Fernaldo Richtia Winnerdy, PhD
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| Title(s) | Postdoctoral Scholar, Biochemistry and Biophysics |
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| School | School of Medicine |
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| Address | 600 16th Street, #S414
San Francisco CA 94158
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| Phone | 415-476-3937 |
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ORCID
.gif) | 0000-0002-5010-4719  |
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| vCard | Download vCard |
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Biography
| Nanyang Technological University, Singapore | PhD | 02/2019 | Biophysics |
| National University of Singapore, Singapore | BSc | 05/2014 | Physics |
ORNG Applications
Bibliographic
Altmetrics Details
PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media.
(Note that publications are often cited in additional ways that are not shown here.)
Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication.
Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication.
Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.)
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Stable bulged G-quadruplexes in the human genome: identification, experimental validation and functionalization. Nucleic Acids Res. 2023 05 22; 51(9):4148-4177.
Papp C, Mukundan VT, Jenjaroenpun P, Winnerdy FR, Ow GS, Phan AT, Kuznetsov VA. PMID: 37094040; PMCID: PMC10201450.
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PubMed Mentions: Fields:
Translation:
HumansCells
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Crystal structures of an HIV-1 integrase aptamer: Formation of a water-mediated A•G•G•G•G pentad in an interlocked G-quadruplex. Biochem Biophys Res Commun. 2022 07 12; 613:153-158.
Ngo KH, Liew CW, Lattmann S, Winnerdy FR, Phan AT. PMID: 35561583.
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PubMed Mentions: Fields:
Translation:
Cells
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Four-Layered Intramolecular Parallel G-Quadruplex with Non-Nucleotide Loops: An Ultra-Stable Self-Folded DNA Nano-Scaffold. ACS Nano. 2022 01 25; 16(1):533-540.
Devi G, Winnerdy FR, Ang JCY, Lim KW, Phan AT. PMID: 34927423.
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PubMed Mentions: Fields:
Translation:
Cells
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Unprecedented hour-long residence time of a cation in a left-handed G-quadruplex. Chem Sci. 2021 Apr 26; 12(20):7151-7157.
Winnerdy FR, Bakalar B, Das P, Heddi B, Marchand A, Rosu F, Gabelica V, Phan AT. PMID: 34123342; PMCID: PMC8153214.
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PubMed Mentions:
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Duplexes Formed by G4C2 Repeats Contain Alternate Slow- and Fast-Flipping G·G Base Pairs. Biochemistry. 2021 04 13; 60(14):1097-1107.
Maity A, Winnerdy FR, Chen G, Phan AT. PMID: 33750098.
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PubMed Mentions:
4 Fields:
Translation:
Cells
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The biofilm matrix scaffold of Pseudomonas aeruginosa contains G-quadruplex extracellular DNA structures. NPJ Biofilms Microbiomes. 2021 03 19; 7(1):27.
Seviour T, Winnerdy FR, Wong LL, Shi X, Mugunthan S, Foo YH, Castaing R, Adav SS, Subramoni S, Kohli GS, Shewan HM, Stokes JR, Rice SA, Phan AT, Kjelleberg S. PMID: 33741996; PMCID: PMC7979868.
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PubMed Mentions:
10 Fields:
Translation:
Cells
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A novel minimal motif for left-handed G-quadruplex formation. Chem Commun (Camb). 2021 Mar 09; 57(20):2527-2530.
Das P, Winnerdy FR, Maity A, Mechulam Y, Phan AT. PMID: 33690751.
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PubMed Mentions:
1 Fields:
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Bulges in left-handed G-quadruplexes. Nucleic Acids Res. 2021 02 22; 49(3):1724-1736.
Das P, Ngo KH, Winnerdy FR, Maity A, Bakalar B, Mechulam Y, Schmitt E, Phan AT. PMID: 33503265; PMCID: PMC7897477.
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PubMed Mentions:
4 Fields:
Translation:
Cells
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Coexistence of two quadruplex-duplex hybrids in the PIM1 gene. Nucleic Acids Res. 2020 11 04; 48(19):11162-11171.
Tan DJY, Winnerdy FR, Lim KW, Phan AT. PMID: 32976598; PMCID: PMC7641742.
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PubMed Mentions:
9 Fields:
Translation:
HumansCells
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Post-translational formation of strained cyclophanes in bacteria. Nat Chem. 2020 11; 12(11):1042-1053.
Nguyen TQN, Tooh YW, Sugiyama R, Nguyen TPD, Purushothaman M, Leow LC, Hanif K, Yong RHS, Agatha I, Winnerdy FR, Gugger M, Phan AT, Morinaka BI. PMID: 32807886.
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PubMed Mentions:
23 Fields:
Translation:
Cells
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Guanine anchoring: a strategy for specific targeting of a G-quadruplex using short PNA, LNA and DNA molecules. Chem Commun (Camb). 2020 Jun 02; 56(44):5897-5900.
Tan DJY, Das P, Winnerdy FR, Lim KW, Phan AT. PMID: 32338660.
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PubMed Mentions:
4 Fields:
Translation:
Cells
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Intra-locked G-quadruplex structures formed by irregular DNA G-rich motifs. Nucleic Acids Res. 2020 04 06; 48(6):3315-3327.
Maity A, Winnerdy FR, Chang WD, Chen G, Phan AT. PMID: 32100003; PMCID: PMC7102960.
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PubMed Mentions:
12 Fields:
Translation:
HumansCells
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Extracellular protein isolation from the matrix of anammox biofilm using ionic liquid extraction. Appl Microbiol Biotechnol. 2020 Apr; 104(8):3643-3654.
Wong LL, Natarajan G, Boleij M, Thi SS, Winnerdy FR, Mugunthan S, Lu Y, Lee JM, Lin Y, van Loosdrecht M, Law Y, Kjelleberg S, Seviour T. PMID: 32095864.
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PubMed Mentions:
5 Fields:
Translation:
Cells
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Cytosine epigenetic modification modulates the formation of an unprecedented G4 structure in the WNT1 promoter. Nucleic Acids Res. 2020 02 20; 48(3):1120-1130.
Wang ZF, Li MH, Chu IT, Winnerdy FR, Phan AT, Chang TC. PMID: 31912153; PMCID: PMC7026657.
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PubMed Mentions:
2 Fields:
Translation:
Cells
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Solution Structures of a G-Quadruplex Bound to Linear- and Cyclic-Dinucleotides. J Am Chem Soc. 2019 11 13; 141(45):18038-18047.
Winnerdy FR, Das P, Heddi B, Phan AT. PMID: 31661272.
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PubMed Mentions:
11 Fields:
Translation:
Cells
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NMR solution and X-ray crystal structures of a DNA molecule containing both right- and left-handed parallel-stranded G-quadruplexes. Nucleic Acids Res. 2019 09 05; 47(15):8272-8281.
Winnerdy FR, Bakalar B, Maity A, Vandana JJ, Mechulam Y, Schmitt E, Phan AT. PMID: 31216034; PMCID: PMC6735952.
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PubMed Mentions:
14 Fields:
Translation:
Cells
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An Unprecedented Knot-like G-Quadruplex Peripheral Motif. Angew Chem Int Ed Engl. 2019 09 23; 58(39):13834-13839.
Truong THA, Winnerdy FR, Phan AT. PMID: 31317601.
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PubMed Mentions:
6 Fields:
Translation:
HumansCells
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Bright G-Quadruplex Nanostructures Functionalized with Porphyrin Lanterns. J Am Chem Soc. 2019 08 14; 141(32):12582-12591.
Pathak P, Yao W, Hook KD, Vik R, Winnerdy FR, Brown JQ, Gibb BC, Pursell ZF, Phan AT, Jayawickramarajah J. PMID: 31322869; PMCID: PMC8170694.
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PubMed Mentions:
8 Fields:
Translation:
Cells
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Structure of a (3+1) hybrid G-quadruplex in the PARP1 promoter. Nucleic Acids Res. 2019 02 20; 47(3):1564-1572.
Sengar A, Vandana JJ, Chambers VS, Di Antonio M, Winnerdy FR, Balasubramanian S, Phan AT. PMID: 30551210; PMCID: PMC6379715.
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PubMed Mentions:
24 Fields:
Translation:
HumansCells
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A Catalytic and Selective Scissoring Molecular Tool for Quadruplex Nucleic Acids. J Am Chem Soc. 2018 11 07; 140(44):14528-14532.
Nadai M, Doria F, Scalabrin M, Pirota V, Grande V, Bergamaschi G, Amendola V, Winnerdy FR, Phan AT, Richter SN, Freccero M. PMID: 30351011; PMCID: PMC6242190.
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PubMed Mentions:
15 Fields:
Translation:
Cells
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Analysis of Interactions between Telomeric i-Motif DNA and a Cyclic Tetraoxazole Compound. Chembiochem. 2018 11 02; 19(21):2268-2272.
Sedghi Masoud S, Yamaoki Y, Ma Y, Marchand A, Winnerdy FR, Gabelica V, Phan AT, Katahira M, Nagasawa K. PMID: 30160816.
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PubMed Mentions:
5 Fields:
Translation:
Cells
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Rotation of Guanine Amino Groups in G-Quadruplexes: A Probe for Local Structure and Ligand Binding. Biophys J. 2017 Aug 22; 113(4):775-784.
Adrian M, Winnerdy FR, Heddi B, Phan AT. PMID: 28834714; PMCID: PMC5567425.
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PubMed Mentions:
7 Fields:
Translation:
Cells
This graph shows the total number of publications by year. To see the data as text,
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| Year | Publications |
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| 2017 | 1 |
| 2018 | 2 |
| 2019 | 5 |
| 2020 | 6 |
| 2021 | 6 |
| 2022 | 1 |
| 2023 | 1 |
This graph shows the number and percent of publications by field.
Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications.
Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written.
To see the data as text,
click here.
This graph shows the number and percent of publications by field.
Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications.
Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written.
To see the data as text,
click here.
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