Daniel Hogan • UCSF Profiles

Daniel Hogan, PhD

Title(s)	BIOINFORMATICS PROGR 4, Bioengineering
School	School of Pharmacy
Phone	--
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Bibliographic

Publications

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.

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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.

Uncovering Protein Ensembles: Automated Multiconformer Model Building for X-ray Crystallography and Cryo-EM. bioRxiv. 2023 Jun 29. Wankowicz SA, Ravikumar A, Sharma S, Riley BT, Raju A, Hogan DW, van den Bedem H, Keedy DA, Fraser JS. PMID: 37425870; PMCID: PMC10327213.

View in: PubMed Mentions:
Author Reply to "Regarding 'No Difference in Complication Rates or Patient-Reported Outcomes Between Bone-Patellar Tendon-Bone and Quadriceps Tendon Autograft for Anterior Cruciate Ligament Reconstruction"'. Arthroscopy. 2022 06; 38(6):1761-1763. Hogan DW, Burch MB, Rund JM, Geeslin DW, Ma R, Gray AF, Chu CR, Ray TE, Pullen WM, Sherman SL. PMID: 35660173.

View in: PubMed Mentions: Fields:
Ort Orthopedics
Ligand binding remodels protein side-chain conformational heterogeneity. Elife. 2022 03 21; 11. Wankowicz SA, de Oliveira SH, Hogan DW, van den Bedem H, Fraser JS. PMID: 35312477; PMCID: PMC9084896.

View in: PubMed Mentions: 18 Fields:
Bio Biology
Translation:Cells
No Difference in Complication Rates or Patient-Reported Outcomes Between Bone-Patella Tendon-Bone and Quadriceps Tendon Autograft for Anterior Cruciate Ligament Reconstruction. Arthrosc Sports Med Rehabil. 2022 Apr; 4(2):e417-e424. Hogan DW, Burch MB, Rund JM, Geeslin DW, Ma R, Gray AF, Chu CR, Ray TE, Pullen WM, Sherman SL. PMID: 35494262; PMCID: PMC9042747.

View in: PubMed Mentions: 6
qFit 3: Protein and ligand multiconformer modeling for X-ray crystallographic and single-particle cryo-EM density maps. Protein Sci. 2021 01; 30(1):270-285. Riley BT, Wankowicz SA, de Oliveira SHP, van Zundert GCP, Hogan DW, Fraser JS, Keedy DA, van den Bedem H. PMID: 33210433; PMCID: PMC7737783.

View in: PubMed Mentions: 19 Fields:
Bio Biochemistry
Intraflagellar transport velocity is governed by the number of active KIF17 and KIF3AB motors and their motility properties under load. Proc Natl Acad Sci U S A. 2017 08 15; 114(33):E6830-E6838. Milic B, Andreasson JOL, Hogan DW, Block SM. PMID: 28761002; PMCID: PMC5565462.

View in: PubMed Mentions: 26 Fields:
Sci Science
Translation:Humans Animals Cells
Observation of long-range tertiary interactions during ligand binding by the TPP riboswitch aptamer. Elife. 2015 Dec 28; 4. Duesterberg VK, Fischer-Hwang IT, Perez CF, Hogan DW, Block SM. PMID: 26709838; PMCID: PMC4775224.

View in: PubMed Mentions: 16 Fields:
Bio Biology
Translation:Cells
Traumatic carotid-rosenthal fistula treated with Jostent Graftmaster. World J Radiol. 2014 Dec 28; 6(12):924-7. Allam H, Callison RC, Scodary D, Alawi A, Hogan DW, Alshekhlee A. PMID: 25550998; PMCID: PMC4278154.

View in: PubMed Mentions: 1
Observations of Dicke narrowing and speed dependence in air-broadened CO₂ lineshapes near 2.06 μm. J Chem Phys. 2014 Nov 07; 141(17):174301. Bui TQ, Long DA, Cygan A, Sironneau VT, Hogan DW, Rupasinghe PM, Ciurylo R, Lisak D, Okumura M. PMID: 25381508.

View in: PubMed Mentions: 3 Fields:
Bio Biophysics Che Chemistry Phy Physics