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Everlyn Kamau, PhD

Title(s)Postdoctoral Scholar, Proctor Foundation
SchoolChancellor/EVC/FAS
Address95 Kirkham Street
San Francisco CA 94122
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Design considerations for incorporating serological monitoring into trachoma prevalence surveys. medRxiv. 2025 Sep 07. Kamau E, Gass K, Harding-Esch EM, Saboyá Díaz MI, Ante-Testard PA, Kello AB, Bailey RL, Fornace K, Solomon AW, Nash SD, Arnold BF, Global Trachoma Serosurveillance Study Group. PMID: 40950426; PMCID: PMC12424889.
      View in: PubMed   Mentions:
    2. Using Model-Based Geostatistics to Refine Population-Based Estimates of Trachoma Prevalence: Update from a Technical Consultation. Am J Trop Med Hyg. 2025 Jul 31. Harte A, Sasanami M, Burgert-Brucker CR, Bakhtiari A, Bisanzio D, Jimenez C, Solomon AW, Kabona GE, Masika MP, Ngondi J, Ante-Testard PA, Arnold BF, Baayenda G, Cuenca PR, Diggle PJ, Edirweera D, Emerson PM, Fronterre C, Gass K, Newbury L, Hooper PJ, Kamau E, Kebede F, Kyomuhangi I, Lietman TM, McCracken K, Minnery M, Nash SD, Nicholls T, Olobio N, Palmer SL, Saeedzai SA, Somerville S, Stern C, Stukel D, Szwarcwald CL, Talero SL, Yevstigneyeva V, Kello AB, Harding-Esch E, Giorgi E. PMID: 40744002.
      View in: PubMed   Mentions:    Fields:    
    3. The Mathematics of Serocatalytic Models With Applications to Public Health Data. Stat Med. 2025 Jul; 44(15-17):e70188. Kamau E, Chen J, Bajaj S, Torres N, Creswell R, Pavlich-Mariscal JA, Donnelly C, Cucunubá Z, Lambert B. PMID: 40696544; PMCID: PMC12284347.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansPHPublic Health
    4. Characterizing trachoma elimination using serology. Nat Commun. 2025 Jul 01; 16(1):5545. Kamau E, Ante-Testard PA, Gwyn S, Blumberg S, Abdalla Z, Aiemjoy K, Amza A, Aragie S, Arzika AM, Awoussi MS, Bailey RL, Butcher R, Callahan EK, Chaima D, Dawed AA, Díaz MIS, Domingo AS, Drakeley C, Elshafie BE, Emerson PM, Fornace K, Gass K, Goodhew EB, Hammou J, Harding-Esch EM, Hooper PJ, Kadri B, Kalua K, Kanyi S, Kasubi M, Kello AB, Ko R, Lammie PJ, Lescano AG, Maliki R, Masika MP, Migchelsen SJ, Nassirou B, Nesemann JM, Parameswaran N, Pomat W, Renneker KK, Roberts C, Rymil P, Sata E, Senyonjo L, Seife F, Sillah A, Sokana O, Srivathsan A, Tadesse Z, Taleo F, Taylor EM, Tekeraoi R, Togbey K, West SK, Wickens K, William T, Wittberg DM, Yeboah-Manu D, Youbi M, Zeru T, Keenan JD, Lietman TM, Solomon AW, Nash SD, Martin DL, Arnold BF. PMID: 40593530; PMCID: PMC12216694.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCellsPHPublic Health
    5. Enterovirus A71 and coxsackievirus A6 circulation in England, UK, 2006-2017: A mathematical modelling study using cross-sectional seroprevalence data. PLoS Pathog. 2024 Nov; 20(11):e1012703. Kamau E, Lambert B, Allen DJ, Celma C, Beard S, Harvala H, Simmonds P, Grassly NC, Pons-Salort M. PMID: 39565769; PMCID: PMC11578500.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    6. Spatio-temporal distribution of rhinovirus types in Kenya: a retrospective analysis, 2014. Sci Rep. 2024 09 27; 14(1):22298. Morobe JM, Kamau E, Luka MM, Murunga N, Lewa C, Mutunga M, Bigogo G, Otieno N, Nyawanda B, Onyango C, Nokes DJ, Agoti CN, Munywoki PK. PMID: 39333386; PMCID: PMC11436855.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    7. Characterizing trachoma elimination using serology. medRxiv. 2024 Sep 24. Kamau E, Ante-Testard PA, Gwyn S, Blumberg S, Abdalla Z, Aiemjoy K, Amza A, Aragie S, Arzika AM, Awoussi MS, Bailey RL, Butcher R, Callahan EK, Chaima D, Dawed AA, Saboyá Díaz MI, Domingo AS, Drakeley C, Elshafie BE, Emerson PM, Fornace K, Gass K, Goodhew EB, Hammou J, Harding-Esch EM, Hooper PJ, Kadri B, Kalua K, Kanyi S, Kasubi M, Kello AB, Ko R, Lammie PJ, Lescano AG, Maliki R, Masika MP, Migchelsen SJ, Nassirou B, Nesemann JM, Parameswaran N, Pomat W, Renneker K, Roberts C, Rymil P, Sata E, Senyonjo L, Seife F, Sillah A, Sokana O, Srivathsan A, Tadesse Z, Taleo F, Taylor EM, Tekeraoi R, Togbey K, West SK, Wickens K, William T, Wittberg DM, Yeboah-Manu D, Youbi M, Zeru T, Keenan JD, Lietman TM, Solomon AW, Nash SD, Martin DL, Arnold BF. PMID: 39399026; PMCID: PMC11469394.
      View in: PubMed   Mentions:
    8. Assessment of twelve echovirus virus-neutralisation assays in Europe: recommendations for harmonisation of non-polio enterovirus sero-surveillance studies. J Gen Virol. 2024 Sep; 105(9). Couderé K, Benschop KSM, Koen G, van Eijk H, Harvala H, Bailly JL, Bessaud M, Kamau E, Simon I, Joffret ML, Nikolaeva-Glomb L, Georgieva I, Stoyanova A, Diedrich S, Böttcher S, Cabrerizo M, Tabain I, Hruškar Ž, Stevanovic V, Susi P, Hietanen E, Palminha P, Rainetová P, Baicus A, Kristensen M, Pajkrt D, Murk JL, Wolthers KC. PMID: 39311842.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    9. Rhinovirus dynamics across different social structures. Npj Viruses. 2023; 1(1):6. Luka MM, Otieno JR, Kamau E, Morobe JM, Murunga N, Adema I, Nyiro JU, Macharia PM, Bigogo G, Otieno NA, Nyawanda BO, Rabaa MA, Emukule GO, Onyango C, Munywoki PK, Agoti CN, Nokes DJ. PMID: 38665239; PMCID: PMC11041716.
      View in: PubMed   Mentions: 1  
    10. Estimating prevalence of Enterovirus D111 in human and non-human primate populations using cross-sectional serology. J Gen Virol. 2023 11; 104(11). Kamau E, Bessaud M, Majumdar M, Martin J, Simmonds P, Harvala H. PMID: 37910158; PMCID: PMC10768692.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    11. Changes in transmission of Enterovirus D68 (EV-D68) in England inferred from seroprevalence data. Elife. 2023 Jun 09; 12. Pons-Salort M, Lambert B, Kamau E, Pebody R, Harvala H, Simmonds P, Grassly NC. PMID: 37294299; PMCID: PMC10259368.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCellsPHPublic Health
    12. Trends and Intensity of Rhinovirus Invasions in Kilifi, Coastal Kenya, Over a 12-Year Period, 2007-2018. Open Forum Infect Dis. 2021 Dec; 8(12):ofab571. Mwita Morobe J, Kamau E, Murunga N, Gatua W, Luka MM, Lewa C, Cheruiyot R, Mutunga M, Odundo C, James Nokes D, Agoti CN. PMID: 34988244; PMCID: PMC8694214.
      View in: PubMed   Mentions: 3  
    13. Seroprevalence and Virologic Surveillance of Enterovirus 71 and Coxsackievirus A6, United Kingdom, 2006-2017. Emerg Infect Dis. 2021 09; 27(9):2261-2268. Kamau E, Nguyen D, Celma C, Blomqvist S, Horby P, Simmonds P, Harvala H. PMID: 34423767; PMCID: PMC8386771.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansCells
    14. Whole genome sequencing of two human rhinovirus A types (A101 and A15) detected in Kenya, 2016-2018. Wellcome Open Res. 2021; 6:178. Luka MM, Kamau E, de Laurent ZR, Morobe JM, Alii LK, Nokes DJ, Agoti CN. PMID: 34522789; PMCID: PMC8408540.
      View in: PubMed   Mentions: 6  
    15. Comparative analysis of spatial-temporal patterns of human metapneumovirus and respiratory syncytial virus in Africa using genetic data, 2011-2014. Virol J. 2021 05 29; 18(1):104. Oketch JW, Kamau E, Otieno JR, Mwema A, Lewa C, Isoe E, Nokes DJ, Agoti CN. PMID: 34051792; PMCID: PMC8164071.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    16. Enrichment approach for unbiased sequencing of respiratory syncytial virus directly from clinical samples. Wellcome Open Res. 2021; 6:99. Waweru JW, de Laurent Z, Kamau E, Mohammed KS, Gicheru E, Mutunga M, Kibet C, Kinyua J, Nokes DJ, Sande C, Githinji G. PMID: 38779569; PMCID: PMC11109592.
      View in: PubMed   Mentions: 2  
    17. Endemic chikungunya fever in Kenyan children: a prospective cohort study. BMC Infect Dis. 2021 Feb 18; 21(1):186. Nyamwaya DK, Otiende M, Omuoyo DO, Githinji G, Karanja HK, Gitonga JN, R de Laurent Z, Otieno JR, Sang R, Kamau E, Cheruiyot S, Otieno E, Agoti CN, Bejon P, Thumbi SM, Warimwe GM. PMID: 33602147; PMCID: PMC7889702.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansCells
    18. Evolution of respiratory syncytial virus genotype BA in Kilifi, Kenya, 15 years on. Sci Rep. 2020 12 03; 10(1):21176. Kamau E, Otieno JR, Lewa CS, Mwema A, Murunga N, Nokes DJ, Agoti CN. PMID: 33273687; PMCID: PMC7712891.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCellsPHPublic Health
    19. Surveillance of respiratory viruses among children attending a primary school in rural coastal Kenya. Wellcome Open Res. 2020; 5:63. Adema IW, Kamau E, Uchi Nyiro J, Otieno GP, Lewa C, Munywoki PK, Nokes DJ. PMID: 33102784; PMCID: PMC7569485.
      View in: PubMed   Mentions: 7  
    20. Molecular Epidemiology of Human Rhinovirus From 1-Year Surveillance Within a School Setting in Rural Coastal Kenya. Open Forum Infect Dis. 2020 Oct; 7(10):ofaa385. Luka MM, Kamau E, Adema I, Munywoki PK, Otieno GP, Gicheru E, Gichuki A, Kibinge N, Agoti CN, Nokes DJ. PMID: 33094115; PMCID: PMC7568438.
      View in: PubMed   Mentions: 9  
    21. Genomic epidemiology and evolutionary dynamics of respiratory syncytial virus group B in Kilifi, Kenya, 2015-17. Virus Evol. 2020 Jul; 6(2):veaa050. Kamau E, Otieno JR, Murunga N, Oketch JW, Ngoi JM, de Laurent ZR, Mwema A, Nyiro JU, Agoti CN, Nokes DJ. PMID: 32913665; PMCID: PMC7474930.
      View in: PubMed   Mentions: 4  
    22. Recombination Analysis of Non-Poliovirus Members of the Enterovirus C Species; Restriction of Recombination Events to Members of the Same 3DPol Cluster. Viruses. 2020 06 30; 12(7). Brouwer L, Benschop KSM, Nguyen D, Kamau E, Pajkrt D, Simmonds P, Wolthers KC. PMID: 32629843; PMCID: PMC7412211.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    23. Transmission and evolutionary dynamics of human coronavirus OC43 strains in coastal Kenya investigated by partial spike sequence analysis, 2015-16. Virus Evol. 2020 Jan; 6(1):veaa031. Abidha CA, Nyiro J, Kamau E, Abdullahi O, Nokes DJ, Agoti CN. PMID: 32523779; PMCID: PMC7266483.
      View in: PubMed   Mentions: 3  
    24. Correction to: Whole genome sequencing and phylogenetic analysis of human metapneumovirus strains from Kenya and Zambia. BMC Genomics. 2020 01 28; 21(1):83. Kamau E, Oketch JW, de Laurent ZR, Phan MVT, Agoti CN, Nokes DJ, Cotten M. PMID: 31992192; PMCID: PMC6988315.
      View in: PubMed   Mentions:    Fields:    
    25. Whole genome sequencing and phylogenetic analysis of human metapneumovirus strains from Kenya and Zambia. BMC Genomics. 2020 Jan 02; 21(1):5. Kamau E, Oketch JW, de Laurent ZR, Phan MVT, Agoti CN, Nokes DJ, Cotten M. PMID: 31898474; PMCID: PMC6941262.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    26. Congenital microcephaly unrelated to flavivirus exposure in coastal Kenya. Wellcome Open Res. 2019; 4:179. Barsosio HC, Gitonga JN, Karanja HK, Nyamwaya DK, Omuoyo DO, Kamau E, Hamaluba MM, Nyiro JU, Kitsao BS, Nyaguara A, Mwakio S, Newton CR, Sang R, Wright D, Sanders EJ, Seale AC, Agoti CN, Berkley JA, Bejon P, Warimwe GM. PMID: 32175480; PMCID: PMC7059837.
      View in: PubMed   Mentions: 7  
    27. Genome Sequences of Human Coronavirus OC43 and NL63, Associated with Respiratory Infections in Kilifi, Kenya. Microbiol Resour Announc. 2019 Nov 14; 8(46). Kamau E, Luka MM, de Laurent ZR, Adema I, Agoti CN, Nokes DJ. PMID: 31727697; PMCID: PMC6856263.
      View in: PubMed   Mentions: 2  
    28. Human metapneumovirus prevalence and patterns of subgroup persistence identified through surveillance of pediatric pneumonia hospital admissions in coastal Kenya, 2007-2016. BMC Infect Dis. 2019 Aug 30; 19(1):757. Oketch JW, Kamau E, Otieno GP, Otieno JR, Agoti CN, Nokes DJ. PMID: 31470805; PMCID: PMC6716807.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansCellsPHPublic Health
    29. Increase in Enterovirus D68 Infections in Young Children, United Kingdom, 2006-2016. Emerg Infect Dis. 2019 06; 25(6):1200-1203. Kamau E, Harvala H, Blomqvist S, Nguyen D, Horby P, Pebody R, Simmonds P. PMID: 30855226; PMCID: PMC6537723.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    30. An Intensive, Active Surveillance Reveals Continuous Invasion and High Diversity of Rhinovirus in Households. J Infect Dis. 2019 03 15; 219(7):1049-1057. Kamau E, Onyango CO, Otieno GP, Kiyuka PK, Agoti CN, Medley GF, Cane PA, Nokes DJ, Munywoki PK. PMID: 30576538; PMCID: PMC6420174.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    31. Complete Genome Sequences of Dengue Virus Type 2 Strains from Kilifi, Kenya. Microbiol Resour Announc. 2019 Jan; 8(4). Kamau E, Agoti CN, Ngoi JM, de Laurent ZR, Gitonga J, Cotten M, Phan MVT, Nokes DJ, Delwart E, Sanders E, Warimwe GM. PMID: 30701251; PMCID: PMC6346200.
      View in: PubMed   Mentions: 11  
    32. Human rhinovirus spatial-temporal epidemiology in rural coastal Kenya, 2015-2016, observed through outpatient surveillance. Wellcome Open Res. 2018; 3:128. Morobe JM, Nyiro J, Brand S, Kamau E, Gicheru E, Eyase F, Otieno G, Munywoki P, Agoti C, Nokes J. PMID: 30483602; PMCID: PMC6234744.
      View in: PubMed   Mentions: 10  
    33. Surveillance of respiratory viruses in the outpatient setting in rural coastal Kenya: baseline epidemiological observations. Wellcome Open Res. 2018; 3:89. Nyiro JU, Munywoki P, Kamau E, Agoti C, Gichuki A, Etyang T, Otieno G, Nokes DJ. PMID: 30175247; PMCID: PMC6081997.
      View in: PubMed   Mentions: 26  
    34. Human Coronavirus NL63 Molecular Epidemiology and Evolutionary Patterns in Rural Coastal Kenya. J Infect Dis. 2018 05 05; 217(11):1728-1739. Kiyuka PK, Agoti CN, Munywoki PK, Njeru R, Bett A, Otieno JR, Otieno GP, Kamau E, Clark TG, van der Hoek L, Kellam P, Nokes DJ, Cotten M. PMID: 29741740; PMCID: PMC6037089.
      View in: PubMed   Mentions: 82     Fields:    Translation:HumansCells
    35. Transmission patterns and evolution of respiratory syncytial virus in a community outbreak identified by genomic analysis. Virus Evol. 2017 Jan; 3(1):vex006. Agoti CN, Munywoki PK, Phan MVT, Otieno JR, Kamau E, Bett A, Kombe I, Githinji G, Medley GF, Cane PA, Kellam P, Cotten M, Nokes DJ. PMID: 28458916; PMCID: PMC5399923.
      View in: PubMed   Mentions: 19  
    36. A26 Transmission patterns and evolution of RSV in a community outbreak identified by genomic analysis. Virus Evol. 2017 Mar; 3(Suppl 1). Agoti CN, Munywoki PK, Phan MVT, Otieno JR, Kamau E, Bett A, Kombe I, Githinji G, Medley GF, Cane PA, Kellam P, Cotton M, Nokes DJ. PMID: 28845270; PMCID: PMC5565982.
      View in: PubMed   Mentions: 3  
    37. Spread and Evolution of Respiratory Syncytial Virus A Genotype ON1, Coastal Kenya, 2010-2015. Emerg Infect Dis. 2017 02; 23(2):264-271. Otieno JR, Kamau EM, Agoti CN, Lewa C, Otieno G, Bett A, Ngama M, Cane PA, Nokes DJ. PMID: 28098528; PMCID: PMC5324789.
      View in: PubMed   Mentions: 38     Fields:    Translation:HumansCellsPHPublic Health
    38. Recent sequence variation in probe binding site affected detection of respiratory syncytial virus group B by real-time RT-PCR. J Clin Virol. 2017 03; 88:21-25. Kamau E, Agoti CN, Lewa CS, Oketch J, Owor BE, Otieno GP, Bett A, Cane PA, Nokes DJ. PMID: 28107671; PMCID: PMC5331890.
      View in: PubMed   Mentions: 31     Fields:    Translation:HumansCells
    39. Human Rhinovirus B and C Genomes from Rural Coastal Kenya. Genome Announc. 2016 Jul 28; 4(4). Agoti CN, Kiyuka PK, Kamau E, Munywoki PK, Bett A, van der Hoek L, Kellam P, Nokes DJ, Cotten M. PMID: 27469941; PMCID: PMC4966474.
      View in: PubMed   Mentions: 2  
    40. Transforming growth factor β2 promotes transcription of COX2 and EP4, leading to a prostaglandin E2-driven autostimulatory loop that enhances virulence of Theileria annulata-transformed macrophages. Infect Immun. 2015 May; 83(5):1869-80. Haidar M, Echebli N, Ding Y, Kamau E, Langsley G. PMID: 25690101; PMCID: PMC4399038.
      View in: PubMed   Mentions: 18     Fields:    Translation:AnimalsCells
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