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Emily Lydon, MD

Title(s)Clinical Fellow, Medicine
SchoolSchool of Medicine
Address513 Parnassus Avenue, HSE, #S380
San Francisco CA 94143
PronounsShe/Her/Hers
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Host-Microbe Multiomic Profiling Predicts Mortality in Sepsis. Am J Respir Crit Care Med. 2025 Aug 11. Spottiswoode N, Neyton LP, Mick E, Kalantar KL, Hao S, Lydon EC, Narendra R, Serpa PH, Caldera S, Gomez A, Hendrickson C, Kangelaris K, Liu KD, Sinha P, DeRisi JL, Matthay MA, Calfee CS, Langelier CR. PMID: 40788839.
      View in: PubMed   Mentions:    Fields:    
    2. A Systematic Review of Health-Related Quality-of-Life Measurement in Patients With Acute Bacterial Skin and Skin Structure Infections. Clin Infect Dis. 2025 Aug 06; 81(Supplement_1):S24-S31. Sutton KN, Lydon E, Rader A, Barton KD, Skalla LA, Wang TW, Ruffin F, Oakes M, Miller J, Collyar D, Boucher HW, Doernberg SB, King HA. PMID: 40794661; PMCID: PMC12341922.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    3. Epigenetic attenuation of interferon signaling is associated with aging-related improvements in systemic lupus erythematosus. Sci Transl Med. 2025 Jun 25; 17(804):eadt5550. Narendra R, Van Phan H, Patterson SL, Almonte-Loya A, Lydon EC, Lanata C, Love C, Park J, Shimoda M, Barcellos L, Mekonen H, Detweiler A, Deosthale P, Neff N, Criswell LA, Maliskova L, Eckalbar W, Fragiadakis GK, Yazdany J, Dall'Era M, Katz P, Ye CJ, Sirota M, Langelier CR. PMID: 40561001.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    4. Empiric Azithromycin in COVID-19 Impacts the Respiratory Microbiome and Antimicrobial Resistome without Anti-inflammatory Benefit. Res Sq. 2025 Jun 20. Langelier C, Glascock A, Maguire C, Van Phan H, Lydon E, Calfee C, Corry D, Kheradmand F, Baden L, Sekaly RP, McComsey G, Haddad E, Cairns C, Pulendran B, Fernandez-Sesma A, Simon V, Metcalf J, Higuita N, Messer W, Davis M, Nadeau KC, Kraft M, Bime C, Schaenman J, Erle D, Atkinson M, Ehrlich LIR, Melamed E, Montgomery R, Shaw A, Hough C, Geng L, Hoch A, Hafler D, Augustine A, Becker P, Peters B, Ozonoff A, Kim-Schulze S, Krammer F, Bosinger S, Eckalbar W, Altman M, Wilson M, Guan L, Maecker H, Steen H, Diray-Arce J, Rouphael N, Kleinstein S, Reed E, Levy O, Chu V. PMID: 40585204; PMCID: PMC12204364.
      View in: PubMed   Mentions:
    5. Minimalistic Transcriptomic Signatures Permit Accurate Early Prediction of COVID-19 Mortality. medRxiv. 2025 May 19. Narendra R, Lydon EC, Van Phan H, Spottiswoode N, Neyton LP, Diray-Arce J, IMPACC Network, COMET Consortium, EARLI Consortium, Becker PM, Kim-Schulze S, Hoch A, Pickering H, van Zalm P, Cairns CB, Altman MC, Augustine AD, Bosinger S, Eckalbar W, Guan L, Jayavelu ND, Kleinstein SH, Krammer F, Maecker HT, Ozonoff A, Peters B, Rouphael N, Montgomery RR, Reed E, Schaenman J, Steen H, Levy O, Carillo SA, Erle D, Hendrickson CM, Krummel MF, Matthay MA, Woodruff P, Haddad EK, Calfee CS, Langelier CR. PMID: 40475132; PMCID: PMC12140511.
      View in: PubMed   Mentions:
    6. Integrating a host transcriptomic biomarker with a large language model for diagnosis of lower respiratory tract infection. medRxiv. 2025 Apr 03. Van Phan H, Spottiswoode N, Lydon EC, Chu VT, Cuesta A, Kazberouk AD, Richmond NL, Deosthale P, Calfee CS, Langelier CR. PMID: 40236397; PMCID: PMC11998817.
      View in: PubMed   Mentions:
    7. Epigenetic attenuation of interferon signaling drives aging-related improvements in systemic lupus. medRxiv. 2025 Jan 28. Narendra R, Phan HV, Patterson SL, Almonte Loya AL, Lanata C, Love C, Park J, Lydon EC, Shimoda MA, Barcellos L, Mekonen H, Detweiler A, Deosthale P, Neff N, Criswell LA, Maliskova L, Eckalbar W, Fragiadakis G, Yazdany J, Dall'Era M, Katz P, Ye CJ, Sirota M, Langelier CR. PMID: 39974140; PMCID: PMC11838985.
      View in: PubMed   Mentions:
    8. Pulmonary FABP4 Is an Inverse Biomarker of Pneumonia in Critically Ill Children and Adults. Am J Respir Crit Care Med. 2024 Dec 15; 210(12):1480-1483. Lydon EC, Phan HV, Mick E, Spottiswoode N, Calfee CS, Mourani PM, Langelier CR. PMID: 39312201; PMCID: PMC12392757.
      View in: PubMed   Mentions:    Fields:    
    9. Proteomic profiling of the local and systemic immune response to pediatric respiratory viral infections. mSystems. 2025 Jan 21; 10(1):e0133524. Lydon E, Osborne CM, Wagner BD, Ambroggio L, Harris JK, Reeder R, Carpenter TC, Maddux AB, Leroue MK, Yehya N, DeRisi JL, Hall MW, Zuppa AF, Carcillo J, Meert K, Sapru A, Pollack MM, McQuillen P, Notterman DA, Langelier CR, Mourani PM, Eunice Kennedy Shriver National Institute of Child Health and Human Development Collaborative Pediat. PMID: 39611811; PMCID: PMC11748518.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    10. Fungal lung disease. Eur Respir J. 2024 Nov; 64(5). Jaggi TK, Agarwal R, Tiew PY, Shah A, Lydon EC, Hage CA, Waterer GW, Langelier CR, Delhaes L, Chotirmall SH. PMID: 39362667; PMCID: PMC11602666.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimals
    11. Proteomic profiling of the local and systemic immune response to pediatric respiratory viral infections. bioRxiv. 2024 Oct 10. Lydon E, Osborne CM, Wagner BD, Ambroggio L, Kirk Harris J, Reeder R, Carpenter TC, Maddux AB, Leroue MK, Yehya N, DeRisi JL, Hall MW, Zuppa AF, Carcillo J, Meert K, Sapru A, Pollack MM, McQuillen P, Notterman DA, Langelier CR, Mourani PM, Eunice Kennedy Shriver National Institute of Child Health and Human Development Collaborative Pediat. PMID: 39416167; PMCID: PMC11482837.
      View in: PubMed   Mentions:
    12. Respiratory Metagenomics: Ready for Prime Time? Am J Respir Crit Care Med. 2024 01 15; 209(2):124-126. Lydon E, Langelier CR. PMID: 38029295; PMCID: PMC10806427.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    13. Utilizing Inpatient Admissions to Increase HIV Screening During the COVID-19 Pandemic and Beyond. Am J Med Qual. 2023 Jan-Feb 01; 38(1):66-67. Garcia-Grossman I, Hauser K, Adamo M, Flynn S, Burbank S, Crawford C, Davis J, Lydon E, Reed G, Kochanska M, Guzman K. PMID: 36519964; PMCID: PMC9797120.
      View in: PubMed   Mentions:    Fields:    Translation:HumansPHPublic Health
    14. Discriminating Bacterial and Viral Infection Using a Rapid Host Gene Expression Test. Crit Care Med. 2021 10 01; 49(10):1651-1663. Tsalik EL, Henao R, Montgomery JL, Nawrocki JW, Aydin M, Lydon EC, Ko ER, Petzold E, Nicholson BP, Cairns CB, Glickman SW, Quackenbush E, Kingsmore SF, Jaehne AK, Rivers EP, Langley RJ, Fowler VG, McClain MT, Crisp RJ, Ginsburg GS, Burke TW, Hemmert AC, Woods CW, Antibacterial Resistance Leadership Group. PMID: 33938716; PMCID: PMC8448917.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansCells
    15. Endogenous Candida endophthalmitis: Who is really at risk? J Infect. 2021 02; 82(2):276-281. Seidelman J, Fleece M, Bloom A, Lydon E, Yang W, Arnold C, Weber DJ, Okeke NL. PMID: 33412206.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansAnimals
    16. Validation of a host response test to distinguish bacterial and viral respiratory infection. EBioMedicine. 2019 Oct; 48:453-461. Lydon EC, Henao R, Burke TW, Aydin M, Nicholson BP, Glickman SW, Fowler VG, Quackenbush EB, Cairns CB, Kingsmore SF, Jaehne AK, Rivers EP, Langley RJ, Petzold E, Ko ER, McClain MT, Ginsburg GS, Woods CW, Tsalik EL. PMID: 31631046; PMCID: PMC6838360.
      View in: PubMed   Mentions: 30     Fields:    Translation:Humans
    17. A host gene expression approach for identifying triggers of asthma exacerbations. PLoS One. 2019; 14(4):e0214871. Lydon EC, Bullard C, Aydin M, Better OM, Mazur A, Nicholson BP, Ko ER, McClain MT, Ginsburg GS, Woods CW, Burke TW, Henao R, Tsalik EL. PMID: 30958855; PMCID: PMC6453459.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    18. The host response as a tool for infectious disease diagnosis and management. Expert Rev Mol Diagn. 2018 08; 18(8):723-738. Lydon EC, Ko ER, Tsalik EL. PMID: 29939801.
      View in: PubMed   Mentions: 10     Fields:    Translation:Humans
    19. The prevalence of undiagnosed pre-surgical cognitive impairment and its post-surgical clinical impact in elderly patients undergoing surgery for adult spinal deformity. J Spine Surg. 2017 Sep; 3(3):358-363. Adogwa O, Elsamadicy AA, Lydon E, Vuong VD, Cheng J, Karikari IO, Bagley CA. PMID: 29057343; PMCID: PMC5637212.
      View in: PubMed   Mentions: 11  
    20. Depression as an independent predictor of postoperative delirium in spine deformity patients undergoing elective spine surgery. J Neurosurg Spine. 2017 Aug; 27(2):209-214. Elsamadicy AA, Adogwa O, Lydon E, Sergesketter A, Kaakati R, Mehta AI, Vasquez RA, Cheng J, Bagley CA, Karikari IO. PMID: 28574333.
      View in: PubMed   Mentions: 35     Fields:    Translation:Humans
    21. Increased 30-Day Complication Rates Associated with Laminectomy in 874 Adult Patients with Spinal Deformity Undergoing Elective Spinal Fusion: A Single Institutional Study. World Neurosurg. 2017 Jun; 102:370-375. Elsamadicy AA, Adogwa O, Warwick H, Sergesketter A, Lydon E, Shammas RL, Mehta AI, Vasquez RA, Cheng J, Bagley CA, Karikari IO. PMID: 28359921.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
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