Rupsa Bhattacharjee, PhD

Title(s)Associate Specialist, Radiology
SchoolSchool of Medicine
Address1700 4th Street, #201
San Francisco CA 94158
Emailrupsa.bhattacharjee@ucsf.edu
ORCID ORCID Icon0000-0001-9893-3527 Additional info
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    Collapse Biography 
    Collapse Education and Training
    Indian Institute of Technology (IIT), Delhi , New Delhi, IndiaPhD10/2021Biomedical Engineering
    Jadavpur University, IndiaM.E.06/2013Biomedical Engineering
    University of Kalyani, IndiaB.Tech07/2011Electronics & Instrumentation Engineering
    Collapse Awards and Honors
    Philips Healthcare, Netherlands2019  - 2020Best “MRI Clinical Application Specialist” : Silver Medal
    International Society of Magnetic Resonance Imaging in Medicine2019Suma cum Laude Award for Abstract:ISMRM 2019, Montreal, Canada
    International Society of Magnetic Resonance Imaging in Medicine2019Magna cum Laude Awardfor Abstract:ISMRM 2019, Montreal, Canada
    International Society of Magnetic Resonance Imaging in Medicine2019Educational Travel Stipend Award: ISMRM 2019, Montreal, Canada
    International Society of Magnetic Resonance Imaging in Medicine2018Educational Travel Stipend Award, ISMRM 2018, Paris, France
    Philips Health System recognitions2015“YCC: Your contribution counts”
    Philips Health System recognitions2014“YCC: Your contribution counts”
    International Society of Magnetic Resonance Imaging in Medicine2023Three Suma cum Laude Awards for Abstract:ISMRM 2023, Toronto, Canada
    International Society of Magnetic Resonance Imaging in Medicine2024Magna cum Laude Awards for Abstract:ISMRM 2024, Singapore
    International Society of Magnetic Resonance Imaging in Medicine2024Junior Fellow Award

    Collapse Overview 
    Collapse Overview
    Rupsa Bhattacharjee, PhD is a Post-Doctoral Associate Specialist in the Radiology and Biomedical Imaging Department.She is a medical imaging and image processing researcher with a primary interest in developing algorithms for to improve the utility of MRI imaging as diagnostic and prognostic tool. She obtained her doctoral degree in Biomedical Engineering working on Susceptibility weighted MR imaging (SWI) in human subjects with tumors and acute ischemic stroke. After graduation, in 2021, she joined the Musculoskeletal and Imaging Research Group at UCSF as post-doctoral fellow to study joint diseases with compositional MRI techniques combined with machine learning tools.


    In her current role, she is specifically focused on exploring the role of MRI, PET, and machine learning algorithms to extract imaging biomarkers of several musculoskeletal conditions such as knee and hip osteoarthritis. Her primary project involvements are in, but not limited to:
    1) Simultaneous Imaging of Tissue Biochemistry and Metabolism (PET-MRI) associated with Biomechanics in Patella Femoral Joint Osteoarthritis
    2) Understanding the complex pathophysiology of joint degeneration, knee and hip joint interactions, impact of gait biomechanics, are all critical to determine the mechanistic basis of hip OA.
    3) Ultra-Fast Knee MRI with Deep Learning

    She has worked as MRI Application Specialist in Philips Healthcare for 8 years, closely with various healthcare facilities to set up and optimize MRI scan acquisition parameters according to curtailed needs (1.5T & 3.0T). During her years in industry, she has partnered with Clinical scientists to jointly run MRI projects on test and trial basis in India market Philips MRI collaborative research centers. [New product introduction and First-of-kind trials: Compressed SENSE, Amide Proton Transfer, Ultra-short TE, Multi-Nuclei Spectroscopy, Spiral acquisition, Quantitative Susceptibility Mapping, IVIM, Elastography etc.] She has been an active part of Philips India AI-ambassadors team for AI based knowledge sharing and educational, collaborative approaches.

    Collapse Research 
    Collapse Research Activities and Funding
    Comparison of in-vitro Assessment of metal artifacts in a porcine model at 0.55 and 3Tesla
    UCSF UCSF-Siemens Seed Grant for Pilot ProjectsSep 23, 2022 - Sep 23, 2023
    Role: Co-investigator
    Evaluating associations between Knee biomarkersand Thigh muscle intramuscular fat behaviorin Low-field (0.55T) quantitative MRI: a comparison study with 3.0T in healthy controls vs Hip OA patients
    UCSF UCSF-Siemens Seed Grant for Pilot ProjectsSep 23, 2022 - Sep 23, 2023
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
    Newest   |   Oldest   |   Most Cited   |   Most Discussed   |   Timeline   |   Field Summary   |   Plain Text
    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Association of cartilage T1? and T2 relaxation time measurement with hip osteoarthritis progression: A 5-year longitudinal study using voxel-based relaxometry and Z-score normalization. Osteoarthr Cartil Open. 2024 Dec; 6(4):100538. Thahakoya R, Roach KE, Han M, Bhattacharjee R, Jiang F, Luitjens J, Bahroos E, Pedoia V, Souza RB, Majumdar S. PMID: 39554476; PMCID: PMC11566348.
      View in: PubMed   Mentions:
    2. Improved metal suppression using new generation low-field MRI: a biophantom feasibility study. Skeletal Radiol. 2024 Oct 04. Luitjens J, Ziegeler K, Yoon D, Gassert F, Bhattacharjee R, Manatrakul R, Ngarmsrikam C, Becker A, Yang Y, Joseph GB, Su P, Itriago-Leon P, Majumdar S, Link TM. PMID: 39365346.
      View in: PubMed   Mentions:    Fields:    
    3. The relationships between patellofemoral bone remodeling, cartilage composition, and vertical loading rate: PET/MRI in isolated patellofemoral osteoarthritis. Osteoarthritis Cartilage. 2024 Dec; 32(12):1591-1600. Bhattacharjee R, Hammond E, Chotigar N, Akkaya Z, Jiang F, Bahroos E, Han M, Behr S, Bucknor MD, Souza RB, Pedoia V, Majumdar S. PMID: 39277026.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    4. Artificial intelligence in musculoskeletal applications: a primer for radiologists. Diagn Interv Radiol. 2024 Aug 19. Tong MW, Zhou J, Akkaya Z, Majumdar S, Bhattacharjee R. PMID: 39157958.
      View in: PubMed   Mentions:    Fields:    
    5. Biomarkers of Cartilage Composition. Semin Musculoskelet Radiol. 2024 Feb; 28(1):26-38. Löffler MT, Akkaya Z, Bhattacharjee R, Link TM. PMID: 38330968.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    6. Is hip capsule morphology associated with hip pain in patients without another structural correlate? Eur Radiol. 2024 Jul; 34(7):4321-4330. Luitjens J, Gassert FG, Patwardhan V, Bhattacharjee R, Joseph GB, Zhang AL, Souza RB, Majumdar S, Link TM. PMID: 38170264; PMCID: PMC11213662.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    7. Synthetic Knee MRI T1p Maps as an Avenue for Clinical Translation of Quantitative Osteoarthritis Biomarkers. Bioengineering (Basel). 2023 Dec 24; 11(1). Tong MW, Tolpadi AA, Bhattacharjee R, Han M, Majumdar S, Pedoia V. PMID: 38247894; PMCID: PMC10812962.
      View in: PubMed   Mentions: 1  
    8. Multiparametric MRI of Knees in Collegiate Basketball Players: Associations With Morphological Abnormalities and Functional Deficits. Orthop J Sports Med. 2023 Dec; 11(12):23259671231216490. Nosrat C, Gao KT, Bhattacharjee R, Pedoia V, Koff MF, Gold GE, Potter HG, Majumdar S. PMID: 38107843; PMCID: PMC10722938.
      View in: PubMed   Mentions:
    9. Technical Note: Feasibility of translating 3.0T-trained Deep-Learning Segmentation Models Out-of-the-Box on Low-Field MRI 0.55T Knee-MRI of Healthy Controls. Arxiv >Computer Science > Computer Vision and Pattern Recognition arXiv>cs>arXiv:2310.17152. 2023. Rupsa Bhattacharjee, Zehra Akkaya, Johanna Luitjens, Pan Su, Yang Yang, Valentina Pedoia, Sharmila Majumdar. View Publication.
    10. Effects of T1p Characteristics of Load-Bearing Hip Cartilage on Bilateral Knee Patellar Cartilage Subregions: Subjects With None to Moderate Radiographic Hip Osteoarthritis. J Magn Reson Imaging. 2024 Jul; 60(1):186-202. Bhattacharjee R, Thahakoya R, Luitjens J, Han M, Roach KE, Jiang F, Souza RB, Pedoia V, Majumdar S. PMID: 37702305; PMCID: PMC11283756.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    11. K2S Challenge: From Undersampled K-Space to Automatic Segmentation. Bioengineering (Basel). 2023 Feb 18; 10(2). Tolpadi AA, Bharadwaj U, Gao KT, Bhattacharjee R, Gassert FG, Luitjens J, Giesler P, Morshuis JN, Fischer P, Hein M, Baumgartner CF, Razumov A, Dylov D, Lohuizen QV, Fransen SJ, Zhang X, Tibrewala R, de Moura HL, Liu K, Zibetti MVW, Regatte R, Majumdar S, Pedoia V. PMID: 36829761; PMCID: PMC9952400.
      View in: PubMed   Mentions: 5  
    12. Quantification of Radiomics features of Peritumoral Vasogenic Edema extracted from fluid-attenuated inversion recovery images in glioblastoma and isolated brain metastasis, using T1-dynamic contrast-enhanced Perfusion analysis. NMR Biomed. 2023 05; 36(5):e4884. Parvaze PS, Bhattacharjee R, Verma YK, Singh RK, Yadav V, Singh A, Khanna G, Ahlawat S, Trivedi R, Patir R, Vaishya S, Shah TJ, Gupta RK. PMID: 36453877.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    13. Radiomics-based evaluation and possible characterization of dynamic contrast enhanced (DCE) perfusion derived different sub-regions of Glioblastoma. Eur J Radiol. 2023 Feb; 159:110655. Bhattacharjee R, Singh A, Ahlawat S, Patir R, Vaishya S, Shah TJ, Gupta RK. PMID: 36577183.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    14. Role of intra-tumoral vasculature imaging features on susceptibility weighted imaging in differentiating primary central nervous system lymphoma from glioblastoma: a multiparametric comparison with pathological validation. Neuroradiology. 2022 Sep; 64(9):1801-1818. Bhattacharjee R, Gupta M, Singh T, Sharma S, Khanna G, Parvaze SP, Patir R, Vaishya S, Ahlawat S, Singh A, Gupta RK. PMID: 35435463.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    15. Penumbra quantification from MR SWI-DWI mismatch and its comparison with MR ASL PWI-DWI mismatch in patients with acute ischemic stroke. NMR Biomed. 2021 07; 34(7):e4526. Bhattacharjee R, Gupta RK, Das B, Dixit VK, Gupta P, Singh A. PMID: 33880799.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    16. Differentiating hemorrhage and vasculature ITSS in SWI-magnitude images in intracranial Glioma: machine-learning and radiomic based approach. Proceedings of International Society of Magnetic Resonance Imaging in Medicine. 2021; 2021(29):3250. Bhattacharjee R, Gupta RK, Parvaze SP, Patir R, Vaishya S, Ahlawat S, Singh A.
    17. Evaluating the role of T2-weighted-imaging in acute ischemic stroke to accelerate routine Stroke-MRI protocol. Proceedings of International Society of Magnetic Resonance Imaging in Medicine. 2021; 2021(29):3813. Dhawan S, Afshan I, Bhattacharjee R, Saha I.
    18. 2D Texture Analysis based approach for detection of Osteoporosis on 1.5T on T1-weighted MR images. Proceedings of International Society of Magnetic Resonance Imaging in Medicine. 2021; 2021(29):0524. Krishnan P, Shah TJ, Godkhindi A, Bhattacharjee R, Pichai SK, Krishnan A, Dave B, Saha I.
    19. Evaluating feasibility of high resolution T1-perfusion MRI with whole brain coverage using compressed SENSE: Application to glioma grading. Eur J Radiol. 2020 Aug; 129:109049. Sasi S D, Ramaniharan AK, Bhattacharjee R, Gupta RK, Saha I, Van Cauteren M, Shah T, Gopalakrishnan K, Gupta A, Singh A. PMID: 32464580.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    20. Differentiating lymphoma from grade-IV glioma using susceptibility weighted imaging based texture feature at 3T MRI. Proceedings of International Society of Magnetic Resonance Imaging in Medicine. 2020; 2020(28):1694. Bhattacharjee R, Gupta RK, Patir R, Vaishya S, Ahlawat S, Singh A.
    21. Penumbra Quantification from SWI visible Prominent Veins and its comparison with ASL-derived penumbra in patients with acute stroke. Proceedings of International Society of Magnetic Resonance Imaging in Medicine. 2020; 2020(28):1788. Bhattacharjee R, Gupta RK, Dixit VK, Gupta P, Singh A.
    22. Evaluation of Gall Bladder Stones Using Susceptibility Weighted Imaging. J Comput Assist Tomogr. 2019 Sep/Oct; 43(5):747-754. Gupta RK, Neelavalli J, Gupta M, Ramaniharan AK, Sinha BK, Kriplani AK, Saini J, Verma RK, Verma MK, Bhattacharjee R, Saha I. PMID: 31356527.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    23. Quantitative vs. semiquantitative assessment of intratumoral susceptibility signals in patients with different grades of glioma. J Magn Reson Imaging. 2020 01; 51(1):225-233. Bhattacharjee R, Gupta RK, Patir R, Vaishya S, Ahlawat S, Singh A. PMID: 31087724.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    24. To Evaluate Effect of SENSE and CSENSE on Quantitative T1 and T2 mapping of Human Brain. Proceedings of International Society of Magnetic Resonance Imaging in Medicine. 2019; 2019(27):4414. Sasi D, Singh A, Bhattacharjee R, Debnath A, Thakran S, Gupta RK, Saha I, Van MC.
    25. Quantitative intra-tumoral susceptibility-signal (ITSS) vasculature volume (IVV) using QSM vs R2* approach for Glioma Grading. Proceedings of International Society of Magnetic Resonance Imaging in Medicine. 2019; 2019(27):0399. Bhattacharjee R, Neelavalli J, Gupta M, Thakran S, Sasi D, Gupta RK, Singh A.
    26. Comprehensive stroke protocol of less than six minutes: using Compressed-SENSE with valued addition of SWIp and Non-Contrast-3D-MRA. Proceedings of International Society of Magnetic Resonance Imaging in Medicine. 2019; 2019(27):1188. Bhattacharjee R, Raj RK, Verma RK, Gupta RK, Singh A .
    27. Grading of glioma using a machine learning framework based on optimized features obtained from quantitative DCE-MRI and SWI. Proceedings of International Society of Magnetic Resonance Imaging in Medicine. 2019; 2019(27):3071. Kar B, Sengupta A, Bhattacharjee R, Vats N, Yadav V, Sasi D, Gupta RK, Singh A.
    28. R2-Star & DCE-Perfusion MRI based Novel Approach for Classification of Intra Tumoral Susceptibility Signal (ITSS) into Haemorrhage, Non-Leaky Vessels and Leaky Vessels in Glioblastoma. Proceedings of International Society of Magnetic Resonance Imaging in Medicine. 2018; 2018(26):5030. Singh A, Bhattacharjee R, Budania P, Gupta PK, Gupta RK, Ahlawat S.
    29. Quantitative Micro-Vasculature Volume Assessment of Intra Tumoral Susceptibility Signal (ITSS) in differentiating Grade-III from IV glioma. Proceedings of International Society of Magnetic Resonance Imaging in Medicine. 2018; 2018(26):3420. Bhattacharjee R, Budania P, Gupta PK, Gupta RK, Ahlawat S, Singh A.
    30. Comparison of Signal intensity measures with absolute T1 value quantification in patients undergoing serial follow up imaging in patients with neurocysticercosis. Proceedings of International Society of Magnetic Resonance Imaging in Medicine. 2016; 2016(24). Gupta PK, Sahoo P, Singh AK, Garg RK, Bhattacharjee R, Gupta RK.
    31. Dynamic Contrast Enhanced perfusion MRI in pediatric brain tumors. Proceedings of International Society of Magnetic Resonance Imaging in Medicine. 2016; 2016(24). Bhattacharjee R, Sahoo P, Gupta PK, Gupta RK.
    32. Brain Tumor Detection from MR Images: Image Processing, Slicing and PCA Based Reconstruction. Proceedings published by IEEE, Computer Society of India.ISBN 978-1-4673-1825-9, IEEE Catalog Number.- CFP1272M-PRT. 2012; 97-101. Bhattacharjee R, Chakraborty M.
    33. Exudates, Retinal and Statistical Features Detection from Diabetic Retinopathy and Normal Fundus Images : An Automated Comparative Approach. Proceedings published by IEEE.ISBN 978-1-4673-2837-1, IEEE Catalog Number CFP1214T-PRT. 2012; 266-271. Bhattacharjee R, Chakraborty M.
    34. LPG-PCA Algorithm and Selective Thresholding based Automated Method:ALL & AML Blast Cells Detection and Counting. Proceedings published by IEEE. ISBN 978-1-4673-4698-6, IEEE Catalog Number.- CFP1207U-CDR. 2012. Bhattacharjee R, Chakraborty M.
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