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Pennan Barry, MD

TitleAssistant Clinical Professor
SchoolUCSF School of Medicine
DepartmentMedicine
Address550 16th. Street
San Francisco CA 94158
Phone510-620-3041
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Oh P, Pascopella L, Barry P, Flood JM. A systematic synthesis of direct costs to treat and manage tuberculosis disease applied to California, 2015. BMC Res Notes. 2017 Aug 30; 10(1):434. PMID: 28854957.
      View in: PubMed
    2. Kay A, Barry P, Annambhotla P, Greene C, Cilnis M, Chin-Hong P, Arger N, McNitt L, Neidlinger N, Shah N, Basavaraju SV, Kuehnert M, Shaw T. Solid Organ Transplant-Transmitted Tuberculosis Linked to a Community Outbreak - California, 2015. MMWR Morb Mortal Wkly Rep. 2017 Aug 04; 66(30):801-805. PMID: 28771459.
      View in: PubMed
    3. McDaniel CJ, Chitnis AS, Barry P, Shah N. Tuberculosis trends in California correctional facilities, 1993-2013. Int J Tuberc Lung Dis. 2017 Aug 01; 21(8):922-929. PMID: 28786801.
      View in: PubMed
    4. Smith SE, Pratt R, Trieu L, Barry P, Thai DT, Ahuja SD, Shah S. Epidemiology of pediatric multidrug-resistant tuberculosis in the United States, 1993-2014. Clin Infect Dis. 2017 Jun 19. PMID: 28633501.
      View in: PubMed
    5. Lowenthal P, Barry P, Flood J. Re: "Prebiologic Therapy Tuberculosis Screening Experience in a Pediatric Rheumatology Center: TST and IGRA Are Both Necessary". Pediatr Infect Dis J. 2017 Apr; 36(4):441. PMID: 28288086.
      View in: PubMed
    6. Peralta G, Barry P, Pascopella L. Use of Nucleic Acid Amplification Tests in Tuberculosis Patients in California, 2010-2013. Open Forum Infect Dis. 2016 Oct; 3(4):ofw230. PMID: 27957506.
      View in: PubMed
    7. Nahid P, Dorman SE, Alipanah N, Barry P, Brozek JL, Cattamanchi A, Chaisson LH, Chaisson RE, Daley CL, Grzemska M, Higashi JM, Ho CS, Hopewell PC, Keshavjee SA, Lienhardt C, Menzies R, Merrifield C, Narita M, O'Brien R, Peloquin CA, Raftery A, Saukkonen J, Schaaf HS, Sotgiu G, Starke JR, Migliori GB, Vernon A. Executive Summary: Official American Thoracic Society/Centers for Disease Control and Prevention/Infectious Diseases Society of America Clinical Practice Guidelines: Treatment of Drug-Susceptible Tuberculosis. Clin Infect Dis. 2016 Oct 01; 63(7):853-67. PMID: 27621353.
      View in: PubMed
    8. Shah NS, Grace Lin SY, Barry P, Cheng YN, Schecter G, Desmond E. Clinical Impact on Tuberculosis Treatment Outcomes of Discordance Between Molecular and Growth-Based Assays for Rifampin Resistance, California 2003-2013. Open Forum Infect Dis. 2016 Sep; 3(3):ofw150. PMID: 27704008.
      View in: PubMed
    9. Nahid P, Dorman SE, Alipanah N, Barry P, Brozek JL, Cattamanchi A, Chaisson LH, Chaisson RE, Daley CL, Grzemska M, Higashi JM, Ho CS, Hopewell PC, Keshavjee SA, Lienhardt C, Menzies R, Merrifield C, Narita M, O'Brien R, Peloquin CA, Raftery A, Saukkonen J, Schaaf HS, Sotgiu G, Starke JR, Migliori GB, Vernon A, et al. Official American Thoracic Society/Centers for Disease Control and Prevention/Infectious Diseases Society of America Clinical Practice Guidelines: Treatment of Drug-Susceptible Tuberculosis. Clin Infect Dis. 2016 Oct 01; 63(7):e147-e195. PMID: 27516382.
      View in: PubMed
    10. Barry P, Kay AW, Flood JM, Watt J. Getting to Zero: Tuberculosis Elimination in California. Curr Epidemiol Rep. 2016; 3:136-144. PMID: 27218013.
      View in: PubMed
    11. Lowenthal P, Barry P, Flood J. High Discordance Between Pre-US and Post-US Entry Tuberculosis Test Results Among Immigrant Children: Is it Time to Adopt Interferon Gamma Release Assay for Preentry Tuberculosis Screening? Pediatr Infect Dis J. 2016 Mar; 35(3):231-6. PMID: 26646547.
      View in: PubMed
    12. Qin F, Barry P, Pascopella L. Factors associated with extended treatment among tuberculosis patients at risk of relapse in California. Int J Tuberc Lung Dis. 2016 Mar; 20(3):363-9. PMID: 27046718.
      View in: PubMed
    13. Duque-Silva A, Robsky K, Flood J, Barry P. Risk Factors for Central Nervous System Tuberculosis. Pediatrics. 2015 Nov; 136(5):e1276-84. PMID: 26438712.
      View in: PubMed
    14. Chitnis AS, Davis JL, Schecter GF, Barry P, Flood JM. Review of nucleic acid amplification tests and clinical prediction rules for diagnosis of tuberculosis in acute care facilities. Infect Control Hosp Epidemiol. 2015 Oct; 36(10):1215-25. PMID: 26166303.
      View in: PubMed
    15. Chitnis AS, Robsky K, Schecter GF, Westenhouse J, Barry P. Trends in Tuberculosis Cases Among Nursing Home Residents, California, 2000 to 2009. J Am Geriatr Soc. 2015 Jun; 63(6):1098-104. PMID: 26096384.
      View in: PubMed
    16. Demlow SE, Oh P, Barry P. Increased risk of tuberculosis among foreign-born persons with diabetes in California, 2010-2012. BMC Public Health. 2015 Mar 18; 15:263. PMID: 25884596; PMCID: PMC4381455.
    17. Coscolla M, Barry P, Oeltmann JE, Koshinsky H, Shaw T, Cilnis M, Posey J, Rose J, Weber T, Fofanov VY, Gagneux S, Kato-Maeda M, Metcalfe JZ. Genomic epidemiology of multidrug-resistant Mycobacterium tuberculosis during transcontinental spread. J Infect Dis. 2015 Jul 15; 212(2):302-10. PMID: 25601940; PMCID: PMC4490235.
    18. Kelly JD, Grace Lin SY, Barry P, Keh C, Higashi J, Metcalfe JZ. Xpert MTB/RIF false detection of rifampin-resistant tuberculosis from prior infection. Am J Respir Crit Care Med. 2014 Dec 01; 190(11):1316-8. PMID: 25436783.
      View in: PubMed
    19. Ehman M, Flood J, Barry P. Tuberculosis treatment managed by providers outside the Public Health Department: lessons for the Affordable Care Act. PLoS One. 2014; 9(10):e110645. PMID: 25340876; PMCID: PMC4207732.
    20. Pascopella L, Barry P, Flood J, DeRiemer K. Death with tuberculosis in california, 1994-2008. Open Forum Infect Dis. 2014 Dec; 1(3):ofu090. PMID: 25734158; PMCID: PMC4324218.
    21. Chitnis AS, Schecter GF, Cilnis M, Robsky K, Flood JM, Barry P. Epidemiology of tuberculosis cases with end-stage renal disease, California, 2010. Am J Nephrol. 2014; 39(4):314-21. PMID: 24751696.
      View in: PubMed
    22. Prach LM, Pascopella L, Barry P, Flood J, Porco TC, Hopewell PC, Metcalfe JZ. Rifampin monoresistant tuberculosis and HIV comorbidity in California, 1993-2008: a retrospective cohort study. AIDS. 2013 Oct 23; 27(16):2615-22. PMID: 23842135; PMCID: PMC4296030.
    23. Bernstein KT, Marcus JL, Barry P, Pandori MW, Buono S, Hess D, Philip SS. Characteristics of males infected with common Neisseria gonorrhoeae sequence types in the Gonococcal Isolate Surveillance Project, San Francisco, California, 2009. Am J Epidemiol. 2013 Oct 15; 178(8):1289-95. PMID: 24049157.
      View in: PubMed
    24. Ehman M, Shaw T, Cass A, Lawton E, Westenhouse J, Young J, Royce S, Barry P. Developing and using performance measures based on surveillance data for program improvement in tuberculosis control. J Public Health Manag Pract. 2013 Sep-Oct; 19(5):E29-37. PMID: 23263627.
      View in: PubMed
    25. Hess D, Wu A, Golparian D, Esmaili S, Pandori W, Sena E, Klausner JD, Barry P, Unemo M, Pandori M. Genome sequencing of a Neisseria gonorrhoeae isolate of a successful international clone with decreased susceptibility and resistance to extended-spectrum cephalosporins. Antimicrob Agents Chemother. 2012 Nov; 56(11):5633-41. PMID: 22908152; PMCID: PMC3486552.
    26. Buono S, Wu A, Hess DC, Carlson JS, Rauch L, Philip SS, Barry P, Bernstein K, Klausner JD, Pandori MW. Using the Neisseria gonorrhoeae multiantigen sequence-typing method to assess strain diversity and antibiotic resistance in San Francisco, California. Microb Drug Resist. 2012 Oct; 18(5):510-7. PMID: 22686196.
      View in: PubMed
    27. Stoltey JE, Barry P. The use of cephalosporins for gonorrhea: an update on the rising problem of resistance. Expert Opin Pharmacother. 2012 Jul; 13(10):1411-20. PMID: 22646654; PMCID: PMC4079034.
    28. Barry P, Gardner TJ, Funk E, Oren E, Field K, Shaw T, Langer AJ. Multistate outbreak of MDR TB identified by genotype cluster investigation. Emerg Infect Dis. 2012 Jan; 18(1):113-6. PMID: 22260877; PMCID: PMC3310103.
    29. Marcus JL, Kohn RP, Barry P, Philip SS, Bernstein KT. Chlamydia trachomatis and Neisseria gonorrhoeae transmission from the female oropharynx to the male urethra. Sex Transm Dis. 2011 May; 38(5):372-3. PMID: 21183864.
      View in: PubMed
    30. Barry P, Kent CK, Philip SS, Klausner JD. Results of a program to test women for rectal chlamydia and gonorrhea. Obstet Gynecol. 2010 Apr; 115(4):753-9. PMID: 20308835.
      View in: PubMed
    31. Bernstein KT, Stephens SC, Barry P, Kohn R, Philip SS, Liska S, Klausner JD. Chlamydia trachomatis and Neisseria gonorrhoeae transmission from the oropharynx to the urethra among men who have sex with men. Clin Infect Dis. 2009 Dec 15; 49(12):1793-7. PMID: 19911970.
      View in: PubMed
    32. Pandori M, Barry P, Wu A, Ren A, Whittington WL, Liska S, Klausner JD. Mosaic penicillin-binding protein 2 in Neisseria gonorrhoeae isolates collected in 2008 in San Francisco, California. Antimicrob Agents Chemother. 2009 Sep; 53(9):4032-4. PMID: 19546370; PMCID: PMC2737862.
    33. Barry P, Klausner JD. The use of cephalosporins for gonorrhea: the impending problem of resistance. Expert Opin Pharmacother. 2009 Mar; 10(4):555-77. PMID: 19284360; PMCID: PMC2657229.
    34. Barry P, Kent CK, Scott KC, Goldenson J, Klausner JD. Is jail screening associated with a decrease in Chlamydia positivity among females seeking health services at community clinics?-San francisco, 1997-2004. Sex Transm Dis. 2009 Feb; 36(2 Suppl):S22-8. PMID: 18418298.
      View in: PubMed
    35. Barry P, Kent CK, Klausner JD. Risk factors for gonorrhea among heterosexuals--San Francisco, 2006. Sex Transm Dis. 2009 Feb; 36(2 Suppl):S62-6. PMID: 18418303.
      View in: PubMed
    36. Barry P, Scott KC, McCright J, Snell A, Lee M, Bascom T, Kent CK, Klausner JD. Stay in school? Results of a sexually transmitted diseases screening program in San Francisco high schools-2007. Sex Transm Dis. 2008 Jun; 35(6):550-2. PMID: 18356770.
      View in: PubMed
    37. Siedner MJ, Pandori M, Leon SR, Barry P, Espinosa BJ, Hall ER, Coates TJ, Klausner JD. Detection of quinolone-resistant Neisseria gonorrhoeae in urogenital specimens with the use of real-time polymerase chain reaction. Int J STD AIDS. 2008 Jan; 19(1):69-71. PMID: 18275657.
      View in: PubMed
    38. Barry P, Kent CK, Scott KC, Snell A, Goldenson J, Klausner JD. Optimising sexually transmitted infection screening in correctional facilities: San Francisco, 2003-2005. Sex Transm Infect. 2007 Aug; 83(5):416-8. PMID: 17567685; PMCID: PMC2659043.
    39. Siedner MJ, Pandori M, Castro L, Barry P, Whittington WL, Liska S, Klausner JD. Real-time PCR assay for detection of quinolone-resistant Neisseria gonorrhoeae in urine samples. J Clin Microbiol. 2007 Apr; 45(4):1250-4. PMID: 17267635; PMCID: PMC1865802.
    40. Barry P, Klausner JD. The impact of STIs. MLO Med Lab Obs. 2006 Oct; 38(10):22, 24-5. PMID: 17086827.
      View in: PubMed
    41. Barry P, Zetola N, Keruly JC, Moore RD, Gebo KA, Lucas GM. Invasive pneumococcal disease in a cohort of HIV-infected adults: incidence and risk factors, 1990-2003. AIDS. 2006 Feb 14; 20(3):437-44. PMID: 16439878.
      View in: PubMed
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