Martin Cilnis

Title(s)Research Data Analyst 4, StrategicInfo&PubHealthPrac
SchoolChancellor/EVC/FAS
Address654 Minnesota Street
San Francisco CA 94107
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Model-Based Analysis of Impact, Costs, and Cost-effectiveness of Tuberculosis Outbreak Investigations, United States. Emerg Infect Dis. 2025 Mar; 31(3):497-506. Shrestha S, Cilloni L, Asay GRB, Kammerer JS, Raz K, Shaw T, Cilnis M, Wortham J, Marks SM, Dowdy D. PMID: 40023804; PMCID: PMC11878319.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansPHPublic Health
    2. Tuberculosis Diagnostic Delays and Treatment Outcomes among Patients with COVID-19, California, USA, 2020. Emerg Infect Dis. 2024 01; 30(1):136-140. Han E, Nabity SA, Dasgupta-Tsinikas S, Guevara RE, Moore M, Kadakia A, Henry H, Cilnis M, Buhain S, Chitnis A, Chakrabarty M, Ky A, Nguyen Q, Low J, Jain S, Higashi J, Barry PM, Flood J. PMID: 38147063; PMCID: PMC10756354.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    3. Mutation of Mycobacterium tuberculosis and Implications for Using Whole-Genome Sequencing for Investigating Recent Tuberculosis Transmission. Front Public Health. 2021; 9:790544. Nelson KN, Talarico S, Poonja S, McDaniel CJ, Cilnis M, Chang AH, Raz K, Noboa WS, Cowan L, Shaw T, Posey J, Silk BJ. PMID: 35096744; PMCID: PMC8793027.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansCells
    4. Logically Inferred Tuberculosis Transmission (LITT): A Data Integration Algorithm to Rank Potential Source Cases. Front Public Health. 2021; 9:667337. Winglee K, McDaniel CJ, Linde L, Kammerer S, Cilnis M, Raz KM, Noboa W, Knorr J, Cowan L, Reynolds S, Posey J, Sullivan Meissner J, Poonja S, Shaw T, Talarico S, Silk BJ. PMID: 34235130; PMCID: PMC8255782.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    5. Solid Organ Transplant-Transmitted Tuberculosis Linked to a Community Outbreak - California, 2015. MMWR Morb Mortal Wkly Rep. 2017 Aug 04; 66(30):801-805. Kay A, Barry PM, Annambhotla P, Greene C, Cilnis M, Chin-Hong P, Arger N, McNitt L, Neidlinger N, Shah N, Basavaraju SV, Kuehnert M, Shaw T. PMID: 28771459; PMCID: PMC5720876.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansPHPublic Health
    6. Genomic epidemiology of multidrug-resistant Mycobacterium tuberculosis during transcontinental spread. J Infect Dis. 2015 Jul 15; 212(2):302-10. Coscolla M, Barry PM, Oeltmann JE, Koshinsky H, Shaw T, Cilnis M, Posey J, Rose J, Weber T, Fofanov VY, Gagneux S, Kato-Maeda M, Metcalfe JZ. PMID: 25601940; PMCID: PMC4490235.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansCellsPHPublic Health
    7. Epidemiology of tuberculosis cases with end-stage renal disease, California, 2010. Am J Nephrol. 2014; 39(4):314-21. Chitnis AS, Schecter GF, Cilnis M, Robsky K, Flood JM, Barry PM. PMID: 24751696.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCellsPHPublic Health
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