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Pennan Barry, MD

TitleAssistant Clinical Professor
InstitutionUniversity of California San Francisco
DepartmentMedicine
Address550 16th. Street
San Francisco CA 94158
Phone510-620-3041
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Okada RC, Barry PM, Skarbinski J, Chitnis AS. Epidemiology, detection, and management of tuberculosis among end-stage renal disease patients. Infect Control Hosp Epidemiol. 2018 Sep 20; 1-8. PMID: 30231948.
      View in: PubMed
    2. Ahmad N, Ahuja SD, Akkerman OW, Alffenaar JC, Anderson LF, Baghaei P, Bang D, Barry PM, Bastos ML, Behera D, Benedetti A, Bisson GP, Boeree MJ, Bonnet M, Brode SK, Brust JCM, Cai Y, Caumes E, Cegielski JP, Centis R, Chan PC, Chan ED, Chang KC, Charles M, Cirule A, Dalcolmo MP, D'Ambrosio L, de Vries G, Dheda K, Esmail A, Flood J, Fox GJ, Fréchet-Jachym M, Fregona G, Gayoso R, Gegia M, Gler MT, Gu S, Guglielmetti L, Holtz TH, Hughes J, Isaakidis P, Jarlsberg L, Kempker RR, Keshavjee S, Khan FA, Kipiani M, Koenig SP, Koh WJ, Kritski A, Kuksa L, Kvasnovsky CL, Kwak N, Lan Z, Lange C, Laniado-Laborín R, Lee M, Leimane V, Leung CC, Leung EC, Li PZ, Lowenthal P, Maciel EL, Marks SM, Mase S, Mbuagbaw L, Migliori GB, Milanov V, Miller AC, Mitnick CD, Modongo C, Mohr E, Monedero I, Nahid P, Ndjeka N, O'Donnell MR, Padayatchi N, Palmero D, Pape JW, Podewils LJ, Reynolds I, Riekstina V, Robert J, Rodriguez M, Seaworth B, Seung KJ, Schnippel K, Shim TS, Singla R, Smith SE, Sotgiu G, Sukhbaatar G, Tabarsi P, Tiberi S, Trajman A, Trieu L, Udwadia ZF, van der Werf TS, Veziris N, Viiklepp P, Vilbrun SC, Walsh K, Westenhouse J, Yew WW, Yim JJ, Zetola NM, Zignol M, Menzies D. Treatment correlates of successful outcomes in pulmonary multidrug-resistant tuberculosis: an individual patient data meta-analysis. Lancet. 2018 Sep 08; 392(10150):821-834. PMID: 30215381.
      View in: PubMed
    3. Duque-Silva A, Hampole V, Cheng YN, Flood J, Barry PM. Outcomes of Pediatric Central Nervous System Tuberculosis in California, 1993-2011. J Pediatric Infect Dis Soc. 2018 Sep 04. PMID: 30189047.
      View in: PubMed
    4. Harausz EP, Garcia-Prats AJ, Law S, Schaaf HS, Kredo T, Seddon JA, Menzies D, Turkova A, Achar J, Amanullah F, Barry P, Becerra M, Chan ED, Chan PC, Ioana Chiotan D, Crossa A, Drobac PC, Fairlie L, Falzon D, Flood J, Gegia M, Hicks RM, Isaakidis P, Kadri SM, Kampmann B, Madhi SA, Marais E, Mariandyshev A, Méndez-Echevarría A, Moore BK, Nargiza P, Ozere I, Padayatchi N, Ur-Rehman S, Rybak N, Santiago-Garcia B, Shah NS, Sharma S, Shim TS, Skrahina A, Soriano-Arandes A, van den Boom M, van der Werf MJ, van der Werf TS, Williams B, Yablokova E, Yim JJ, Furin J, Hesseling AC. Treatment and outcomes in children with multidrug-resistant tuberculosis: A systematic review and individual patient data meta-analysis. PLoS Med. 2018 Jul; 15(7):e1002591. PMID: 29995958.
      View in: PubMed
    5. Barry PM, True L. Using evidence to improve adherence and outcomes: personalized packages of patient support. Int J Tuberc Lung Dis. 2018 Jul 01; 22(7):710. PMID: 29914593.
      View in: PubMed
    6. Kay AW, Islam SM, Wendorf K, Westenhouse J, Barry PM. Interferon-? Release Assay Performance for Tuberculosis in Childhood. Pediatrics. 2018 May 04. PMID: 29728429.
      View in: PubMed
    7. Beavers SF, Pascopella L, Davidow AL, Mangan JM, Hirsch-Moverman YR, Golub JE, Blumberg HM, Webb RM, Royce RA, Buskin SE, Leonard MK, Weinfurter PC, Belknap RW, Hughes SE, Warkentin JV, Welbel SF, Miller TL, Kundipati SR, Lauzardo M, Barry PM, Katz DJ, Garrett DO, Graviss EA, Flood JM. Tuberculosis Mortality in the United States: Epidemiology and Prevention Opportunities. Ann Am Thorac Soc. 2018 Feb 28. PMID: 29490150.
      View in: PubMed
    8. Flood J, Barry PM. Mainstreaming Latent Tuberculosis Infection Testing and Treatment in the United States: Who and How. JAMA Intern Med. 2017 Dec 01; 177(12):1764-1765. PMID: 29049821.
      View in: PubMed
    9. Barry PM, Lowenthal P, True L, Henry L, Schack G, Wendorf K, Flood J, Shah N. Benefit of the Shorter Multidrug-Resistant Tuberculosis Treatment Regimen in California and Modified Eligibility Criteria. Am J Respir Crit Care Med. 2017 12 01; 196(11):1488-1489. PMID: 28665681.
      View in: PubMed
    10. Smith SE, Pratt R, Trieu L, Barry PM, Thai DT, Ahuja SD, Shah S. Epidemiology of Pediatric Multidrug-Resistant Tuberculosis in the United States, 1993-2014. Clin Infect Dis. 2017 Oct 16; 65(9):1437-1443. PMID: 28633501.
      View in: PubMed
    11. Blount RJ, Pascopella L, Catanzaro DG, Barry PM, English PB, Segal MR, Flood J, Meltzer D, Jones B, Balmes J, Nahid P. Traffic-Related Air Pollution and All-Cause Mortality during Tuberculosis Treatment in California. Environ Health Perspect. 2017 09 29; 125(9):097026. PMID: 28963088.
      View in: PubMed
    12. Oh P, Pascopella L, Barry PM, Flood JM. A systematic synthesis of direct costs to treat and manage tuberculosis disease applied to California, 2015. BMC Res Notes. 2017 Aug 30; 10(1):434. PMID: 28854957.
      View in: PubMed
    13. Kay A, Barry PM, Annambhotla P, Greene C, Cilnis M, Chin-Hong P, Arger N, McNitt L, Neidlinger N, Shah N, Basavaraju SV, Kuehnert M, Shaw T. Solid Organ Transplant-Transmitted Tuberculosis Linked to a Community Outbreak - California, 2015. MMWR Morb Mortal Wkly Rep. 2017 Aug 04; 66(30):801-805. PMID: 28771459.
      View in: PubMed
    14. Lowenthal P, Barry PM, Flood J. Re: "Prebiologic Therapy Tuberculosis Screening Experience in a Pediatric Rheumatology Center: TST and IGRA Are Both Necessary". Pediatr Infect Dis J. 2017 Apr; 36(4):441. PMID: 28288086.
      View in: PubMed
    15. Peralta G, Barry P, Pascopella L. Use of Nucleic Acid Amplification Tests in Tuberculosis Patients in California, 2010-2013. Open Forum Infect Dis. 2016 Oct; 3(4):ofw230. PMID: 27957506.
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    16. Nahid P, Dorman SE, Alipanah N, Barry PM, Brozek JL, Cattamanchi A, Chaisson LH, Chaisson RE, Daley CL, Grzemska M, Higashi JM, Ho CS, Hopewell PC, Keshavjee SA, Lienhardt C, Menzies R, Merrifield C, Narita M, O'Brien R, Peloquin CA, Raftery A, Saukkonen J, Schaaf HS, Sotgiu G, Starke JR, Migliori GB, Vernon A. Executive Summary: Official American Thoracic Society/Centers for Disease Control and Prevention/Infectious Diseases Society of America Clinical Practice Guidelines: Treatment of Drug-Susceptible Tuberculosis. Clin Infect Dis. 2016 Oct 01; 63(7):853-67. PMID: 27621353.
      View in: PubMed
    17. Shah NS, Grace Lin SY, Barry PM, Cheng YN, Schecter G, Desmond E. Clinical Impact on Tuberculosis Treatment Outcomes of Discordance Between Molecular and Growth-Based Assays for Rifampin Resistance, California 2003-2013. Open Forum Infect Dis. 2016 Sep; 3(3):ofw150. PMID: 27704008.
      View in: PubMed
    18. Nahid P, Dorman SE, Alipanah N, Barry PM, Brozek JL, Cattamanchi A, Chaisson LH, Chaisson RE, Daley CL, Grzemska M, Higashi JM, Ho CS, Hopewell PC, Keshavjee SA, Lienhardt C, Menzies R, Merrifield C, Narita M, O'Brien R, Peloquin CA, Raftery A, Saukkonen J, Schaaf HS, Sotgiu G, Starke JR, Migliori GB, Vernon A. Official American Thoracic Society/Centers for Disease Control and Prevention/Infectious Diseases Society of America Clinical Practice Guidelines: Treatment of Drug-Susceptible Tuberculosis. Clin Infect Dis. 2016 Oct 01; 63(7):e147-e195. PMID: 27516382.
      View in: PubMed
    19. Barry PM, Kay AW, Flood JM, Watt J. Getting to Zero: Tuberculosis Elimination in California. Curr Epidemiol Rep. 2016; 3:136-144. PMID: 27218013.
      View in: PubMed
    20. Lowenthal P, Barry PM, Flood J. High Discordance Between Pre-US and Post-US Entry Tuberculosis Test Results Among Immigrant Children: Is it Time to Adopt Interferon Gamma Release Assay for Preentry Tuberculosis Screening? Pediatr Infect Dis J. 2016 Mar; 35(3):231-6. PMID: 26646547.
      View in: PubMed
    21. Duque-Silva A, Robsky K, Flood J, Barry PM. Risk Factors for Central Nervous System Tuberculosis. Pediatrics. 2015 Nov; 136(5):e1276-84. PMID: 26438712.
      View in: PubMed
    22. Chitnis AS, Davis JL, Schecter GF, Barry PM, Flood JM. Review of nucleic acid amplification tests and clinical prediction rules for diagnosis of tuberculosis in acute care facilities. Infect Control Hosp Epidemiol. 2015 Oct; 36(10):1215-25. PMID: 26166303.
      View in: PubMed
    23. Chitnis AS, Robsky K, Schecter GF, Westenhouse J, Barry PM. Trends in Tuberculosis Cases Among Nursing Home Residents, California, 2000 to 2009. J Am Geriatr Soc. 2015 Jun; 63(6):1098-104. PMID: 26096384.
      View in: PubMed
    24. Demlow SE, Oh P, Barry PM. Increased risk of tuberculosis among foreign-born persons with diabetes in California, 2010-2012. BMC Public Health. 2015 Mar 18; 15:263. PMID: 25884596; PMCID: PMC4381455.
    25. Coscolla M, Barry PM, Oeltmann JE, Koshinsky H, Shaw T, Cilnis M, Posey J, Rose J, Weber T, Fofanov VY, Gagneux S, Kato-Maeda M, Metcalfe JZ. Genomic epidemiology of multidrug-resistant Mycobacterium tuberculosis during transcontinental spread. J Infect Dis. 2015 Jul 15; 212(2):302-10. PMID: 25601940; PMCID: PMC4490235.
    26. Kelly JD, Grace Lin SY, Barry PM, Keh C, Higashi J, Metcalfe JZ. Xpert MTB/RIF false detection of rifampin-resistant tuberculosis from prior infection. Am J Respir Crit Care Med. 2014 Dec 01; 190(11):1316-8. PMID: 25436783.
      View in: PubMed
    27. Ehman M, Flood J, Barry PM. Tuberculosis treatment managed by providers outside the Public Health Department: lessons for the Affordable Care Act. PLoS One. 2014; 9(10):e110645. PMID: 25340876; PMCID: PMC4207732.
    28. Pascopella L, Barry PM, Flood J, DeRiemer K. Death with tuberculosis in california, 1994-2008. Open Forum Infect Dis. 2014 Dec; 1(3):ofu090. PMID: 25734158; PMCID: PMC4324218.
    29. Chitnis AS, Schecter GF, Cilnis M, Robsky K, Flood JM, Barry PM. Epidemiology of tuberculosis cases with end-stage renal disease, California, 2010. Am J Nephrol. 2014; 39(4):314-21. PMID: 24751696.
      View in: PubMed
    30. Prach LM, Pascopella L, Barry PM, Flood J, Porco TC, Hopewell PC, Metcalfe JZ. Rifampin monoresistant tuberculosis and HIV comorbidity in California, 1993-2008: a retrospective cohort study. AIDS. 2013 Oct 23; 27(16):2615-22. PMID: 23842135; PMCID: PMC4296030.
    31. Bernstein KT, Marcus JL, Barry PM, Pandori MW, Buono S, Hess D, Philip SS. Characteristics of males infected with common Neisseria gonorrhoeae sequence types in the Gonococcal Isolate Surveillance Project, San Francisco, California, 2009. Am J Epidemiol. 2013 Oct 15; 178(8):1289-95. PMID: 24049157.
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    32. Ehman M, Shaw T, Cass A, Lawton E, Westenhouse J, Young J, Royce S, Barry P. Developing and using performance measures based on surveillance data for program improvement in tuberculosis control. J Public Health Manag Pract. 2013 Sep-Oct; 19(5):E29-37. PMID: 23263627.
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    33. Hess D, Wu A, Golparian D, Esmaili S, Pandori W, Sena E, Klausner JD, Barry P, Unemo M, Pandori M. Genome sequencing of a Neisseria gonorrhoeae isolate of a successful international clone with decreased susceptibility and resistance to extended-spectrum cephalosporins. Antimicrob Agents Chemother. 2012 Nov; 56(11):5633-41. PMID: 22908152; PMCID: PMC3486552.
    34. Buono S, Wu A, Hess DC, Carlson JS, Rauch L, Philip SS, Barry P, Bernstein K, Klausner JD, Pandori MW. Using the Neisseria gonorrhoeae multiantigen sequence-typing method to assess strain diversity and antibiotic resistance in San Francisco, California. Microb Drug Resist. 2012 Oct; 18(5):510-7. PMID: 22686196.
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    35. Stoltey JE, Barry PM. The use of cephalosporins for gonorrhea: an update on the rising problem of resistance. Expert Opin Pharmacother. 2012 Jul; 13(10):1411-20. PMID: 22646654; PMCID: PMC4079034.
    36. Barry PM, Gardner TJ, Funk E, Oren E, Field K, Shaw T, Langer AJ. Multistate outbreak of MDR TB identified by genotype cluster investigation. Emerg Infect Dis. 2012 Jan; 18(1):113-6. PMID: 22260877; PMCID: PMC3310103.
    37. Marcus JL, Kohn RP, Barry PM, Philip SS, Bernstein KT. Chlamydia trachomatis and Neisseria gonorrhoeae transmission from the female oropharynx to the male urethra. Sex Transm Dis. 2011 May; 38(5):372-3. PMID: 21183864.
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    38. Barry PM, Kent CK, Philip SS, Klausner JD. Results of a program to test women for rectal chlamydia and gonorrhea. Obstet Gynecol. 2010 Apr; 115(4):753-9. PMID: 20308835.
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    39. Bernstein KT, Stephens SC, Barry PM, Kohn R, Philip SS, Liska S, Klausner JD. Chlamydia trachomatis and Neisseria gonorrhoeae transmission from the oropharynx to the urethra among men who have sex with men. Clin Infect Dis. 2009 Dec 15; 49(12):1793-7. PMID: 19911970.
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    40. Pandori M, Barry PM, Wu A, Ren A, Whittington WL, Liska S, Klausner JD. Mosaic penicillin-binding protein 2 in Neisseria gonorrhoeae isolates collected in 2008 in San Francisco, California. Antimicrob Agents Chemother. 2009 Sep; 53(9):4032-4. PMID: 19546370; PMCID: PMC2737862.
    41. Barry PM, Klausner JD. The use of cephalosporins for gonorrhea: the impending problem of resistance. Expert Opin Pharmacother. 2009 Mar; 10(4):555-77. PMID: 19284360; PMCID: PMC2657229.
    42. Barry PM, Kent CK, Klausner JD. Risk factors for gonorrhea among heterosexuals--San Francisco, 2006. Sex Transm Dis. 2009 Feb; 36(2 Suppl):S62-6. PMID: 18418303.
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    43. Barry PM, Kent CK, Scott KC, Goldenson J, Klausner JD. Is jail screening associated with a decrease in Chlamydia positivity among females seeking health services at community clinics?-San francisco, 1997-2004. Sex Transm Dis. 2009 Feb; 36(2 Suppl):S22-8. PMID: 18418298.
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    44. Barry PM, Scott KC, McCright J, Snell A, Lee M, Bascom T, Kent CK, Klausner JD. Stay in school? Results of a sexually transmitted diseases screening program in San Francisco high schools-2007. Sex Transm Dis. 2008 Jun; 35(6):550-2. PMID: 18356770.
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    45. Siedner MJ, Pandori M, Leon SR, Barry PM, Espinosa BJ, Hall ER, Coates TJ, Klausner JD. Detection of quinolone-resistant Neisseria gonorrhoeae in urogenital specimens with the use of real-time polymerase chain reaction. Int J STD AIDS. 2008 Jan; 19(1):69-71. PMID: 18275657.
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    46. Barry PM, Kent CK, Scott KC, Snell A, Goldenson J, Klausner JD. Optimising sexually transmitted infection screening in correctional facilities: San Francisco, 2003-2005. Sex Transm Infect. 2007 Aug; 83(5):416-8. PMID: 17567685; PMCID: PMC2659043.
    47. Siedner MJ, Pandori M, Castro L, Barry P, Whittington WL, Liska S, Klausner JD. Real-time PCR assay for detection of quinolone-resistant Neisseria gonorrhoeae in urine samples. J Clin Microbiol. 2007 Apr; 45(4):1250-4. PMID: 17267635; PMCID: PMC1865802.
    48. Barry PM, Klausner JD. The impact of STIs. MLO Med Lab Obs. 2006 Oct; 38(10):22, 24-5. PMID: 17086827.
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    49. Barry PM, Zetola N, Keruly JC, Moore RD, Gebo KA, Lucas GM. Invasive pneumococcal disease in a cohort of HIV-infected adults: incidence and risk factors, 1990-2003. AIDS. 2006 Feb 14; 20(3):437-44. PMID: 16439878.
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