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Yuriy Kirichok, PhD

Title(s)Professor, Physiology
SchoolSchool of Medicine
Address600 16th Street
San Francisco CA 94158
Phone415-476-6734
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    Research Description

    Mitochondria are ubiquitous intracellular organelles responsible for diverse cellular processes including ATP production, intracellular Ca2+ signaling, aging, and programmed cell death. Given the paramount significance of mitochondria in cell physiology, it is not surprising that they have also emerged as key contributors to many pathological conditions, including diabetes, obesity and neurodegenerative diseases. However, development of effective treatment for these disorders has been hampered by our insufficient understanding of the molecular workings of the mitochondrion and how they can contribute to disease.

    Electrical potential across the inner mitochondrial membrane (IMM) generated by mitochondrial respiration is fundamental to all physiological and pathophysiological roles of mitochondria, from producing ATP to triggering cell death. Several types of mitochondrial ion channels that mediate fast ion transport across the IMM control this membrane potential and thus directly affect all aspects of mitochondrial function. Ion channels are gated by various intracellular and extracellular cues that act either directly upon the channels or indirectly via associated membrane receptors. Therefore, the ion channels of the IMM are likely to be a major avenue for control of mitochondrial functions by the cell or the entire organism. However, due to the lack of direct functional assays, mitochondrial channels and signaling pathways that affect their activity remain almost completely unexplored.

    Recently, we overcame this long-standing technical problem by demonstrating that the patch-clamp technique can be reproducibly applied to the IMM in its entirety. In our lab, we combine this powerful biophysical method with genetics and molecular biology for the comprehensive study of the mitochondrial ion channels and mechanisms of their regulation. Results from this work will uncover the fundamental physiological mechanisms that control mitochondrial functions. In the process, the work will identify mechanisms that can contribute to disease and will suggest effective therapeutic interventions based on manipulating mitochondrial ion channels.

    Current Projects

    Electrophysiological and molecular characterization of the mitochondrial Ca2+ uniporter (MCU) and mechanisms of its regulation.
    The MCU is a highly selective Ca2+ channel of the inner mitochondrial membrane responsible for mitochondrial Ca2+ accumulation during intracellular Ca2+ signaling. It is important for regulating the rate of mitochondrial ATP production, shaping intracellular Ca2+ signals, and initiating both necrotic and apoptotic cell death. The MCU also has been implicated in regulation of ROS production by mitochondria and thus likely plays an important role in aging and neurodegenerative diseases. Unfortunately molecular identity of this important channel and its mechanisms of regulation remain unknown. We hope to solve this problem and learn more about physiological and pathophysiological roles of the MCU.

    Comprehensive identification and electrophysiological characterization of mitochondrial ion channels using single-channel and whole-membrane patch clamp recordings from the native inner mitochondrial membrane.

    In addition to the MCU, the inner mitochondrial membrane contains proton, potassium and chloride channels as well as a large non-selective pore called the permeability transition pore (PTP). These ion channels, mechanisms of their regulation and their physiological functions remain largely unexplored. We plan to establish the full complement of ion channels located in IMM and prepare basis for their molecular characterization. These results will help us better understand physiological and pathophysiological roles of electrical signaling in mitochondria.

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    Collapse Research Activities and Funding
    Molecular Biophysics of Mitochondrial Membranes
    NIH/NIGMS R35GM136415May 1, 2020 - Apr 30, 2025
    Role: Principal Investigator
    Molecular Mechanisms of Mitochondrial Calcium Uptake
    NIH/NIGMS R01GM134536Sep 1, 2019 - Jun 30, 2023
    Role: Principal Investigator
    Molecular Mechanisms of Mitochondrial Uncoupling and Thermogenesis
    NIH/NIGMS R01GM118939Mar 1, 2017 - Dec 31, 2020
    Role: Principal Investigator
    Mitochondrial Uncoupling and Thermogenesis in Adipose Tissues
    NIH/NIGMS R01GM107710Sep 8, 2015 - Jun 30, 2019
    Role: Principal Investigator
    Molecular Mechanisms that Control Ca2+ Signaling in Human Spermatozoa
    NIH/NICHD R01HD068914Apr 15, 2011 - Jan 31, 2016
    Role: Principal Investigator
    Molecular Biophysics of Mitochondrial Membranes: Defining Future Therapeutic Targ
    NIH DP2OD004656Sep 30, 2008 - Aug 31, 2013
    Role: Principal Investigator

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    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Patch-Clamp Analysis of the Mitochondrial H+ Leak in Brown and Beige Fat. Front Physiol. 2020; 11:326. Bertholet AM, Kirichok Y. PMID: 32351404.
      View in: PubMed   Mentions:
    2. Synthetic Essentiality of Metabolic Regulator PDHK1 in PTEN-Deficient Cells and Cancers. Cell Rep. 2019 08 27; 28(9):2317-2330.e8. Chatterjee N, Pazarentzos E, Mayekar MK, Gui P, Allegakoen DV, Hrustanovic G, Olivas V, Lin L, Verschueren E, Johnson JR, Hofree M, Yan JJ, Newton BW, Dollen JV, Earnshaw CH, Flanagan J, Chan E, Asthana S, Ideker T, Wu W, Suzuki J, Barad BA, Kirichok Y, Fraser JS, Weiss WA, Krogan NJ, Tulpule A, Sabnis AJ, Bivona TG. PMID: 31461649.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    3. H+ transport is an integral function of the mitochondrial ADP/ATP carrier. Nature. 2019 07; 571(7766):515-520. Bertholet AM, Chouchani ET, Kazak L, Angelin A, Fedorenko A, Long JZ, Vidoni S, Garrity R, Cho J, Terada N, Wallace DC, Spiegelman BM, Kirichok Y. PMID: 31341297.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCells
    4. The Mechanism FA-Dependent H+ Transport by UCP1. Handb Exp Pharmacol. 2019; 251:143-159. Bertholet AM, Kirichok Y. PMID: 29797089.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    5. Patch-Clamp Analysis of the Mitochondrial Calcium Uniporter. Methods Mol Biol. 2019; 1925:75-86. Garg V, Kirichok YY. PMID: 30674018.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    6. Perinatal Licensing of Thermogenesis by IL-33 and ST2. Cell. 2017 12 14; 171(7):1707. Odegaard JI, Lee MW, Sogawa Y, Bertholet AM, Locksley RM, Weinberg DE, Kirichok Y, Deo RC, Chawla A. PMID: 29245014.
      View in: PubMed   Mentions:    Fields:    
    7. Mitochondrial Patch Clamp of Beige Adipocytes Reveals UCP1-Positive and UCP1-Negative Cells Both Exhibiting Futile Creatine Cycling. Cell Metab. 2017 Apr 04; 25(4):811-822.e4. Bertholet AM, Kazak L, Chouchani ET, Bogaczynska MG, Paranjpe I, Wainwright GL, Bétourné A, Kajimura S, Spiegelman BM, Kirichok Y. PMID: 28380374.
      View in: PubMed   Mentions: 39     Fields:    Translation:AnimalsCells
    8. UCP1: A transporter for H+ and fatty acid anions. Biochimie. 2017 Mar; 134:28-34. Bertholet AM, Kirichok Y. PMID: 27984203.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
    9. Perinatal Licensing of Thermogenesis by IL-33 and ST2. Cell. 2016 Aug 11; 166(4):841-854. Odegaard JI, Lee MW, Sogawa Y, Bertholet AM, Locksley RM, Weinberg DE, Kirichok Y, Deo RC, Chawla A. PMID: 27453471.
      View in: PubMed   Mentions: 29     Fields:    Translation:AnimalsCells
    10. Keeping a lid on calcium uptake. Elife. 2016 06 03; 5. Garg V, Kirichok Y. PMID: 27258801.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    11. Unconventional endocannabinoid signaling governs sperm activation via the sex hormone progesterone. Science. 2016 Apr 29; 352(6285):555-9. Miller MR, Mannowetz N, Iavarone AT, Safavi R, Gracheva EO, Smith JF, Hill RZ, Bautista DM, Kirichok Y, Lishko PV. PMID: 26989199.
      View in: PubMed   Mentions: 30     Fields:    Translation:HumansAnimalsCells
    12. Signaling the differences between cilia. Elife. 2015 Dec 23; 4. Lishko P, Kirichok Y. PMID: 26697758.
      View in: PubMed   Mentions: 1     Fields:    Translation:Cells
    13. Mitochondrial Ca2+ uniporter and CaMKII in heart. Nature. 2014 Sep 25; 513(7519):E1-2. Fieni F, Johnson DE, Hudmon A, Kirichok Y. PMID: 25254480.
      View in: PubMed   Mentions: 14     Fields:    Translation:AnimalsCells
    14. Mitochondrial uncoupling and thermogenesis. Biochimica et Biophysica Acta (BBA) - Bioenergetics. 2014 Jul 1; 1837:e34. Yuriy Kirichok. .
      View in: Publisher Site   Mentions:
    15. Mitochondrial Uncoupling and Thermogenesis. Biophysical Journal. 2014 Jan 1; 106(2):4a. Yuriy V. Kirichok. .
      View in: Publisher Site   Mentions:
    16. Regulation of CatSper Channel through Non-Conventional Lipid Signaling. Biophysical Journal. 2014 Jan 1; 106(2):434a. Melissa R. Miller, Yuriy Kirichok, Polina Lishko. .
      View in: Publisher Site   Mentions:
    17. Disruption of the principal, progesterone-activated sperm Ca2+ channel in a CatSper2-deficient infertile patient. Proc Natl Acad Sci U S A. 2013 Apr 23; 110(17):6823-8. Smith JF, Syritsyna O, Fellous M, Serres C, Mannowetz N, Kirichok Y, Lishko PV. PMID: 23530196.
      View in: PubMed   Mentions: 42     Fields:    Translation:HumansCells
    18. Sperm patch-clamp. Methods Enzymol. 2013; 525:59-83. Lishko P, Clapham DE, Navarro B, Kirichok Y. PMID: 23522465.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansAnimalsCells
    19. Mechanism of fatty-acid-dependent UCP1 uncoupling in brown fat mitochondria. Cell. 2012 Oct 12; 151(2):400-13. Fedorenko A, Lishko PV, Kirichok Y. PMID: 23063128.
      View in: PubMed   Mentions: 195     Fields:    Translation:AnimalsCells
    20. Activity of the mitochondrial calcium uniporter varies greatly between tissues. Nat Commun. 2012; 3:1317. Fieni F, Lee SB, Jan YN, Kirichok Y. PMID: 23271651.
      View in: PubMed   Mentions: 66     Fields:    Translation:AnimalsCells
    21. Biophysical Properties of UCP1. Biophysical Journal. 2012 Jan 1; 102(3):165a. Andriy Fedorenko, Polina Lishko, Yuriy Kirichok. .
      View in: Publisher Site   Mentions:
    22. Patch-Clamp Analysis of Mitochondrial Ca2+ Uniporter in Different Tissues. Biophysical Journal. 2012 Jan 1; 102(3):437a. Francesca Fieni, Yuriy Kirichok. .
      View in: Publisher Site   Mentions:
    23. Calcium Channel CatSper is a Non-Genomic Progesterone Receptor of Human Sperm. Biophysical Journal. 2012 Jan 1; 102(3):338a. James F. Smith, Yuriy Kirichok, Polina V. Lishko. .
      View in: Publisher Site   Mentions:
    24. The control of male fertility by spermatozoan ion channels. Annu Rev Physiol. 2012; 74:453-75. Lishko PV, Kirichok Y, Ren D, Navarro B, Chung JJ, Clapham DE. PMID: 22017176.
      View in: PubMed   Mentions: 91     Fields:    Translation:HumansAnimalsCells
    25. Rediscovering sperm ion channels with the patch-clamp technique. Mol Hum Reprod. 2011 Aug; 17(8):478-99. Kirichok Y, Lishko PV. PMID: 21642646.
      View in: PubMed   Mentions: 27     Fields:    Translation:HumansAnimalsCells
    26. Progesterone activates the principal Ca2+ channel of human sperm. Nature. 2011 Mar 17; 471(7338):387-91. Lishko PV, Botchkina IL, Kirichok Y. PMID: 21412339.
      View in: PubMed   Mentions: 140     Fields:    Translation:HumansAnimalsCells
    27. The role of Hv1 and CatSper channels in sperm activation. J Physiol. 2010 Dec 01; 588(Pt 23):4667-72. Lishko PV, Kirichok Y. PMID: 20679352.
      View in: PubMed   Mentions: 45     Fields:    Translation:HumansAnimalsCells
    28. Acid extrusion from human spermatozoa is mediated by flagellar voltage-gated proton channel. Cell. 2010 Feb 05; 140(3):327-37. Lishko PV, Botchkina IL, Fedorenko A, Kirichok Y. PMID: 20144758.
      View in: PubMed   Mentions: 110     Fields:    Translation:HumansAnimalsCells
    29. Acid Extrusion from Human Spermatozoa is Mediated by Flagellar Hv1 Proton Channel. Biophysical Journal. 2010 Jan 1; 98(3):708a. Polina V. Lishko, Andriy Fedorenko, Inna L. Botchkina, Yuriy Kirichok. .
      View in: Publisher Site   Mentions:
    30. Hydroxide Ion Channel Controls Uncoupling and Thermogenesis of Brown Fat Mitochondria. Biophysical Journal. 2010 Jan 1; 98(3):379a. Andriy Fedorenko, Polina Lishko, Yuriy Kirichok. .
      View in: Publisher Site   Mentions:
    31. Mammalian Spermatozoa Possess A Voltage-Gated Proton Channel. Biophysical Journal. 2009 Feb 1; 96(3):667a. Polina V. Lishko, Andriy Fedorenko, Yuriy Kirichok. .
      View in: Publisher Site   Mentions:
    32. Electrophysiological Characterization of Mitochondrial Uncoupling Protein 1. Biophysical Journal. 2009 Feb 1; 96(3):537a. Andriy Fedorenko, Polina Lishko, Yuriy Kirichok. .
      View in: Publisher Site   Mentions:
    33. Ion channels that control fertility in mammalian spermatozoa. Int J Dev Biol. 2008; 52(5-6):607-13. Navarro B, Kirichok Y, Chung JJ, Clapham DE. PMID: 18649274.
      View in: PubMed   Mentions: 40     Fields:    Translation:HumansAnimalsCells
    34. KSper, a pH-sensitive K+ current that controls sperm membrane potential. Proc Natl Acad Sci U S A. 2007 May 01; 104(18):7688-92. Navarro B, Kirichok Y, Clapham DE. PMID: 17460039.
      View in: PubMed   Mentions: 68     Fields:    Translation:AnimalsCells
    35. All four CatSper ion channel proteins are required for male fertility and sperm cell hyperactivated motility. Proc Natl Acad Sci U S A. 2007 Jan 23; 104(4):1219-23. Qi H, Moran MM, Navarro B, Chong JA, Krapivinsky G, Krapivinsky L, Kirichok Y, Ramsey IS, Quill TA, Clapham DE. PMID: 17227845.
      View in: PubMed   Mentions: 138     Fields:    Translation:Animals
    36. Whole-cell patch-clamp measurements of spermatozoa reveal an alkaline-activated Ca2+ channel. Nature. 2006 Feb 09; 439(7077):737-40. Kirichok Y, Navarro B, Clapham DE. PMID: 16467839.
      View in: PubMed   Mentions: 121     Fields:    Translation:AnimalsCells
    37. The mitochondrial calcium uniporter is a highly selective ion channel. Nature. 2004 Jan 22; 427(6972):360-4. Kirichok Y, Krapivinsky G, Clapham DE. PMID: 14737170.
      View in: PubMed   Mentions: 413     Fields:    Translation:AnimalsCells
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