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Austin Hughes

Photo of Austin Hughes
Title(s)Research Supervisor, Institute for Neurodegenerative Diseases
SchoolSchool of Medicine
Address675 Nelson Rising Lane, #001
San Francisco CA 94158
Phone415-514-7618
PronounsHe/Him/His
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    Collapse education and training
    Harvard University, Cambridge, MAA.B.Molecular and Cellular Biology
    University of California, San Francisco, San Francisco, CA
    University of California, Davis, Davis, CA
    University of California, San Francisco05/2021Diversity, Equity, and Inclusion Champion Training

    Collapse Overview 
    Collapse overview
    Research Supervisor for the Institute for Neurodegenerative Diseases


    Laboratory of Stanley Prusiner, M.D.

    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
    Newest   |   Oldest   |   Most Cited   |   Most Discussed   |   Timeline   |   Field Summary   |   Plain Text
    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Can't Stop the Music? Musical Hallucinations From Postoperative Tramadol Use: Case Report and Literature Review. Arthroplast Today. 2026 Feb; 37:101928. Hughes AG, Pate J, Dunson J, Freeman MG. PMID: 41541007; PMCID: PMC12799791.
      View in: PubMed   Mentions:
    2. Arthroscopic Iliopsoas Lengthening Is a Safe and Effective Treatment for Anterior Iliopsoas Impingement After Total Hip Arthroplasty. Arthrosc Sports Med Rehabil. 2025 Dec; 7(6):101262. Pate J, Hughes A, Morrow D, Goodwin TM, Wilson A, Cincere B. PMID: 41541539; PMCID: PMC12800852.
      View in: PubMed   Mentions:
    3. Inverted Cyclops Lesion Following Anterior Cruciate Ligament Repair: A Case Report. J Orthop Case Rep. 2025 Sep; 15(9):154-158. Litten R, Pate J, Hughes A, Dunson J, Smith C, Bruce J. PMID: 40936852; PMCID: PMC12422662.
      View in: PubMed   Mentions:
    4. Tibial Glomus Tumor: A Case Report and Literature Review of Unusual Orthopaedic Glomus Tumor Presentation. Foot Ankle Spec. 2025 May 09; 19386400251326242. Jagiella-Lodise O, Duff JR, Goodwin TM, Hughes AG, Murray RD, Voskuil RT. PMID: 40340695.
      View in: PubMed   Mentions:    Fields:    
    5. Recent Developments in Ventricular Assist Device Therapy. Rev Cardiovasc Med. 2025 Jan; 26(1):25440. Moctezuma-Ramirez A, Mohammed H, Hughes A, Elgalad A. PMID: 39867170; PMCID: PMC11760545.
      View in: PubMed   Mentions: 3     Fields:    
    6. Resiliency Does Not Correlate With Outcome Scores After Meniscectomy. Bull Hosp Jt Dis (2013). 2024 Sep; 82(3):194-198. Hughes AG, Murali S, Stroud WR, Arguello AM, McGwin GW, Brabston EW, Ponce BA, Momaya AM. PMID: 39150873.
      View in: PubMed   Mentions: Translation:Humans
    7. Arthroscopic Primary Repair of Proximally Based Anterior Cruciate Ligament Tear With Augmentation and All-Epiphyseal Fixation. Arthrosc Tech. 2024 Sep; 13(9):103040. Morrow DL, Hughes AG, Murray RD, Bruce JR. PMID: 39308583; PMCID: PMC11411292.
      View in: PubMed   Mentions: 1  
    8. Sickle cell trait is not associated with an increased risk of heart failure or abnormalities of cardiac structure and function. Blood. 2017 02 09; 129(6):799-801. Bello NA, Hyacinth HI, Roetker NS, Seals SR, Naik RP, Derebail VK, Kshirsagar AV, Key NS, Wilson JG, Correa A, Adams RJ, Egede LD, Longstreth WT, Choudhary G, Gee BE, Hughes AL, Shah AM, Manson JE, Allison M, Burke GL, Folsom AR, Carty CL, Reiner AP, Solomon SD, Konety SH. PMID: 27932373; PMCID: PMC5301821.
      View in: PubMed   Mentions: 10     Fields:    Translation:Humans
    9. Arteriviruses, Pegiviruses, and Lentiviruses Are Common among Wild African Monkeys. J Virol. 2016 08 01; 90(15):6724-6737. Bailey AL, Lauck M, Ghai RR, Nelson CW, Heimbruch K, Hughes AL, Goldberg TL, Kuhn JH, Jasinska AJ, Freimer NB, Apetrei C, O'Connor DH. PMID: 27170760; PMCID: PMC4944300.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansAnimalsCells
    10. Selective Bottlenecks Shape Evolutionary Pathways Taken during Mammalian Adaptation of a 1918-like Avian Influenza Virus. Cell Host Microbe. 2016 Feb 10; 19(2):169-80. Moncla LH, Zhong G, Nelson CW, Dinis JM, Mutschler J, Hughes AL, Watanabe T, Kawaoka Y, Friedrich TC. PMID: 26867176; PMCID: PMC4761429.
      View in: PubMed   Mentions: 39     Fields:    Translation:HumansAnimalsCells
    11. Conditional Immune Escape during Chronic Simian Immunodeficiency Virus Infection. J Virol. 2016 Jan 01; 90(1):545-52. Gellerup DD, Balgeman AJ, Nelson CW, Ericsen AJ, Scarlotta M, Hughes AL, O'Connor SL. PMID: 26491171; PMCID: PMC4702533.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    12. Life-history evolution at the molecular level: adaptive amino acid composition of avian vitellogenins. Proc Biol Sci. 2015 Aug 07; 282(1812):20151105. Hughes AL. PMID: 26224713; PMCID: PMC4528526.
      View in: PubMed   Mentions: 3     Fields:    Translation:Animals
    13. Selection Maintains Low Genomic GC Content in Marine SAR11 Lineages. Mol Biol Evol. 2015 Oct; 32(10):2738-48. Luo H, Thompson LR, Stingl U, Hughes AL. PMID: 26116859.
      View in: PubMed   Mentions: 30     Fields:    Translation:Cells
    14. Stability of social behavior in captive American Flamingos (Phoenicopterus ruber): A quantitative case study. Zoo Biol. 2015; 34(4):305-13. Hughes AL. PMID: 25884784.
      View in: PubMed   Mentions: 1     Fields:    Translation:Animals
    15. Adaptive amino acid composition in collagens of parasitic nematodes. Infect Genet Evol. 2015 Apr; 31:277-83. Hughes AL. PMID: 25681700.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    16. Cross-clade simultaneous HIV drug resistance genotyping for reverse transcriptase, protease, and integrase inhibitor mutations by Illumina MiSeq. Retrovirology. 2014 Dec 23; 11:122. Dudley DM, Bailey AL, Mehta SH, Hughes AL, Kirk GD, Westergaard RP, O'Connor DH. PMID: 25533166; PMCID: PMC4302432.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansCells
    17. Within-host nucleotide diversity of virus populations: insights from next-generation sequencing. Infect Genet Evol. 2015 Mar; 30:1-7. Nelson CW, Hughes AL. PMID: 25481279; PMCID: PMC4316684.
      View in: PubMed   Mentions: 57     Fields:    Translation:HumansAnimals
    18. Evolutionary diversification of the vertebrate transferrin multi-gene family. Immunogenetics. 2014 Nov; 66(11):651-61. Hughes AL, Friedman R. PMID: 25142446; PMCID: PMC4255964.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansAnimalsCells
    19. Evolutionary diversification of aminopeptidase N in Lepidoptera by conserved clade-specific amino acid residues. Mol Phylogenet Evol. 2014 Jul; 76:127-33. Hughes AL. PMID: 24675701; PMCID: PMC4372138.
      View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells
    20. Evolutionary diversification of insect innexins. J Insect Sci. 2014; 14. Hughes AL. PMID: 25502029; PMCID: PMC5634128.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    21. Conflicting selection pressures target the NS3 protein in hepatitis C virus genotypes 1a and 1b. Virus Res. 2010 Feb; 147(2):202-7. Irausquin SJ, Hughes AL. PMID: 19896990; PMCID: PMC3529174.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    22. Small effective population sizes and rare nonsynonymous variants in potyviruses. Virology. 2009 Oct 10; 393(1):127-34. Hughes AL. PMID: 19695658; PMCID: PMC2756233.
      View in: PubMed   Mentions: 11     Fields:    Translation:Cells
    23. Nucleotide sequence polymorphism at the apical membrane antigen-1 locus reveals population history of Plasmodium vivax in Thailand. Infect Genet Evol. 2009 Dec; 9(6):1295-300. Putaporntip C, Jongwutiwes S, Grynberg P, Cui L, Hughes AL. PMID: 19643205; PMCID: PMC2790030.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansAnimalsCells
    24. Ultradeep pyrosequencing detects complex patterns of CD8+ T-lymphocyte escape in simian immunodeficiency virus-infected macaques. J Virol. 2009 Aug; 83(16):8247-53. Bimber BN, Burwitz BJ, O'Connor S, Detmer A, Gostick E, Lank SM, Price DA, Hughes A, O'Connor D. PMID: 19515775; PMCID: PMC2715741.
      View in: PubMed   Mentions: 49     Fields:    Translation:AnimalsCells
    25. Characterization of cynomolgus and vervet monkey placental MHC class I expression: diversity of the nonhuman primate AG locus. Immunogenetics. 2009 Jun; 61(6):431-42. Bondarenko GI, Dambaeva SV, Grendell RL, Hughes AL, Durning M, Garthwaite MA, Golos TG. PMID: 19468726; PMCID: PMC2810720.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCells
    26. Relaxation of purifying selection on the SAD lineage of live attenuated oral vaccines for rabies virus. Infect Genet Evol. 2009 Sep; 9(5):827-31. Hughes AL. PMID: 19409512; PMCID: PMC2720423.
      View in: PubMed   Mentions: 2     Fields:    Translation:Cells
    27. More radical amino acid replacements in primates than in rodents: support for the evolutionary role of effective population size. Gene. 2009 Jul 01; 440(1-2):50-6. Hughes AL, Friedman R. PMID: 19332110; PMCID: PMC2706701.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansAnimals
    28. Natural selection maintains a stable polymorphism at the circumsporozoite protein locus of Plasmodium falciparum in a low endemic area. Infect Genet Evol. 2009 Jul; 9(4):567-73. Putaporntip C, Jongwutiwes S, Hughes AL. PMID: 19460323; PMCID: PMC4009382.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansAnimalsCellsPHPublic Health
    29. Relaxation of purifying selection on live attenuated vaccine strains of the family Paramyxoviridae. Vaccine. 2009 Mar 10; 27(11):1685-90. Hughes AL. PMID: 19195493; PMCID: PMC2707849.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    30. A phylogenetic approach to gene expression data: evidence for the evolutionary origin of mammalian leukocyte phenotypes. Evol Dev. 2009; 11(4):382-90. Hughes AL, Friedman R. PMID: 19601972; PMCID: PMC2810715.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
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