and Ensemble R-Factor. J. Am. Chem. Soc. 1992; 114:10654-10655. Schmitz, U., Kumar, A. and James, T.L.
    158. Detection of Phosphorus Metabolites in Human Prostrates with a Transrectal Phosphorus-31 NMR Probe. J. Magn. Reson. 1992; 99:377-386. Thomas, M.A., Narayan, P., Kurhanewicz, J., Jajodia, P., James, T.L., and Weiner, M.
    159. Macromolecule Structure Refinement by Relaxation Matrix Analysis of 2D NOE Spectra: Effect of Differential Internal Motion on Internuclear Distance Determination in Proteins. Israel J. of Chem. 1992; 32:257-261. Kumar, A., James, T.L., and Levy, G.C.
    160. Biol Magn Reson, Edited by L.J. Berliner and J. Reuben. New York: Plenum Press. 1992; 135-158. Chang L-H, James TL. NMR Methods in Studies of Brain Ischemia.
    161. Solvent-Suppression Pulses. III. Design Using Simulated-Annealing Optimization with in Vitro and in Vivo Testing. J Magn Reson. 1992; 96:345-362. Smith V, Kurhanewicz J, James TL.
    162. Refinement of Three-Dimensional Biopolymer Structures in Solution Using NMR Data. Chemical Design Automation News. 1992; 7:19-27. James, TL.
    163. Averaging of Cross-Relaxation Rates and Distances for Methyl, Methylene and Aromatic Ring Protons Due to Motion or Overlap: Extraction of Accurate Distances Iteratively via Relaxation Matrix Analysis of 2D NOE Spectra. J. Magn. Reson. 1992; 98:163-175. Liu, H., Thomas, P.D., and James, T.L.
    164. 31P spectroscopy of the human prostate gland in vivo using a transrectal probe. Magn Reson Med. 1991 Dec; 22(2):404-13. Kurhanewicz J, Thomas A, Jajodia P, Weiner MW, James TL, Vigneron DB, Narayan P. PMID: 1725918.
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    165. Tolerance of low cerebral intracellular pH in rats during hyperbaric hypercapnia. Stroke. 1991 Oct; 22(10):1303-8. Xu Y, Cohen Y, Litt L, Chang LH, James TL. PMID: 1926243.
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    166. Solution structure of [d(GTATATAC)]2 via restrained molecular dynamics simulations with nuclear magnetic resonance constraints derived from relaxation matrix analysis of two-dimensional nuclear Overhauser effect experiments. J Mol Biol. 1991 Sep 05; 221(1):271-92. Schmitz U, Pearlman DA, James TL. PMID: 1920410.
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    167. Characterization of prostate cancer, benign prostatic hyperplasia and normal prostates using transrectal 31phosphorus magnetic resonance spectroscopy: a preliminary report. J Urol. 1991 Jul; 146(1):66-74. Narayan P, Jajodia P, Kurhanewicz J, Thomas A, MacDonald J, Hubesch B, Hedgcock M, Anderson CM, James TL, Tanagho EA, et al. PMID: 1711587.
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    168. Structure determination of [d(ATATATAUAT)]2 via two-dimensional NOE spectroscopy and molecular dynamics calculations. Eur J Biochem. 1991 May 08; 197(3):583-95. Kerwood DJ, Zon G, James TL. PMID: 2029892.
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    169. Protein solution structure determination using distances from two-dimensional nuclear Overhauser effect experiments: effect of approximations on the accuracy of derived structures. Proc Natl Acad Sci U S A. 1991 Feb 15; 88(4):1237-41. Thomas PD, Basus VJ, James TL. PMID: 1996325; PMCID: PMC50992.
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    170. Interleaved 1H and 31P spectroscopic imaging for studying regional brain injury. Magn Reson Imaging. 1991; 9(2):223-7. Chang LH, Cohen Y, Weinstein PR, Chileuitt L, James TL. PMID: 2034056.
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    171. Relaxation Matrix Analysis of Two-Dimensional Nuclear Overhauser Effect Spectra to Obtain Accurate Biomolecular Structural Constraints and to Assess Structural Quality. Current Opinion in Structural Biology. 1991; 1:1042-1053. James TL.
    172. Generation of high-resolution protein structures in solution from multidimensional NMR. Annu Rev Phys Chem. 1991; 42:501-42. James TL, Basus VJ. PMID: 1747192.
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    173. Surface coil spectroscopic imaging: time and spatial evolution of lactate production following fluid percussion brain injury. Magn Reson Med. 1991 Jan; 17(1):225-36. Cohen Y, Sanada T, Pitts LH, Chang LH, Nishimura MC, Weinstein PR, Litt L, James TL. PMID: 2067397.
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    174. Ann NY Acad Sci, 625,. 1991; 707-724. Litt L, Lockhart S, Cohen Y, Yasuda N, Kim F, Freire B, Laster M, Peterson N, Taheri S, Chang L-H, Sessler DI, Moseley M, Eger II EI, James TL. In Vivo 19F NMR Brain Studies of Halothane, Isoflurane, and Desflurane: Rapid Elimination and No Abundant Saturable Binding.
    175. Computational Aspects of the Study of Biological Macromolecules by NMR. Edited by J.C. Hoch, F.M. Poulsen, and D. Redfield. NATO ASI Series, Vol. 225. New York: Plenum Press. 1991; 331-347. James TL, Gochin M, Kerwood DJ, Pearlman DA, Schmitz U, Thomas PD. Refinement of Three-Dimensional Protein and DNA Structures in Solution from NMR Data.
    176. Conformations and Forces in Protein Folding, Edited by B.T. Nall and K.A. Dill. Washington: Amer Soc Adv Sci. 1991; 86-114. Naderi HM, Thomason JF, Borgias BA, Anderson S, James TL, I.D. Kuntz ID. 1H NMR Assignments and Three-Dimensional Structure of Ala14/Ala38 Bovine Pancreatic Trypsin Inhibitor Based on Two-Dimensional NMR and Distance Geometry.
    177. NMR and Biomolecular Structure, Edited by I. Bertini, H. Molinari, and N. Niccolai. Weinheim: VCH Verlagsgesellschaft. 1991; 87-111. James TL, Borgias B, Bianucci AM, Zhou N. Solution Structure Refinement Using Complete Relaxation Matrix Analysis of 2D NOE Experiments: DNA Fragments.
    178. Solvent-Suppression Pulses. I. Design Using Optimal Control Theory. J Magn Reson. 1991; 95:41-60. Smith V, Kurhanewicz J, James TL.
    179. Solvent-Suppression Pulses. II. In Vitro and In Vivo Testing of Optimal Control Theory Pulses. J Magn Reson. 1991; 95:61-70. Smith V, Kurhanewicz J, James TL.
    180. Ann. Rev. Phys. Chem. 42, 501-542. 1991. James TL, Basus VJ. Generation of High-Resolution Protein Structures in Solution from Multidimensional NMR.
    181. Solution structure studies of d(AC)4.d(GT)4 via restrained molecular dynamics simulations with NMR constraints derived from two-dimensional NOE and double-quantum-filtered COSY experiments. Biochemistry. 1990 Dec 25; 29(51):11172-80. Gochin M, James TL. PMID: 2271704.
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    182. Two-dimensional COSY and two-dimensional NOE spectroscopy of d(AC)4.d(GT)4: extraction of structural constraints. Biochemistry. 1990 Dec 25; 29(51):11161-71. Gochin M, Zon G, James TL. PMID: 2271703.
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    183. Opiate-receptor antagonist improves metabolic recovery and limits neurochemical alterations associated with reperfusion after global brain ischemia in rats. J Pharmacol Exp Ther. 1990 Nov; 255(2):451-8. Faden AI, Shirane R, Chang LH, James TL, Lemke M, Weinstein PR. PMID: 2243336.
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    184. Absence of abundant binding sites for anesthetics in rabbit brain: an in vivo NMR study. Anesthesiology. 1990 Sep; 73(3):455-60. Lockhart SH, Cohen Y, Yasuda N, Kim F, Litt L, Eger EI, Chang LH, James T. PMID: 2393130.
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    185. Correlations between in vivo 31P NMR spectroscopy measurements, tumor size, hypoxic fraction and cell survival after radiotherapy. Int J Radiat Oncol Biol Phys. 1990 Jun; 18(6):1341-50. Fu KK, Wendland MF, Iyer SB, Lam KN, Engeseth H, James TL. PMID: 2370183.
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    186. Deoxyribose conformation in [d(GTATATAC)]2: evaluation of sugar pucker by simulation of double-quantum-filtered COSY cross-peaks. Biochemistry. 1990 Mar 06; 29(9):2357-68. Schmitz U, Zon G, James TL. PMID: 2337605.
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    187. Stability of brain intracellular lactate and 31P-metabolite levels at reduced intracellular pH during prolonged hypercapnia in rats. J Cereb Blood Flow Metab. 1990 Mar; 10(2):277-84. Cohen Y, Chang LH, Litt L, Kim F, Severinghaus JW, Weinstein PR, Davis RL, Germano I, James TL. PMID: 2303543.
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    188. Cerebral metabolite dynamics during temporary complete ischemia in rats monitored by time-shared 1H and 31P NMR spectroscopy. Magn Reson Med. 1990 Jan; 13(1):6-13. Chang LH, Shirane R, Weinstein PR, James TL. PMID: 2319935.
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    189. Progress in Nuclear Magnetic Resonance Spectroscopy, Edited by J.W. Emsley, J. Feeney, and L.H. Sutcliffe. Oxford: Pergamon Press. 1990; 83-100. Borgias BA, Gochin M, Kerkwood DJ, James TL. Relaxation Matrix Analysis of 2D NMR Data .
    190. MARDIGRAS –– A Procedure for Matrix Analysis of Relaxation for Discerning Geometry of an Aqueous Structure. J Magn Reson. 1990; 87:475-487. Borgias BA, James TL.
    191. Frontiers of NMR in Molecular Biology, UCLA Symposium on Molecular and Cellular Biology, Vol. 109, Edited by D. Live, I. Armitage, and D. Patel. New York: Alan R. Liss, Inc. 1990; 271-274. James TL. DNA/RNA and Ligand Interactions.
    192. NMR Applications in Biopolymers, Edited by J.W. Finley, S.J. Schmidt, and J.S. Serianni. New York: Plenum Press. 1990; 135-154. James TL, Borgias BA, Bianucci AM, Zhou N. Determination of DNA and Protein Structure in Solution via Complete Relaxation Matrix Analysis of 2D NOE Spectra.
    193. Determination of DNA and protein structures in solution via complete relaxation matrix analysis of 2D NOE spectra. Basic Life Sci. 1990; 56:135-54. James TL, Borgias BA, Bianucci AM, Zhou N. PMID: 2078169.
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    194. Frontiers of NMR in Molecular Biology, UCLA Symposium on Molecular and Cellular Biology, Vol. 109, Edited by D. Live, I. Armitage, and D. Patel. New York: Alan R. Liss, Inc. 1990; 177-187. James TL, Borgias BA. Determination of DNA and Protein Structures via Complete Relaxation Matrix Analysis of 2D NOE Spectra.
    195. Biol Magn Reson. 1990; 119-155. Borgias BA, James TL. Structure Determination via Complete Relaxation Matrix Analysis (CORMA) of Two-Dimensional Nuclear Overhauser Effect Spectra: DNA Fragments. Edited by LJ Berliner and Reuben J. New York: Plenum Press.
    196. P-31 MR spectroscopy in assessing testicular torsion: rat model. Radiology. 1989 Sep; 172(3):753-7. Tzika AA, Vigneron DB, Hricak H, Moseley ME, James TL, Kogan BA. PMID: 2772183.
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    197. Transrectal probe for 1H MRI and 31P MR spectroscopy of the prostate gland. Magn Reson Med. 1989 Aug; 11(2):209-20. Narayan P, Vigneron DB, Jajodia P, Anderson CM, Hedgcock MW, Tanagho EA, James TL. PMID: 2674600.
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    198. Androgen sensitivity of rat prostate carcinoma studied by 31P NMR spectroscopy, 1H MR imaging, and 23Na MR imaging. Magn Reson Med. 1989 Aug; 11(2):152-60. Vigneron DB, Hricak H, James TL, Jajodia PB, Nunes L, Narayan P. PMID: 2779408.
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    199. Binding of actinomycin D to [d(ATCGAT)]2: NMR evidence of multiple complexes. Biochemistry. 1989 Jun 13; 28(12):5231-9. Zhou N, James TL, Shafer RH. PMID: 2548605.
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    200. Effects of perfusion pressure on energy and work of isolated rat hearts. Hypertension. 1989 May; 13(5):480-8. Watters T, Wikman-Coffelt J, Wu S, James TL, Sievers R, Parmley WW. PMID: 2722227.
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    201. Assessment of male infertility: correlation between results of semen analysis and phosphorus-31 magnetic resonance spectroscopy. Urology. 1989 Feb; 33(2):116-9. Bretan PN, Vigneron DB, McClure RD, Hricak H, Tom RA, Moseley M, Tanagho EA, James TL. PMID: 2916284.
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    202. Methods in Enzymology, Nuclear Magnetic Resonance, Part A: Spectral Techniques and Dynamics. Vol 176, 530 pages. New York: Academic Press. 1989. Oppenheimer NJ, James TL (Editors).
    203. Methods in Enzymology, Nuclear Magnetic Resonance, Part B: Structure and Mechanism, Vol. 177, 507 pages. New York: Academic Press. 1989. Oppenheimer NJ, James TL (Editors).
    204. Methods in Enzymology, NMR Techniques, Part A: Spectral Techniques and Dynamics,Vol 176, Edited by NJ Oppenheimer and TL James. New York: Academic Press. 1989; 169-183. Borgias BA, James TL. 2D NOE Complete Relaxation Matrix Analysis.
    205. Neurotransmission and Cerebrovascular Function, Vol. I, Edited by J Seylaz & T MacKenzie. Amsterdam: Elsevier. 1989; 423-427. Cohen Y, Chang L-H, Litt L, James TL. In Vivo Measurements of Brain Glutamate/Glutamine Using 1H NMR Spectroscopy: Problems and Promises.
    206. Spatially Localized COSY Spectra from a Surface Coil Using Phase-Encoding Magnetic Field Gradients. J Magn Reson. 1989; 85:203-208. Cohen Y, Chang L-H, Litt L, James TL.
    207. Complete and partial ureteral obstruction: evaluation of renal effects with P-31 MR spectroscopy and Tc-DMSA scintigraphy. Radiology. 1988 Sep; 168(3):645-50. Vigneron DB, Tzika AA, Hricak H, Price DC, Bretan P, Aboseif S, Müller S, James TL. PMID: 2841718.
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    208. Deoxyribose ring conformation of [d(GGTATACC)]2: an analysis of vicinal proton-proton coupling constants from two-dimensional proton nuclear magnetic resonance. Biochemistry. 1988 Aug 09; 27(16):6013-20. Zhou N, Manogaran S, Zon G, James TL. PMID: 2847781.
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    209. Biochemical regulation of developed intraventricular systolic pressure. Am Heart J. 1988 Apr; 115(4):876-91. Wikman-Coffelt J, Wu ST, Watters T, James TL, Parmley WW, Mason DT. PMID: 2451413.
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    210. Improvement in myocardial performance without a decrease in high-energy phosphate metabolites after isoproterenol in Syrian cardiomyopathic hamsters. Circulation. 1988 Mar; 77(3):712-9. Camacho SA, Wikman-Coffelt J, Wu ST, Watters TA, Botvinick EH, Sievers R, James TL, Jasmin G, Parmley WW. PMID: 3342496.
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    211. Substrate regulation of the nucleotide pool during regional ischaemia and reperfusion in an isolated rat heart preparation: a phosphorus-31 magnetic resonance spectroscopy analysis. Cardiovasc Res. 1988 Mar; 22(3):193-203. Camacho SA, Parmley WW, James TL, Abe H, Wu ST, Botvinick EH, Watters TA, Schiller N, Sievers R, Wikman-Coffelt J. PMID: 3167943.
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    212. Beneficial effects of verapamil during metabolic acidosis in isolated perfused rat hearts. Cardiovasc Drugs Ther. 1988 Jan; 1(5):493-502. Markiewicz W, Wu SS, Sievers R, Parmley WW, Watters TA, James TL, Higgins CB, Wikman-Coffelt J. PMID: 3154678.
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    213. The effects of hypovolemic hypotension on high-energy phosphate metabolism of traumatized brain in rats. J Neurosurg. 1988 Jan; 68(1):129-36. Ishige N, Pitts LH, Berry I, Nishimura MC, James TL. PMID: 3335898.
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    214. NMR Spectroscopy and Drug Development. 1988; 358-379. James TL, Borgias BM, Bianucci AM, Jamin N, Pattabiraman N, Suzuki E-I, Zhou N, Zon G. Molecular Structure Determination via Complete Relaxation Matrix Analysis of 2D NOE Spectra and Molecular Mechanics: Application to DNA Fragments.
    215. 31P NMR of "In Vivo" Insulted Rat Brain. Physica Medica. 1988; 1:13-21. Pogliani L, T.L. James TL, Laschi LH, N. Ishige N, Pitts LH.
    216. In Advances in Surgery for Cerebral Stroke. Edited by J. Suzuki. Tokyo: Springer-Verlag. 1988; 633-637. Shirane R, Chang L-H, Weinstein PR, James TL. Sequential Changes of Brain Metabolism during Temporary Global Ischemia in the Rat Detected by Simultaneous 1H and 31P NMR Spectroscopy.
    217. COMATOSE: A Method for Constrained Refinement of Macromolecular Structure Based on Two-Dimensional Nuclear Overhauser Effect Spectra. J Magn Reson. 1988; 79:493-512. Borgias BA, James TL.
    218. The Modulation Theorem in Tailored Radiofrequency Excitation: Application to a Notch Filter. J Magn Reson. 1988; 78:308-313. Gonzalez-Mendez R, Engeseth H, Gibson AAB, de Olivares J, Litt L, James TL .
    219. Solution structure of [d(GGTATACC)]2: wrinkled D structure of the TATA moiety. Biochemistry. 1987 Dec 01; 26(24):7905-13. Zhou N, Bianucci AM, Pattabiraman N, James TL. PMID: 3427113.
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    220. Factors influencing myocardial response to metabolic acidosis in isolated rat hearts. Am J Physiol. 1987 Nov; 253(5 Pt 2):H1261-70. Watters TA, Wendland MF, Parmley WW, James TL, Botvinick EH, Wu ST, Sievers R, Wikman-Coffelt J. PMID: 3688265.
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    221. Measurement of lactate accumulation by in vivo proton NMR spectroscopy during global cerebral ischemia in rats. Magn Reson Med. 1987 Oct; 5(4):353-7. Richards TL, Keniry MA, Weinstein PR, Pereira BM, Andrews BT, Murphy EJ, James TL. PMID: 3683164.
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    222. An in vivo 19F nuclear magnetic resonance study of isoflurane elimination from the rabbit brain. Anesthesiology. 1987 Aug; 67(2):169-73. Mills P, Sessler DI, Moseley M, Chew W, Pereira B, James TL, Litt L. PMID: 3605743.
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    223. An in vivo study of halothane uptake and elimination in the rat brain with fluorine nuclear magnetic resonance spectroscopy. Anesthesiology. 1987 Aug; 67(2):161-8. Litt L, González-Méndez R, James TL, Sessler DI, Mills P, Chew W, Moseley M, Pereira B, Severinghaus JW, Hamilton WK. PMID: 3605742.
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    224. Influence of heart rate on metabolic and hemodynamic parameters in the Syrian hamster cardiomyopathy. Am Heart J. 1987 Aug; 114(2):362-8. Markiewicz W, Wu S, Sievers R, Parmley WW, Higgins CB, James TL, Jasmin G, Wikman-Coffelt J. PMID: 3604893.
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    225. Effect of hypoxia on traumatic brain injury in rats: Part 2. Changes in high energy phosphate metabolism. Neurosurgery. 1987 Jun; 20(6):854-8. Ishige N, Pitts LH, Pogliani L, Hashimoto T, Nishimura MC, Bartkowski HM, James TL. PMID: 3614564.
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    226. Comparison of lactate concentration determinations in ischemic and hypoxic rat brains by in vivo and in vitro 1H NMR spectroscopy. Magn Reson Med. 1987 Jun; 4(6):575-81. Chang LH, Pereira BM, Weinstein PR, Keniry MA, Murphy-Boesch J, Litt L, James TL. PMID: 3613957.
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    227. The preventive effect of verapamil on ethanol-induced cardiac depression: phosphorus-31 nuclear magnetic resonance and high-pressure liquid chromatographic studies of hamsters. Circulation. 1987 May; 75(5):1058-64. Wu S, White R, Wikman-Coffelt J, Sievers R, Wendland M, Garrett J, Higgins CB, James T, Parmley WW. PMID: 3568306.
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    228. In situ brain metabolism. Ann N Y Acad Sci. 1987; 508:64-80. James TL, Chang LH, Chew W, Gonzalez-Mendez R, Litt L, Mills P, Moseley M, Pereira B, Sessler DI, Weinstein PR. PMID: 3439713.
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    229. Spin-echo fluorine magnetic resonance imaging at 2 T: in vivo spatial distribution of halothane in the rabbit head. Magn Reson Imaging. 1987; 5(1):51-6. Chew WM, Moseley ME, Mills PA, Sessler D, González-Méndez R, James TL, Litt L. PMID: 3586872.
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    230. Assessment of clinical renal preservation by phosphorus-31 magnetic resonance spectroscopy. J Urol. 1987 Jan; 137(1):146-50. Bretan PN, Vigneron DB, Hricak H, Collins GM, Price DC, Tanagho EA, James TL. PMID: 3540322.
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    231. 31P magnetic resonance spectroscopy of mesenteric ischemia. Magn Reson Med. 1987 Jan; 4(1):83-7. Kass DA, Banville DL, Gooding CA, James TL. PMID: 3821482.
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    232. Principles of Magnetic Resonance Spectroscopy. Appl Radiol. 1987; 16:40-52. James TL, Chew WM, Giannini DD, Gonzalez-Mendez R, Moseley ME, Pogliani L, Vigneron D .
    233. The Swift Method for In Vivo Localized Excitation (SMILE). J Magn Reson. 1987; 75:523-528. Chew WM, Chang L-H, Flamig DP, James TL.
    234. 1987; 107-113. Moseley ME, Chew WM, Brant-Zawadzki M, James TL. Magnetic Resonance Spectroscopy: Principles and Potential Applications. In Magnetic Resonance in the Central Nervous System. Edited by M. Brant-Zawadzki and D. Norman. New York: Raven Press.
    235. 1987; 64-80. James TL, Chang L-H, W. Chew W, Gonzalez-Mendez R, Litt L, Mills P, Moseley M, Pereira B, Sessler DI, Weinstein PR. In Situ Brain Metabolism. In Physiological NMR Spectroscopy: From Isolated Cells to Man, Edited by S.M. Cohen. Ann. N.Y. Acad. Sci., Vol 508.
    236. Precision Mapping of the B1 Field Using the Rotating Frame Experiment. J Magn Reson. 1987; 73:293-299. Murphy-Boesch J, So G, James TL.
    237. 31P NMR Results of In Vivo Insulted Rat Brain. A Qualitative Interpretation of the Metabolic Changes. Physica Medica. 1987; 1:35-41. Pogliani L, Valensin G, Pitts LH, Ishige N, James TL.
    238. In Situ Brain Metabolism. Ann NY Acad Sci. 1987; 508:64-80. James TL, Chang L-H, Chew W, Gonzalez-Mendez R, Litt L, Mills P, Moseley M, Pereira B, Sessler DI, Weinstein PR.
    239. A Balance-Matched Double-Tuned Probe for In Vivo 1H and 31P NMR. J Magn Reson. 1987; 72:168-172. Chang L-H, Chew WM, Weinstein PR, James TL.
    240. Evaluation of the Hereditary Syrian Hamster Cardiomyopathy by 31P Nuclear Magnetic Resonance Spectroscopy: Improvement After Acute Verapamil Therapy. Circulation Research. 1987; 59:597-604. Markiewicz W, Wu SS, Parmley WW, Higgins CB, Sievers R, James TL, Wikman-Coffelt J, Jasmin G.
    241. 1987; 503-514. James TL, Suzuki E-I, N. Pattabiraman N, Zon G. Detailed Structure Determination of DNA Fragments Using Complete Relaxation Matrix Analysis of Two-Dimensional NMR Spectra, Molecular Mechanics Calculations and Computer Graphics. In Biophosphates and Their Analogues. Synthesis, Metabolism, and Activity. Edited by K.S. Bruzik and W.J. Stec. Amsterdam: Elsevier Science, .
    242. Binding of [1-13C]galactose-enriched hen ovalbumin to Erythrina cristagalli agglutinin as studied by 13C-NMR spectroscopy. Eur J Biochem. 1986 Dec 15; 161(3):589-94. Berman E, Lis H, James TL. PMID: 3792309.
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    243. Evaluation of the hereditary Syrian hamster cardiomyopathy by 31P nuclear magnetic resonance spectroscopy: improvement after acute verapamil therapy. Circ Res. 1986 Dec; 59(6):597-604. Markiewicz W, Wu SS, Parmley WW, Higgins CB, Sievers R, James TL, Wikman-Coffelt J, Jasmin G. PMID: 3815756.
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    244. Localized tissue MR spectroscopy. AJR Am J Roentgenol. 1986 Dec; 147(6):1327-8. Margulis AR, James TL. PMID: 3490773.
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    245. Assessment of renal preservation by phosphorus-31 magnetic resonance spectroscopy: in vivo normothermic blood perfusion. J Urol. 1986 Dec; 136(6):1356-9. Bretan PN, Vigneron DB, Hricak H, Juenemann KP, Williams RD, Tanagho EA, James TL. PMID: 3534322.
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    246. Phosphorothioate-modified oligodeoxyribonucleotides. III. NMR and UV spectroscopic studies of the Rp-Rp, Sp-Sp, and Rp-Sp duplexes, [d(GGSAATTCC)]2, derived from diastereomeric O-ethyl phosphorothioates. Nucleic Acids Res. 1986 Nov 25; 14(22):9081-93. LaPlanche LA, James TL, Powell C, Wilson WD, Uznanski B, Stec WJ, Summers MF, Zon G. PMID: 3786144; PMCID: PMC311930.
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    247. Solution structure of [d(A-T)5]2 via complete relaxation matrix analysis of two-dimensional nuclear Overhauser effect spectra and molecular mechanics calculations: evidence for a hydration tunnel. Biochemistry. 1986 Nov 04; 25(22):6854-65. Suzuki E, Pattabiraman N, Zon G, James TL. PMID: 3801398.
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    248. An in vivo 31P NMR study of cerebral hypoxic hypoxia in rats. Magn Reson Med. 1986 Aug; 3(4):619-25. Litt L, González-Méndez R, Weinstein PR, Severinghaus JW, Hamilton WK, Shuleshko J, Murphy-Boesch J, James TL. PMID: 3747822.
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    249. Cerebral intracellular ADP concentrations during hypercarbia: an in vivo 31P nuclear magnetic resonance study in rats. J Cereb Blood Flow Metab. 1986 Jun; 6(3):389-92. Litt L, González-Méndez R, Severinghaus JW, Hamilton WK, Rampil IJ, Shuleshko J, Murphy-Boesch J, James TL. PMID: 3711164.
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    250. Assessment of renal viability by phosphorus-31 magnetic resonance spectroscopy. J Urol. 1986 Apr; 135(4):866-71. Bretan PN, Vigneron DB, James TL, Williams RD, Hricak H, Juenemann KP, Yen TS, Tanagho EA. PMID: 3514965.
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    251. In vivo 31P-MR spectroscopy of the liver in the infant rabbit to study the effect of hypoxia on the phosphorus metabolites and intracellular pH. Invest Radiol. 1986 Feb; 21(2):156-61. Schmidt HC, Gooding CA, James TL. PMID: 3957589.
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    252. 31P NMR saturation transfer measurements of phosphorus exchange reactions in rat heart and kidney in situ. Biochemistry. 1986 Jan 14; 25(1):77-84. Koretsky AP, Wang S, Klein MP, James TL, Weiner MW. PMID: 3954995.
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    253. Localized Tissue MR Spectroscopy. Am J Roentgenol. 1986; 147:1327-1328. Margulis AR, James TL .
    254. Magnetic Resonance Spectroscopy: Principles and Potential Application. Applied Radiol. 1986; 16:40-52. James TL, Chew WM, Giannini DD, Gonzalez-Mendez R, Moseley ME, Pogliani L, Vigneron D .
    255. 2D NOE Full Relaxation Matrix Analysis and Molecular Mechanics Calculations for Structure Determination in Solution: DNA Fragments. Bull Magn Reson. 1986; 8:152-156. James TL, Suzuki E-I, Pattabiraman N, Zon G.
    256. 1986; 81-108. James TL, Broido MS, Jamin N, Young GB, Zon G. Structure and Dynamics via Two-dimensional NMR. Illustrations with DNA Fragments. In Advanced Magnetic Resonance Techniques in Systems of High Molecular Complexity. Edited by N. Nicolai and G. Valensin. Boston: Birkhauser.
    257. Comparison of in vivo 31P-MR spectra of the brain, liver, and kidney of adult and infant animals. Pediatr Radiol. 1986; 16(2):144-9. Schmidt HC, Gooding CA, James TL, Gonzalez-Mendez R, James JL. PMID: 3951898.
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    258. Technical Obstacles Hinder Spread of MR Spectroscopy. Diagnostic Imaging. 1986; 8:218-221. James TL.
    259. A novel double-surface coil approach to phosphorus-31 spectroscopy: a study of hemispheric brain injury in the rat. Magn Reson Med. 1985 Dec; 2(6):567-75. Chew WM, Moseley ME, Nishimura MC, Hashimoto T, Pitts LH, James TL. PMID: 3880098.
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    260. Detection of exchange reactions involving small metabolite pools using NMR magnetization transfer techniques: relevance to subcellular compartmentation of creatine kinase. Magn Reson Med. 1985 Dec; 2(6):586-94. Koretsky AP, Basus VJ, James TL, Klein MP, Weiner MW. PMID: 3880100.
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    261. Effects of hypoxic hypoxia on cerebral phosphate metabolites and pH in the anesthetized infant rabbit. J Cereb Blood Flow Metab. 1985 Dec; 5(4):512-6. González-Méndez R, McNeill A, Gregory GA, Wall SD, Gooding CA, Litt L, James TL. PMID: 4055924.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    262. Cerebral intracellular changes during supercarbia: an in vivo 31P nuclear magnetic resonance study in rats. J Cereb Blood Flow Metab. 1985 Dec; 5(4):537-44. Litt L, González-Méndez R, Severinghaus JW, Hamilton WK, Shuleshko J, Murphy-Boesch J, James TL. PMID: 4055925.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    263. NMR studies of chromomycin A3 interaction with DNA. Biochemistry. 1985 Nov 19; 24(24):6887-93. Berman E, Brown SC, James TL, Shafer RH. PMID: 2416346.
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    264. Two-dimensional nuclear Overhauser enhancement investigation of the solution structure and dynamics of the DNA octamer [d(GGTATACC)]2. Eur J Biochem. 1985 Oct 01; 152(1):157-66. Jamin N, James TL, Zon G. PMID: 4043076.
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    265. AUR memorial Award. Induced alignment of flowing sickle erythrocytes in a magnetic field. A preliminary report. Invest Radiol. 1985 Sep; 20(6):560-6. Brody AS, Sorette MP, Gooding CA, Listerud J, Clark MR, Mentzer WC, Brasch RC, James TL. PMID: 2933361.
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    266. Interactions of diastereomeric tripeptides of lysyl-5-fluorotryptophyllysine with DNA. 1. Optical and 19F NMR studies of native DNA complexes. Biochemistry. 1985 Jul 30; 24(16):4333-41. Shine NR, James TL. PMID: 4052400.
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    267. Interactions of diastereomeric tripeptides of lysyl-5-fluorotryptophyllysine with DNA. 2. Optical, 19F NMR, and strand cleavage studies of apurinic DNA complexes. Biochemistry. 1985 Jul 30; 24(16):4341-5. Shine NR, Bubienko E, James TL. PMID: 4052401.
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    268. Investigation of the solution structure of a DNA octamer [d(GGAATTCC)]2 using two-dimensional nuclear Overhauser enhancement spectroscopy. Eur J Biochem. 1985 Jul 01; 150(1):117-28. Broido MS, James TL, Zon G, Keepers JW. PMID: 2990923.
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    269. Magnetic resonance imaging: absence of in vitro cytogenetic damage. Radiology. 1985 Apr; 155(1):163-5. Wolff S, James TL, Young GB, Margulis AR, Bodycote J, Afzal V. PMID: 4038809.
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    270. 1985; 553-562. James TL, Young GB, Broido MS, Keepers JW, Jamin N, Zon G. Quantitative Internuclear Distances via 2D NMR Spectra: A Test Case and DNA Octamer Duplex. In Proceedings of the International Symposium on Biomolecular Structure and Interactions. Edited by V. Sasisekharan and K.R.K. Easwaran.
    271. 1985; 33-52. James TL, In Vivo Nuclear Magnetic Resonance Spectroscopy. Article in Workshop on Advances in NASA-Relevant, Minimally Invasive Instrumentation, April 25-27, 1984, Asilomar, California. Pasadena: NASA Jet Propulsion Laboratory.
    272. Selective Inversion with Surface Coils: Use of Depth Pulses for the Inversion Transfer Experiment In Vivo. J Magn Reson. 1985; 65:516-521. Gonzalez-Mendez R, Moseley ME, Murphy-Boesch J, Chew WM, Litt L, James TL .
    273. 1985; 141-148. James TL, Gonzalez-Mendez R, Litt L. Magnetic Resonance Spectroscopy: Principles and Potential Application in Medicine. Chapter in Contemporary Imaging. Edited by H.I. Goldberg, C.B. Higgins, and E.J. Ring. San Francisco: Radiology Research and Education Foundation.
    274. 1985; 1-30. James TL, Phosphorus-31 NMR as a Probe for Phosphoproteins. In CRC Critical Reviews in Biochemistry, Vol. 18, Edited by G.D. Fasman. Boca Raton: CRC Press.
    275. Molecular-mechanical studies of the mismatched base analogs of d(CGCGAATTCGCG)2:d(CGTGAATTCGCG)2, d(CGAGAATTCGCG)2, d(CGCGAATTCACG)2, d(CGCGAATTCTCG)2, and d(CGCAGAATTCGCG).d(CGCGAATTCGCG). Biopolymers. 1984 Dec; 23(12):2901-29. Keepers JW, Schmidt P, James TL, Kollman PA. PMID: 6525406.
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    276. Molecular mechanical studies of base-pair opening in d(CGCGC):d(GCGCG), dG5 . dC5, d(TATAT):d(ATATA), and dA5 . dT5 in the B and Z forms of DNA. Biopolymers. 1984 Nov; 23(11 Pt 2):2499-511. Keepers J, Kollman PA, James TL. PMID: 6518264.
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    277. Methyl motions in 13C-methylated concanavalin as studied by 13C magnetic resonance relaxation techniques. Biochemistry. 1984 Jul 03; 23(14):3181-5. Sherry AD, Keepers J, James TL, Teherani J. PMID: 6432038.
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    278. In vivo 19F-NMR of 5-fluorouracil incorporation into RNA and metabolites in Escherichia coli cells. Biochim Biophys Acta. 1984 May 22; 804(1):118-24. Gochin M, James TL, Shafer RH. PMID: 6202324.
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    279. Complete assignment of the non-exchangeable proton nmr resonances of [d-(GGAATTCC)]2 using two-dimensional nuclear overhauser effect spectra. Biochem Biophys Res Commun. 1984 Mar 15; 119(2):663-70. Broido MS, Zon G, James TL. PMID: 6712651.
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    280. Proton nuclear magnetic resonance spectroscopy of normal and edematous brain tissue in vitro: changes in relaxation during tissue storage. Magn Reson Imaging. 1984; 2(3):205-9. Moseley ME, Nishimura MC, Pitts LH, Bartkowski HM, James TL. PMID: 6530927.
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    281. Determination of Molecular Structure in Solution via Two-Dimensional Nuclear Overhauser Effect Experiments: Proflavine as a Rigid Molecule Test Case. J Amer Chem Soc. 1984; 106:7986-7988. Young GB, James TL.
    282. Proton Nuclear Magnetic Resonance Spectroscopy of Normal and Edematous Brain Tissue In Vitro: Changes in Relaxation during Tissue Storage. Magn Reson Imaging. 1984; 2:205-209. Moseley ME, Nishimura MC, Pitts LH, Bartkowski HM, James TL .
    283. Comparison of 31P NMR Spectra of In Vivo Rat Brain Using Convolution Difference and Saturation with a Surface Coil. Source of the Broad Component in the Brain Spectrum. J Magn Reson. 1984; 57:526-533. Gonzales-Mendez R, Litt L, Koretsky AP, von Colditz J, Weiner MW, James TL.
    284. 1984; 1-6. James TL, Margulis AR. Historical Development of Biomedical Magnetic Resonance. Chapter 1 in Biomedical Magnetic Resonance, Edited by T.L. James and A.R. Margulis. San Francisco: Radiology Research and Education Foundation.
    285. 1984; 235-244. James TL, In Vivo Nuclear Magnetic Resonance Spectroscopy. Chapter in NMR, CT, and Interventional Radiology. Edited by A.A. Moss, E.J. Ring, and C.B. Higgins. San Francisco: Radiology Education and Research Foundation.
    286. 1984; 7-22. James TL, Basic Nuclear Magnetic Resonance Principles. Chapter 2 in Biomedical Magnetic Resonance. Edited by T.L. James and A.R. Margulis. San Francisco: Radiology Research and Education Foundation.
    287. 1984; 349-400. James TL. Relaxation Behavior of Nucleic Acids. Dynamics and Structure. Chapter 12 in Phosphorus-31 NMR. Principles and Applications, Edited by D. Gorenstein. New York: Academic Press.
    288. Biomedical Magnetic Resonance, San Francisco: Radiology Research and Education Foundation. 1984; 1-462. James TL, Margulis AR (Editors).
    289. A Theoretical Study of Distance Determinations from NMR. Two-Dimensional Nuclear Overhauser Effect Spectra. J Magn Reson. 1984; 57:404-426. Keepers JW, James TL.
    290. 1984; 267-271. Moseley ME, Chew WM, James TL. Sodium-23 Magnetic Resonance Imaging. Chapter 18 in Biomedical Magnetic Resonance. Edited by T.L. James and A.R. Margulis. San Francisco: Radiology Research and Education Foundation.
    291. 31P NMR spectroscopy of rat organs, in situ, using chronically implanted radiofrequency coils. Proc Natl Acad Sci U S A. 1983 Dec; 80(24):7491-5. Koretsky AP, Wang S, Murphy-Boesch J, Klein MP, James TL, Weiner MW. PMID: 6584867; PMCID: PMC389977.
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    292. Energy levels at systole vs. diastole in normal hamster hearts vs. myopathic hamster hearts. Circ Res. 1983 Dec; 53(6):759-66. Sievers R, Parmley WW, James T, Wikman-Coffelt J. PMID: 6640862.
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    293. Deuterium NMR in the solid-state and in solution of the molecular motion of the bases in poly(I) and poly(I) . poly(C). Biochim Biophys Acta. 1983 Sep 13; 759(3):205-13. Bendel P, Murphy-Boesch J, James TL. PMID: 6882799.
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    294. Physicochemical characterization of large unilamellar phospholipid vesicles prepared by reverse-phase evaporation. Biochim Biophys Acta. 1983 Jul 13; 732(1):289-99. Düzgünes N, Wilschut J, Hong K, Fraley R, Perry C, Friend DS, James TL, Papahadjopoulos D. PMID: 6688185.
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    295. Structural and dynamic differences between supercoiled and linear DNA from proton NMR. Proc Natl Acad Sci U S A. 1983 Jun; 80(11):3284-6. Bendel P, James TL. PMID: 6574485; PMCID: PMC394025.
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    296. 13C-n.m.r.-spectral study of galactosyltransferase specificity with regard to the carbohydrate side-chain of native ovalbumin. Carbohydr Res. 1983 Feb 16; 113(1):141-50. Berman E, James TL. PMID: 6404553.
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    297. 1983; 41-51. James TL. Basic Principles and Biological Research Applications. Chapter 5 in Clinical Magnetic Resonance Imaging. Edited by A.R. Margulis, C.B. Higgins, L. Kaufman, and L.E. Crooks. San Francisco: Radiology Research and Education Foundation.
    298. The Dynamic Structure of Nucleic Acids. Bull Magn Reson. 1983; 5:165-167. James TL, Bendel P, Keepers JW, Taylor JE .
    299. 1983; 42-48. Koretsky A, Straus W, Basus V, Murphy J, Bendel P, James T, Weiner M. Feasibility of 31P NMR to Study Metabolic Effects of Renal Ischemia In Vivo. Proceedings of the Eighth International Congress on Nephrology, Satellite Symposium on Acute Renal Failure, Edited by H.E. Eliahu. New York: Saunders.
    300. 1983; 155-167. James TL, Bendel P, James JL, Keepers JW, Kollman PA, Lapidot A, Murphy-Boesch J, Taylor JE. Conformational Flexibility of Nucleic Acids. Chapter in Nucleic Acids: The Vectors of Life, . Edited by B. Pullman and J. Jortner. D. Reidel.
    301. Conformational Flexibility in Nucleic Acids Investigated by NMR Relaxation. Bull Magn Reson. 1983; 4:119-159. James TL .
    302. NMR of Nucleic Acids. Magn Reson Rev. 1983; 8:139-163. James TL, Schmidt PG.
    303. 13P NMR Spectroscopy of Rat Organs, In Situ, Using Chronically Implanted Radiofrequency Coils. Proc Nat Acad Sci. 1983; 80:7491-7495. Koretsky AP, Wang S, Murphy-Boesch J, Klein MP, James TL, Weiner MW.
    304. Comparison of ribonucleic acid-protein interactions in messenger ribonucleoproteins, ribosomes, MS2 virus, and Q beta virus examined via phosphorus-31 nuclear magnetic resonance relaxation. Biochemistry. 1982 Nov 23; 21(24):6073-81. Bolton PH, Clawson G, Basus VJ, James TL. PMID: 7150544.
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    305. Molecular mechanical studies of DNA flexibility: coupled backbone torsion angles and base-pair openings. Proc Natl Acad Sci U S A. 1982 Sep; 79(18):5537-41. Keepers JW, Kollman PA, Weiner PK, James TL. PMID: 6957879; PMCID: PMC346939.
      View in: PubMed   Mentions: 15     Fields:    Translation:Cells
    306. Fluoroquinacrine binding to nucleic acids: investigation of the 19F-NMR, optical, and fluorescence properties in the presence of DNA, poly(A), and tRNA. Biopolymers. 1982 May; 21(5):909-21. Mirau PA, Shafer RH, James TL, Bolton PH. PMID: 7082769.
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    307. An NMR study of 13C-enriched galactose attached to the single carbohydrate chain of hen ovalbumin. Motions of the carbohydrates of glycoproteins. J Biol Chem. 1982 Feb 25; 257(4):1829-35. Goux WJ, Perry C, James TL. PMID: 7056747.
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    308. Binding of 5-fluorotryptamine to polynucleotides as a model for protein-nucleic acid interactions: fluorine-19 nuclear magnetic resonance, absorption, and fluorescence studies. Biochemistry. 1982 Feb 16; 21(4):615-20. Mirau PA, Shafer RH, James TL. PMID: 7074027.
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    309. Transverse Relaxation of 31P in 5'-AMP. J Magn Reson. 1982; 48:76-85. Bendel P, James TL.
    310. Molecular Motions of Supercoiled and Circular-DNA. A Phosphorus-31 Nuclear Magnetic Resonance Study. J Am Chem Soc. 1982; 104:6748-6753. Bendel P, Laub O, James TL .
    311. Models for DNA Backbone Motions: An Interpretation of NMR Relaxation Experiments. J Amer Chem Soc. 1982; 104:929-939. Keepers JW, James TL.
    312. 1982; 111-118. Edmondson DE, James TL. Physical and Chemical Studies on the FMN and Non-Flavin Phosphate Residues in Azotobacter Flavodoxin. Chapter 20 in Flavins and Flavoproteins, Edited by V. Massey and C.H. Williams. Amsterdam: Elsevier North Holland, Inc.
    313. Glucose oxidase contains a disubstituted phosphorus residue. Phosphorus-31 nuclear magnetic resonance studies of the flavin and nonflavin phosphate residues. Biochemistry. 1981 Feb 03; 20(3):617-21. James TL, Edmondson DE, Husain M. PMID: 7213598.
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    314. An NMR study of the interaction of daunomycin with dinucleotides and dinucleoside phosphates. Biochim Biophys Acta. 1980 Aug 26; 609(1):136-47. Nuss ME, James TL, Apple MA, Kollman PA. PMID: 7407180.
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    315. Conformational mobility of deoxyribonucleic acid, transfer ribonucleic acid, and poly(adenylic acid) as monitored by carbon-13 nuclear magnetic resonance relaxation. Biochemistry. 1980 Apr 01; 19(7):1388-92. Bolton PH, James TL. PMID: 7387998.
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    316. CNS depression from intrathecal morphine. Anesthesiology. 1980 Mar; 52(3):280. Davies GK, Tolhurst-Cleaver CL, James TL. PMID: 6892756.
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    317. Internal Motions in Proteins Examined by 13C NMR Rotating Frame Spin-Lattice Relaxation: Chymotrypsinogen. J Magn Reson. 1980; 39:141-153. James TL.
    318. Fast and Slow Conformational Fluctuations of RNA and DNA. Subnanosecond Internal Motion Correlation Times Determined by 31P NMR. J Am Chem Soc. 1980; 102(1):25-31. Bolton PH, James TL.
    319. Spectral studies on the interaction of dichloromethane with hemoglobin. Mol Pharmacol. 1979 Nov; 16(3):1065-74. Harkey MR, Settle WL, James TL, Trevor AJ. PMID: 530249.
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    320. Covalently bound non-coenzyme phosphorus residues in flavoproteins: 31P nuclear magnetic resonance studies of Azotobacter flavodoxin. Proc Natl Acad Sci U S A. 1979 Aug; 76(8):3786-9. Edmondson DE, James TL. PMID: 291038; PMCID: PMC383919.
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    321. Molecular Motions in RNA and DNA Investigated by Phosphorus-31 and Carbon-13 NMR Relaxation. J Phys Chem. 1979; 83(26):3359-3366. Bolton PH, James TL.
    322. Line Narrowing Induced by Selective Population Transfer. J Magn Reson. 1979; 36:443-446. Bolton PH, James TL.
    323. Rotating Frame Spin-Lattice Relaxation in the Presence of an Off-Resonance Radiofrequency Field. Scalar Relaxation of 31P in PBr3. J Magn Reson. 1979; 33:345-353. James TL, Matson GB.
    324. Proton NMR Assignments for Cholesterol. Use of Deuterium NMR as an Assignment Aid. J Magn Reson. 1979; 35:409-414. Sawan SP, James TL, Gruenke LD, Craig JC.
    325. Unfolding of Ribonuclease A by Guanidinium Chloride. Protein Internal Motions Studied by Nuclear Magnetic Resonance Spin-Lattice Relaxation in an Off-Resonance Rotating Frame. J Am Chem Soc. 1979; 101(23):7050-7055. James TL, Sawan SP.
    326. Chapter 14 in NMR and Biochemistry. A Symposium Honoring Mildred Cohn. Edited by SJ Opella and P Lu. 1979; 211-223. James TL. Study of Protein Mobility Using Rotating Frame Spin-Lattice Relaxation in the Presence of an Off-Resonance rf Field.
    327. Effect of dichloromethane on sickle cells. An in vitro water proton magnetic resonance relaxation study. Biochem Biophys Res Commun. 1978 Feb 28; 80(4):879-85. Matthews RM, James TL. PMID: 637872.
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    328. Protein Rotational Correlation Times Determined in Aqueous Solution by Carbon-13 Rotating Frame Spin-Lattice Relaxation in the Presence of an Off-Resonance Radiofrequency Field. J Am Chem Soc. 1978; 11(100): 3590-3594. James TL, Matson GB, Kuntz ID.
    329. Use of a Plastic Tube Insert for NMR Experiments Entailing Hazardous Samples. J Magn Reson. 1978; 32:173-174. Sawan SP, James TL.
    330. Hemoglobin-water interactions in normal and sickle erythrocytes by proton magnetic resonance T1p measurements. Arch Biochem Biophys. 1977 Jan 30; 178(2):435-41. Zipp A, Kuntz ID, James TL. PMID: 836043.
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    331. Rotating Frame Spin-Lattice Relaxation in the Presence of an Off-Resonance Radiofrequency Field. Investigation of Intermediate Molecular Motion. J Magn Reson. 1977; 28:417-426. James TL, Matson GB, Kuntz ID, Fisher RW, Buttlaire DH .
    332. Binding of adenosine 5'-diphosphate to creatine kinase. An investigation using intermolecular nuclear Overhauser effect measurements. Biochemistry. 1976 Oct 19; 15(21):4724-30. James TL. PMID: 974086.
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    333. Water proton magnetic resonance studies of normal and sickle erythrocytes. Temperature and volume dependence. Biochim Biophys Acta. 1976 Apr 23; 428(2):291-303. Zipp A, James TL, Kuntz ID, Shohet SB. PMID: 1276160.
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    334. An Investigation of "Bound" Water in Frozen Erythrocytes by Proton Magnetic Resonance Spin-Lattice, Spin-Spin, and Rotating Frame Spin-Lattice Relaxation Time Measurements. J Magn Reson. 1976; 24:411-424. Zipp A, Kuntz ID, James TL.
    335. ACS Symposium Series. Biochemistry Involving Carbon-Fluorine Bonds. 1976; 57-76. Santi DV, Pogolotti AL, James TL, Wataya Y, Ivanetich KM, Lam SSM. Thymidylate Synthetase: Interaction with 5-Fluoro and 5-Trifluoromethyl-2'-Deoxyuridylic Acid.
    336. ACS Symposium Series. Magnetic Resonance in Colloid and Interface Science. 1976; 499-503. Kuntz ID, Zipp A, James TL. Motions of Water in Biological Systems. Chapter 40 in Magnetic Resonance in Colloid and Interface Science, pp. 499-503. ACS Symposium Series, Number 34. Edited by H.A. Resing and C.G. Wade. American Chemical Society, 1976.
    337. Outpatient phenothiazine use and bone marrow depression. A report from the drug epidemiology unit and the Boston collaborative drug surveillance program. Arch Gen Psychiatry. 1975 Nov; 32(11):1416-8. Swett C. PMID: 978.
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    338. The effect of adrenaline and of alpha- and beta-adrenergic blocking agents on ATP concentration and on incorporation of 32Pi into ATP in rat fat cells. Biochem Pharmacol. 1975 Sep 15; 24(18):1659-62. Stein JM. PMID: 12.
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    339. Action of propranolol on mitochondrial functions--effects on energized ion fluxes in the presence of valinomycin. Biochem Pharmacol. 1975 Sep 15; 24(18):1701-5. Järvisalo J, Saris NE. PMID: 13.
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    340. Formate assay in body fluids: application in methanol poisoning. Biochem Med. 1975 Jun; 13(2):117-26. Makar AB, McMartin KE, Palese M, Tephly TR. PMID: 1.
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    341. Nuclear Magnetic Resonance in Biochemistry. 1975; 413 pages. James TL.
    342. Structural aspects of manganese-pyruvate kinase substrate and inhibitor complexes deduced from proton magnetic relaxation rates of pyruvate and a phosphoenolpyruvate analog. J Biol Chem. 1974 Jun 10; 249(11):3519-26. James TL, Cohn M. PMID: 4831226.
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    343. Studies on the characterization of the sodium-potassium transport adenosinetriphosphatase. Nuclear magnetic resonance studies of 23Na binding to the purified and partially purified enzyme. Arch Biochem Biophys. 1974 Jun; 162(2):421-5. Ostroy F, James TL, Noggle JH, Sarrif A, Hokin LE. PMID: 4276201.
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    344. The role of the lysyl residue at the active site of creatine kinase. Nuclear Overhauser effect studies. J Biol Chem. 1974 Apr 25; 249(8):2599-604. James TL, Cohn M. PMID: 4856652.
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    345. Nuclear magnetic resonance study of the binding of phosphoenolpyruvate and phosphoenol-alpha-ketobutyrate to manganese pyruvate kinase. Temperature, frequency,and monovalent cation dependence of water proton nuclear magnetic resonance relaxation rates. J Biol Chem. 1973 Sep 25; 248(18):6443-9. James TL, Reuben J, Cohn M. PMID: 4730326.
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    346. Measurement of the Self-Diffusion Coefficient of Each Component in a Complex System Using Pulsed-Gradient Fourier Transform NMR. J Magn Reson. 1973; 11:58-61. James TL, McDonald GG.
    347. Nuclear magnetic resonance relaxation time and self-diffusion constant of water in hen egg white and yolk. Biochim Biophys Acta. 1972 Nov 24; 286(1):10-5. James TL, Gillen KT. PMID: 4676548.
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    348. 23 Na NMR studies of sodium ion interactions: phosphatidyl serine, phosphoserine, and phosphoethanolamine. Anal Biochem. 1972 Sep; 49(1):208-17. James TL, Noggle JH. PMID: 5081100.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    349. 23Na NMR Studies of Sodium Ion Interactions: Cysteine, Aspartic Acid, and Citric Acid. Bioinorg Chem. 1972; 2:69-74. James TL, Noggle JH .
    350. Pulsed Nuclear Magnetic Resonance Measurement of Relaxation Times in Ion-Exchange Resins. Anal Chem. 1972; 44(6):982-985. Blaedel WJ, Brower LE, James TL, Noggle JH.
    351. Photoelectron Spectroscopy. J Chem Educ. 1971; 48(11):712-718. James TL.
    352. 23Na nuclear magnetic resonance relaxation studies of sodium ion interaction with soluble RNA. Proc Natl Acad Sci U S A. 1969 Mar; 62(3):644-9. James TL, Noggle JH. PMID: 5256995; PMCID: PMC223645.
      View in: PubMed   Mentions: 10     Fields:    
    353. A Comparison of the Proton Affinities of Neutral Oxygen and Sulfur in Chelating Ligands. J Phys Chem. 1969; 73(3):634-640. James TL, Kula RJ.
    354. Sodium-23 Nuclear Magnetic Resonance Studies of Sodium Aminocarboxylic Acid Complexes. J Am Chem Soc. 1969; 91(13):3424-2428. James TL, Noggle JH.
    355. Nuclear Magnetic Resonance Studies of Sodium Aminocarboxylic Acid Complexes. PhD Dissertation, University of Wisconsin, Madison. 1969. James TL.
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