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Seema Singh Saharan, PhD

Photo of Seema Singh Saharan, PhD
Title(s)Postdoctoral Scholar, Radiology
SchoolSchool of Medicine
Address185 Berry Street Bldg B, #7T2
San Francisco CA 94107
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    University of Rajasthan , India Ph.D.5/2023Statistics Focused on Data Science algorithms . Ph.D. Thesis Research with Dr John Kane ,CVRI, UCSF

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    Seema Saharan is a postdoctoral scholar in the Department of Radiology and Biomedical Imaging at UCSF, specializing in radiology image analysis, large language models (LLMs), and multimodal data integration. Her research combines deep learning, causal inference, and agentic AI frameworks to advance diagnostic accuracy, outcome prediction, and equitable implementation of precision medicine.

    Her expertise spans data science, biostatistics, and AI-driven methodologies, with a focus on integrating radiology imaging, biomedical signals, and high-dimensional biomolecular data. She develops AI-powered diagnostic tools that leverage computer vision, neural networks, and multimodal fusion techniques for early disease detection, risk stratification, and personalized treatment strategies.

    Seema also contributes to NIH-funded projects addressing Alzheimer’s disease, chronic pain, and disparities in molecular diagnostics access. Her work involves scalable pipelines for large claims datasets, NLP-driven extraction of unstructured EHR data, and transformer-based approaches (BERT, BioBERT, ClinicalBERT) for analyzing ctDNA testing pathways.

    She holds a Ph.D. in Statistics with a Data Science Algorithmic focus, where she optimized statistical models of cytokine cascades transported by HDL/Plasma to inform cardiovascular and Alzheimer’s disease research. In collaboration with UCSF’s Cardiovascular Research Institute, she has developed LLM-enabled diagnostic frameworks that integrate cytokine biomarkers, clinical data, and biomedical literature, incorporating retrieval-augmented generation (RAG), SHAP-based explainability, and causal inference approaches.

    Beyond research, Seema is passionate about building standardized AI ecosystems for healthcare that are interpretable, secure, and clinically impactful. She is also an experienced educator, serving as a lecturer at UC Berkeley Extension and California State University, East Bay, where she teaches courses in data science, AI, and biostatistics.
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Machine Learning-Based Model for Predicting Coronary Heart Disease Using Preβ HDL and Cytokines as Plasma Biomarkers. Proc (Int Conf Comput Sci Comput Intell). 2025; 2507:139-153. Saharan SS, Creasy KT, Birnbaum L, Stock EO, Mustra Rakic J, Tian X, Prakash A, Malloy M, Kane J. PMID: 40955341; PMCID: PMC12433607.
      View in: PubMed   Mentions:
    2. Smoking Classification Using Novel Plasma Cytokines by implementing Machine Learning and Statistical Methods. Proc (Int Conf Comput Sci Comput Intell). 2023 Dec; 2023:686-694. Saharan SS, Nagar P, Creasy KT, Stock EO, Feng J, Malloy MJ, Kane JP. PMID: 39450278; PMCID: PMC11500790.
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    3. Logistic Regression and Statistical Regularization Techniques for Risk Classification of Coronary Artery Disease using Cytokines transported by high density lipoproteins. Proc (Int Conf Comput Sci Comput Intell). 2023 Dec; 2023:652-660. Saharan SS, Nagar P, Creasy KT, Stock EO, Feng J, Malloy MJ, Kane JP. PMID: 39484231; PMCID: PMC11527457.
      View in: PubMed   Mentions: 2  
    4. Optimization of Smoking Classification by Applying Neural Network with Variable Importance Using Cytokine Biomarkers. Proc (Int Conf Comput Sci Comput Intell). 2023 Dec; 2023:661-670. Saharan SS, Nagar P, Creasy KT, Stock EO, Feng J, Malloy MJ, Kane JP. PMID: 39512263; PMCID: PMC11542929.
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    5. Application of Machine Learning Ensemble Super Learner for analysis of the cytokines transported by high density lipoproteins (HDL) of smokers and nonsmokers. Proc (Int Conf Comput Sci Comput Intell). 2021 Dec; 2021:370-375. Saharan SS, Nagar P, Creasy KT, Stock EO, Feng J, Malloy MJ, Kane JP. PMID: 39524190; PMCID: PMC11545197.
      View in: PubMed   Mentions: 1  
    6. Implementation of PCA enabled Support Vector Machine using cytokines to differentiate smokers versus nonsmokers. Proc (Int Conf Comput Sci Comput Intell). 2021 Dec; 2021:312-317. Saharan SS, Nagar P, Creasy KT, Stock EO, Feng J, Malloy MJ, Kane JP. PMID: 39493936; PMCID: PMC11530349.
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    7. Machine learning and statistical approaches for classification of risk of coronary artery disease using plasma cytokines. BioData Min. 2021 Apr 15; 14(1):26. Saharan SS, Nagar P, Creasy KT, Stock EO, Feng J, Malloy MJ, Kane JP. PMID: 33858484; PMCID: PMC8050889.
      View in: PubMed   Mentions: 8  
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