| University of California, San Francisco | 2015 | | 150th Anniversary Alumni Excellence Award |
| Institute of Medicine, National Academy of Sciences | 2013 | | Gustav O. Lienhard Award |
| The White House | 2013 | | Champion of Change for Public Health and Prevention Nomination |
| Marin Community Clinics | 2013 | | Summer Solstice Award: Community Health Champion |
| Society of Behavioral Medicine | 2013 | | National Leadership Award |
| University of California, San Francisco, Division of General Internal Medicine | 2012 | | Robert H. Crede Award of Excellence in Community Service |
| Ben Gurion University | 2010 | | Honorary Professor of Medicine |
| Association of American Medical Colleges | 2008 | | David E. Rogers Award |
| American Society of Health-System Pharmacists | 2008 | | Board of Directors Award of Honor |
| New England Journal of Medicine and Massachusetts Medical Society | 2008 | | Shattuck Lecture Panelist |
| The Smoke Free Project, Children's National Medical Center | 2008 | | Smoke Free Champion Award |
| American Legacy Foundation | 2008 | | Schroeder Institute Inauguration |
| New England Journal of Medicine and Massachusetts Medical Society | 2007 | | Shattuck Lecturer |
| American College of Physicians | 2007 | | James D. Bruce Memorial Award for Distinguished Contributions in Preventive Medicine |
| University of Iowa, College of Public Health | 2007 | | Richard and Barbara Hansen Leadership Award and Distinguished Lectureship |
| University of California, San Francisco | 2007 | | Gold Headed Cane Society Induction |
| American Legacy Foundation | 2006 | | National Institute for Tobacco Research and Policy Studies Naming |
| Gold Humanism Honor Society | 2004 | | Membership Award |
| University of California, Berkeley, School of Public Health | 2004 | | National Public Health Hero |
| University of California, Berkeley | 2003 | | Regent's Professor |
| American Hospital Association | 2003 | | The Award of Honor |
| American Psychosomatic Society Annual Scientific Meeting | 2003 | | Alvin P. Shapiro Award |
| Campaign for Tobacco-Free Kids | 2003 | | Champion Award, Youth Advocate of the Year Award |
| National Academy of State Health Policy | 2002 | | Academy Award for Excellence in State Health Policy and Practice |
| Association of American Medical Colleges | 2002 | | Special Recognition Award |
| Ambulatory Pediatric Association | 2002 | | Armstrong Award (for RWJF) |
| Columbia University School of Nursing | 2002 | | Second Century Award for Excellence in Health Care |
| Community Anti-Drug Coalitions of America | 2001 | | National Leadership Award |
| University of Pittsburgh Graduate School of Public Health | 2001 | | Porter Prize |
| Society of Public Health Education | 2000 | | Honorary Fellow |
| New Jersey Medicine | 1999 | | Person of the Year |
| Alpha Omega Alpha | 1999 | | Leaders in American Medicine Video Series Honor |
| American Cancer Society | 1996 | | Medal of Honor |
| Society of General Internal Medicine | 1996 | | Robert J. Glaser Award |
| American College of Physicians | 1995 | | Mastership |
| The Lotos Club | 1994 | | Honored at State Dinner |
| UniHealth America Foundation | 1993 | | Pinnacle Award |
| American College of Physicians | 1992 | | Certificate of Achievement |
| Ben Gurion University of the Negev | 1987 | | Dozor Visiting Professor in Internal Medicine at the Faculty of Sciences |
| Institute of Medicine, National Academy of Sciences | 1982 | | Member |
| Alpha Omega Alpha Honor Medical Society | 1964 | | Alpha Omega Alpha |
| The Phi Beta Kappa Society | 1959 | | Phi Beta Kappa |