Peter Washington, PhD

Title(s)Assistant Professor, Medicine
SchoolSchool of Medicine
PronounsHe/Him/His
ORCID ORCID Icon0000-0003-3276-4411 Additional info
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    Collapse Biography 
    Collapse Education and Training
    Stanford UniversityPhD06/2022Bioengineering
    Stanford UniversityMS06/2018Computer Science
    Rice UniversityBA05/2015Computer Science
    Collapse Awards and Honors
    NIH2023  - 2028New Innovator Award
    Stanford University2020  - 2022Stanford Interdisciplinary Graduate Fellowship

    Collapse Overview 
    Collapse Overview
    I am a new assistant professor in the Division of Clinical Informatics and Digital Transformation (DoC-IT) in the Department of Medicine at UCSF. My research program focuses on computational and human-centered aspects of consumer digital health informatics, with an eventual goal of studying implementation aspects as well in order to translate these technologies into real-world practice. My group focused on building digital diagnostics, therapeutics, and monitoring tools using wearables, smartphones, websites, and specialized health hardware for a variety of health conditions that we are passionate about. I also teach Epi 233 - Introduction to Clinical Artificial Intelligence.
    Collapse Global Health Equity
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    Collapse Research 
    Collapse Research Activities and Funding
    SCH: Personalized Machine Learning for Repeat Adverse Health Events using Novel Multimodal Self-Supervised Pretraining Methods
    NSF 2516767Jan 1, 2025 - Aug 31, 2028
    Role: Principal Investigator
    Crowd-Powered Machine Learning to Diagnose ASD and ADHD in Adolescents from Digital Social Interactions
    NIH DP2EB035858Sep 21, 2023 - Sep 20, 2028
    Role: Principal Investigator

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    Collapse Featured Content 
    Collapse Featured Videos

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Analysis of Physical Activity Using Wearable Health Technology in US Adults Enrolled in the All of Us Research Program: Multiyear Observational Study. J Med Internet Res. 2024 Dec 10; 26:e65095. Singh R, Tetrick MK, Fisher JL, Washington P, Yu J, Paskett ED, Penedo FJ, Clinton SK, Benzo RM. PMID: 39658010; PMCID: PMC11668988.
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    2. Design Guidelines for Improving Mobile Sensing Data Collection: Prospective Mixed Methods Study. J Med Internet Res. 2024 Nov 18; 26:e55694. Slade C, Benzo RM, Washington P. PMID: 39556828; PMCID: PMC11632896.
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    3. Evaluating Multicultural Autism Screening for Toddlers Using Machine Learning on the QCHAT-10. medRxiv. 2024 Nov 13. Sollis LJ, Wall DP, Washington PY. PMID: 39606417; PMCID: PMC11601757.
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    4. A mixed-method exploration of #vapingcessation videos on TikTok. J Addict Dis. 2024 Oct 15; 1-9. Amin S, Chae SW, Washington PY, Okamoto SK, Youkey T, Pokhrel P. PMID: 39404137.
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    5. Ethics of the Use of Social Media as Training Data for AI Models Used for Digital Phenotyping. JMIR Form Res. 2024 Jul 17; 8:e59794. Jaiswal A, Shah A, Harjadi C, Windgassen E, Washington P. PMID: 39018549; PMCID: PMC11292144.
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    6. Addendum: Using #ActuallyAutistic on Twitter for Precision Diagnosis of Autism Spectrum Disorder: Machine Learning Study. JMIR Form Res. 2024 Jul 17; 8:e59349. Jaiswal A, Shah A, Harjadi C, Windgassen E, Washington P. PMID: 39018561; PMCID: PMC11292169.
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    7. Multimodal deep learning for dementia classification using text and audio. Sci Rep. 2024 Jun 16; 14(1):13887. Lin K, Washington PY. PMID: 38880810; PMCID: PMC11180654.
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    8. A Comparison of Personalized and Generalized Approaches to Emotion Recognition Using Consumer Wearable Devices: Machine Learning Study. JMIR AI. 2024 May 10; 3:e52171. Li J, Washington P. PMID: 38875573; PMCID: PMC11127131.
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    9. A Perspective on Crowdsourcing and Human-in-the-Loop Workflows in Precision Health. J Med Internet Res. 2024 Apr 11; 26:e51138. Washington P. PMID: 38602750; PMCID: PMC11046386.
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    10. Non-Invasive Biosensing for Healthcare Using Artificial Intelligence: A Semi-Systematic Review. Biosensors (Basel). 2024 Apr 09; 14(4). Islam T, Washington P. PMID: 38667177; PMCID: PMC11048540.
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    11. Challenges in Reducing Bias Using Post-Processing Fairness for Breast Cancer Stage Classification with Deep Learning. Algorithms. 2024 Apr; 17(4). Soltan A, Washington P. PMID: 38962581; PMCID: PMC11221567.
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    12. Personalized AI-Driven Real-Time Models to Predict Stress-Induced Blood Pressure Spikes Using Wearable Devices: Proposal for a Prospective Cohort Study. JMIR Res Protoc. 2024 Mar 25; 13:e55615. Kargarandehkordi A, Slade C, Washington P. PMID: 38526539; PMCID: PMC11002732.
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    13. Using #ActuallyAutistic on Twitter for Precision Diagnosis of Autism Spectrum Disorder: Machine Learning Study. JMIR Form Res. 2024 Feb 14; 8:e52660. Jaiswal A, Washington P. PMID: 38354045; PMCID: PMC10902768.
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    14. Digitally Diagnosing Multiple Developmental Delays Using Crowdsourcing Fused With Machine Learning: Protocol for a Human-in-the-Loop Machine Learning Study. JMIR Res Protoc. 2024 Feb 08; 13:e52205. Jaiswal A, Kruiper R, Rasool A, Nandkeolyar A, Wall DP, Washington P. PMID: 38329783; PMCID: PMC10884895.
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    15. Personalized Deep Learning for Substance Use in Hawaii: Protocol for a Passive Sensing and Ecological Momentary Assessment Study. JMIR Res Protoc. 2024 Feb 07; 13:e46493. Sun Y, Kargarandehkordi A, Slade C, Jaiswal A, Busch G, Guerrero A, Phillips KT, Washington P. PMID: 38324375; PMCID: PMC10882478.
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    16. Audio-Based Emotion Recognition Using Self-Supervised Learning on an Engineered Feature Space. AI (Basel). 2024 Mar; 5(1):195-207. Nimitsurachat P, Washington P. PMID: 38715564; PMCID: PMC11076058.
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    17. Individualized Stress Mobile Sensing Using Self-Supervised Pre-Training. Appl Sci (Basel). 2023 Nov; 13(21). Islam T, Washington P. PMID: 39507765; PMCID: PMC11540419.
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    18. Identifying crossovers and shared genetic material in whole genome sequencing data from families. Genome Res. 2023 Oct; 33(10):1747-1756. Paskov K, Chrisman B, Stockham N, Washington PY, Dunlap K, Jung JY, Wall DP. PMID: 37879861; PMCID: PMC10691535.
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    19. Localizing unmapped sequences with families to validate the Telomere-to-Telomere assembly and identify new hotspots for genetic diversity. Genome Res. 2023 Oct; 33(10):1734-1746. Chrisman B, He C, Jung JY, Stockham N, Paskov K, Washington P, Petereit J, Wall DP. PMID: 37879860; PMCID: PMC10691534.
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    20. Parkinson Disease Recognition Using a Gamified Website: Machine Learning Development and Usability Study. JMIR Form Res. 2023 Sep 29; 7:e49898. Parab S, Boster J, Washington P. PMID: 37773607; PMCID: PMC10576230.
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    21. Personalized Machine Learning using Passive Sensing and Ecological Momentary Assessments for Meth Users in Hawaii: A Research Protocol. medRxiv. 2023 Aug 25. Washington P. PMID: 37662253; PMCID: PMC10473804.
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    22. Investigating #vapingcessation in Twitter. Res Sq. 2023 Jun 05. Amin S, Jaiswal A, Washington PY, Pokhrel P. PMID: 37333241; PMCID: PMC10275054.
      View in: PubMed   Mentions:
    23. A Review of and Roadmap for Data Science and Machine Learning for the Neuropsychiatric Phenotype of Autism. Annu Rev Biomed Data Sci. 2023 Aug 10; 6:211-228. Washington P, Wall DP. PMID: 37137169; PMCID: PMC11093217.
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    24. Training and Profiling a Pediatric Facial Expression Classifier for Children on Mobile Devices: Machine Learning Study. JMIR Form Res. 2023 Mar 21; 7:e39917. Banerjee A, Mutlu OC, Kline A, Surabhi S, Washington P, Wall DP. PMID: 35962462; PMCID: PMC10131663.
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    25. Digitally Diagnosing Multiple Developmental Delays using Crowdsourcing fused with Machine Learning: A Research Protocol. medRxiv. 2023 Mar 07. Washington P. PMID: 36945467; PMCID: PMC10029023.
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    26. Session Introduction: TOWARDS ETHICAL BIOMEDICAL INFORMATICS: LEARNING FROM OLELO NOEAU, HAWAIIAN PROVERBS. Pac Symp Biocomput. 2023; 28:461-471. Washington PY, Puniwai N, Kamaka M, Gürsoy G, Tatonetti N, Brenner SE, Wall DP. PMID: 36541000; PMCID: PMC11095408.
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    27. Machine learning models using mobile game play accurately classify children with autism. Intell Based Med. 2022; 6:100057. Deveau N, Washington P, Leblanc E, Husic A, Dunlap K, Penev Y, Kline A, Mutlu OC, Wall DP. PMID: 36035501; PMCID: PMC9398788.
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    28. Causal Modeling to Mitigate Selection Bias and Unmeasured Confounding in Internet-Based Epidemiology of COVID-19: Model Development and Validation. JMIR Public Health Surveill. 2022 Jul 21; 8(7):e31306. Stockham N, Washington P, Chrisman B, Paskov K, Jung JY, Wall DP. PMID: 35605128; PMCID: PMC9307267.
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    29. The human "contaminome": bacterial, viral, and computational contamination in whole genome sequences from 1000 families. Sci Rep. 2022 Jun 14; 12(1):9863. Chrisman B, He C, Jung JY, Stockham N, Paskov K, Washington P, Wall DP. PMID: 35701436; PMCID: PMC9198055.
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    30. Classifying Autism From Crowdsourced Semistructured Speech Recordings: Machine Learning Model Comparison Study. JMIR Pediatr Parent. 2022 Apr 14; 5(2):e35406. Chi NA, Washington P, Kline A, Husic A, Hou C, He C, Dunlap K, Wall DP. PMID: 35436234; PMCID: PMC9052034.
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    31. Improved Digital Therapy for Developmental Pediatrics Using Domain-Specific Artificial Intelligence: Machine Learning Study. JMIR Pediatr Parent. 2022 Apr 08; 5(2):e26760. Washington P, Kalantarian H, Kent J, Husic A, Kline A, Leblanc E, Hou C, Mutlu OC, Dunlap K, Penev Y, Varma M, Stockham NT, Chrisman B, Paskov K, Sun MW, Jung JY, Voss C, Haber N, Wall DP. PMID: 35394438; PMCID: PMC9034430.
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    32. Crowd annotations can approximate clinical autism impressions from short home videos with privacy protections. Intell Based Med. 2022; 6:None. Washington P, Chrisman B, Leblanc E, Dunlap K, Kline A, Mutlu C, Stockham N, Paskov K, Wall DP. PMID: 35634270; PMCID: PMC9139408.
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    33. Identification of Social Engagement Indicators Associated With Autism Spectrum Disorder Using a Game-Based Mobile App: Comparative Study of Gaze Fixation and Visual Scanning Methods. J Med Internet Res. 2022 Feb 15; 24(2):e31830. Varma M, Washington P, Chrisman B, Kline A, Leblanc E, Paskov K, Stockham N, Jung JY, Sun MW, Wall DP. PMID: 35166683; PMCID: PMC8889483.
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    34. A Method for Localizing Non-Reference Sequences to the Human Genome. Pac Symp Biocomput. 2022; 27:313-324. Chrisman BS, Paskov KM, He C, Jung JY, Stockham N, Washington PY, Wall DP. PMID: 34890159; PMCID: PMC8730539.
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    35. A Mobile Game Platform for Improving Social Communication in Children with Autism: A Feasibility Study. Appl Clin Inform. 2021 Oct; 12(5):1030-1040. Penev Y, Dunlap K, Husic A, Hou C, Washington P, Leblanc E, Kline A, Kent J, Ng-Thow-Hing A, Liu B, Harjadi C, Tsou M, Desai M, Wall DP. PMID: 34788890; PMCID: PMC8598393.
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    36. A Local Community-Based Social Network for Mental Health and Well-being (Quokka): Exploratory Feasibility Study. JMIRx Med. 2021 Oct 27; 2(4):e24972. Shih C, Pudipeddi R, Uthayakumar A, Washington P. PMID: 37725541; PMCID: PMC10414255.
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    37. Improved detection of disease-associated gut microbes using 16S sequence-based biomarkers. BMC Bioinformatics. 2021 Oct 19; 22(1):509. Chrisman BS, Paskov KM, Stockham N, Jung JY, Varma M, Washington PY, Tataru C, Iwai S, DeSantis TZ, David M, Wall DP. PMID: 34666677; PMCID: PMC8527694.
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    38. Training Affective Computer Vision Models by Crowdsourcing Soft-Target Labels. Cognit Comput. 2021 Sep; 13(5):1363-1373. Washington P, Kalantarian H, Kent J, Husic A, Kline A, Leblanc E, Hou C, Mutlu C, Dunlap K, Penev Y, Stockham N, Chrisman B, Paskov K, Jung JY, Voss C, Haber N, Wall DP. PMID: 35669554; PMCID: PMC9165031.
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    39. A maximum flow-based network approach for identification of stable noncoding biomarkers associated with the multigenic neurological condition, autism. BioData Min. 2021 May 03; 14(1):28. Varma M, Paskov KM, Chrisman BS, Sun MW, Jung JY, Stockham NT, Washington PY, Wall DP. PMID: 33941233; PMCID: PMC8091705.
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    40. Estimating sequencing error rates using families. BioData Min. 2021 Apr 23; 14(1):27. Paskov K, Jung JY, Chrisman B, Stockham NT, Washington P, Varma M, Sun MW, Wall DP. PMID: 33892748; PMCID: PMC8063364.
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    41. Crowdsourced privacy-preserved feature tagging of short home videos for machine learning ASD detection. Sci Rep. 2021 Apr 07; 11(1):7620. Washington P, Tariq Q, Leblanc E, Chrisman B, Dunlap K, Kline A, Kalantarian H, Penev Y, Paskov K, Voss C, Stockham N, Varma M, Husic A, Kent J, Haber N, Winograd T, Wall DP. PMID: 33828118; PMCID: PMC8027393.
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    42. Indels in SARS-CoV-2 occur at template-switching hotspots. BioData Min. 2021 Mar 20; 14(1):20. Chrisman BS, Paskov K, Stockham N, Tabatabaei K, Jung JY, Washington P, Varma M, Sun MW, Maleki S, Wall DP. PMID: 33743803; PMCID: PMC7980745.
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    43. Selection of trustworthy crowd workers for telemedical diagnosis of pediatric autism spectrum disorder. Pac Symp Biocomput. 2021; 26:14-25. Washington P, Leblanc E, Dunlap K, Penev Y, Varma M, Jung JY, Chrisman B, Sun MW, Stockham N, Paskov KM, Kalantarian H, Voss C, Haber N, Wall DP. PMID: 33691000; PMCID: PMC7958981.
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    44. Feature replacement methods enable reliable home video analysis for machine learning detection of autism. Sci Rep. 2020 Dec 04; 10(1):21245. Leblanc E, Washington P, Varma M, Dunlap K, Penev Y, Kline A, Wall DP. PMID: 33277527; PMCID: PMC7719177.
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    45. Precision Telemedicine through Crowdsourced Machine Learning: Testing Variability of Crowd Workers for Video-Based Autism Feature Recognition. J Pers Med. 2020 Aug 13; 10(3). Washington P, Leblanc E, Dunlap K, Penev Y, Kline A, Paskov K, Sun MW, Chrisman B, Stockham N, Varma M, Voss C, Haber N, Wall DP. PMID: 32823538; PMCID: PMC7564950.
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    46. Game theoretic centrality: a novel approach to prioritize disease candidate genes by combining biological networks with the Shapley value. BMC Bioinformatics. 2020 Aug 12; 21(1):356. Sun MW, Moretti S, Paskov KM, Stockham NT, Varma M, Chrisman BS, Washington PY, Jung JY, Wall DP. PMID: 32787845; PMCID: PMC7430867.
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    47. The Performance of Emotion Classifiers for Children With Parent-Reported Autism: Quantitative Feasibility Study. JMIR Ment Health. 2020 Apr 01; 7(4):e13174. Kalantarian H, Jedoui K, Dunlap K, Schwartz J, Washington P, Husic A, Tariq Q, Ning M, Kline A, Wall DP. PMID: 32234701; PMCID: PMC7160704.
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    48. Feature Selection and Dimension Reduction of Social Autism Data. Pac Symp Biocomput. 2020; 25:707-718. Washington P, Paskov KM, Kalantarian H, Stockham N, Voss C, Kline A, Patnaik R, Chrisman B, Varma M, Tariq Q, Dunlap K, Schwartz J, Haber N, Wall DP. PMID: 31797640; PMCID: PMC6927820.
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    49. Data-Driven Diagnostics and the Potential of Mobile Artificial Intelligence for Digital Therapeutic Phenotyping in Computational Psychiatry. Biol Psychiatry Cogn Neurosci Neuroimaging. 2020 Aug; 5(8):759-769. Washington P, Park N, Srivastava P, Voss C, Kline A, Varma M, Tariq Q, Kalantarian H, Schwartz J, Patnaik R, Chrisman B, Stockham N, Paskov K, Haber N, Wall DP. PMID: 32085921; PMCID: PMC7292741.
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    50. Identification and Quantification of Gaps in Access to Autism Resources in the United States: An Infodemiological Study. J Med Internet Res. 2019 Jul 10; 21(7):e13094. Ning M, Daniels J, Schwartz J, Dunlap K, Washington P, Kalantarian H, Du M, Wall DP. PMID: 31293243; PMCID: PMC6652124.
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    51. Labeling images with facial emotion and the potential for pediatric healthcare. Artif Intell Med. 2019 Jul; 98:77-86. Kalantarian H, Jedoui K, Washington P, Tariq Q, Dunlap K, Schwartz J, Wall DP. PMID: 31521254; PMCID: PMC6855300.
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    52. Scientific Discovery Games for Biomedical Research. Annu Rev Biomed Data Sci. 2019 Jul; 2(1):253-279. Das R, Keep B, Washington P, Riedel-Kruse IH. PMID: 34308269; PMCID: PMC8297398.
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    53. Addendum to the Acknowledgements: Validity of Online Screening for Autism: Crowdsourcing Study Comparing Paid and Unpaid Diagnostic Tasks. J Med Internet Res. 2019 Jun 27; 21(6):e14950. Washington P, Kalantarian H, Tariq Q, Schwartz J, Dunlap K, Chrisman B, Varma M, Ning M, Kline A, Stockham N, Paskov K, Voss C, Haber N, Wall DP. PMID: 31250828; PMCID: PMC6620884.
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    54. Validity of Online Screening for Autism: Crowdsourcing Study Comparing Paid and Unpaid Diagnostic Tasks. J Med Internet Res. 2019 May 23; 21(5):e13668. Washington P, Kalantarian H, Tariq Q, Schwartz J, Dunlap K, Chrisman B, Varma M, Ning M, Kline A, Stockham N, Paskov K, Voss C, Haber N, Wall DP. PMID: 31124463; PMCID: PMC6552453.
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    55. Effect of Wearable Digital Intervention for Improving Socialization in Children With Autism Spectrum Disorder: A Randomized Clinical Trial. JAMA Pediatr. 2019 May 01; 173(5):446-454. Voss C, Schwartz J, Daniels J, Kline A, Haber N, Washington P, Tariq Q, Robinson TN, Desai M, Phillips JM, Feinstein C, Winograd T, Wall DP. PMID: 30907929; PMCID: PMC6503634.
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    56. Detecting Developmental Delay and Autism Through Machine Learning Models Using Home Videos of Bangladeshi Children: Development and Validation Study. J Med Internet Res. 2019 Apr 24; 21(4):e13822. Tariq Q, Fleming SL, Schwartz JN, Dunlap K, Corbin C, Washington P, Kalantarian H, Khan NZ, Darmstadt GL, Wall DP. PMID: 31017583; PMCID: PMC6505375.
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    57. Interactive programming paradigm for real-time experimentation with remote living matter. Proc Natl Acad Sci U S A. 2019 Mar 19; 116(12):5411-5419. Washington P, Samuel-Gama KG, Goyal S, Ramaswami A, Riedel-Kruse IH. PMID: 30824592; PMCID: PMC6431204.
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    58. Outgroup Machine Learning Approach Identifies Single Nucleotide Variants in Noncoding DNA Associated with Autism Spectrum Disorder. Pac Symp Biocomput. 2019; 24:260-271. Varma M, Paskov KM, Jung JY, Sierra Chrisman B, Stockham NT, Washington PY, Wall DP. PMID: 30864328; PMCID: PMC6417813.
      View in: PubMed   Mentions:
    59. Mobile detection of autism through machine learning on home video: A development and prospective validation study. PLoS Med. 2018 Nov; 15(11):e1002705. Tariq Q, Daniels J, Schwartz JN, Washington P, Kalantarian H, Wall DP. PMID: 30481180; PMCID: PMC6258501.
      View in: PubMed   Mentions:
    60. A Mobile Game for Automatic Emotion-Labeling of Images. IEEE Trans Games. 2020 Jun; 12(2):213-218. Kalantarian H, Jedoui K, Washington P, Wall DP. PMID: 32551410; PMCID: PMC7301713.
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    61. Guess What?: Towards Understanding Autism from Structured Video Using Facial Affect. J Healthc Inform Res. 2019; 3(1):43-66. Kalantarian H, Washington P, Schwartz J, Daniels J, Haber N, Wall DP. PMID: 33313475; PMCID: PMC7730314.
      View in: PubMed   Mentions:
    62. Exploratory study examining the at-home feasibility of a wearable tool for social-affective learning in children with autism. NPJ Digit Med. 2018; 1:32. Daniels J, Schwartz JN, Voss C, Haber N, Fazel A, Kline A, Washington P, Feinstein C, Winograd T, Wall DP. PMID: 31304314; PMCID: PMC6550272.
      View in: PubMed   Mentions:
    63. Feasibility Testing of a Wearable Behavioral Aid for Social Learning in Children with Autism. Appl Clin Inform. 2018 Jan; 9(1):129-140. Daniels J, Haber N, Voss C, Schwartz J, Tamura S, Fazel A, Kline A, Washington P, Phillips J, Winograd T, Feinstein C, Wall DP. PMID: 29466819; PMCID: PMC5821509.
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    64. Palliative and end-of-life care in the African American community. JAMA. 2000 Nov 15; 284(19):2518-21. Crawley L, Payne R, Bolden J, Payne T, Washington P, Williams S, Initiative to Improve Palliative and End-of-Life Care in the African American Community. PMID: 11074786.
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