Yoshinori Kohwi, PhD

Title(s)Adjunct Professor, Orofacial Sciences
SchoolSchool of Dentistry
Address513 Parnassus Avenue, HSW, #860
San Francisco CA 94143
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. The therapeutically actionable long non-coding RNA 'T-RECS' is essential to cancer cells' survival in NRAS/MAPK-driven melanoma. Mol Cancer. 2024 02 22; 23(1):40. Feichtenschlager V, Chen L, Zheng YJ, Ho W, Sanlorenzo M, Vujic I, Fewings E, Lee A, Chen C, Callanan C, Lin K, Qu T, Hohlova D, Vujic M, Hwang Y, Lai K, Chen S, Nguyen T, Muñoz DP, Kohwi Y, Posch C, Daud A, Rappersberger K, Kohwi-Shigematsu T, Coppé JP, Ortiz-Urda S. PMID: 38383439; PMCID: PMC10882889.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansAnimalsCells
    2. The therapeutically actionable long non-coding RNA 'T-RECS' is essential to cancer cells' survival in NRAS/MAPK-driven melanoma. Res Sq. 2023 Dec 01. Feichtenschlager V, Chen L, Zheng YJ, Ho W, Sanlorenzo M, Vujic I, Fewings E, Lee A, Chen C, Callanan C, Lin K, Qu T, Hohlova D, Vujic M, Hwang Y, Lai K, Chen S, Nguyen T, Muñoz DP, Kohwi Y, Posch C, Daud A, Rappersberger K, Kohwi-Shigematsu T, Coppé JP, Ortiz-Urda S. PMID: 38077055; PMCID: PMC10705697.
      View in: PubMed   Mentions:
    3. Chromatin organizer SATB1 controls the cell identity of CD4+ CD8+ double-positive thymocytes by regulating the activity of super-enhancers. Nat Commun. 2022 09 22; 13(1):5554. Feng D, Chen Y, Dai R, Bian S, Xue W, Zhu Y, Li Z, Yang Y, Zhang Y, Zhang J, Bai J, Qin L, Kohwi Y, Shi W, Kohwi-Shigematsu T, Ma J, Liao S, Hao B. PMID: 36138028; PMCID: PMC9500044.
      View in: PubMed   Mentions: 11     Fields:    Translation:Cells
    4. SATB1 establishes ameloblast cell polarity and regulates directional amelogenin secretion for enamel formation. BMC Biol. 2019 12 13; 17(1):104. Zhang Y, Zheng L, Le M, Nakano Y, Chan B, Huang Y, Torbaty PM, Kohwi Y, Marcucio R, Habelitz S, Den Besten PK, Kohwi-Shigematsu T. PMID: 31830989; PMCID: PMC6909472.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansAnimalsCells
    5. Essential Roles of SATB1 in Specifying T Lymphocyte Subsets. Cell Rep. 2017 05 09; 19(6):1176-1188. Kakugawa K, Kojo S, Tanaka H, Seo W, Endo TA, Kitagawa Y, Muroi S, Tenno M, Yasmin N, Kohwi Y, Sakaguchi S, Kowhi-Shigematsu T, Taniuchi I. PMID: 28494867.
      View in: PubMed   Mentions: 47     Fields:    Translation:AnimalsCells
    6. Satb2 Is Required for the Development of a Spinal Exteroceptive Microcircuit that Modulates Limb Position. Neuron. 2016 Aug 17; 91(4):763-776. Hilde KL, Levine AJ, Hinckley CA, Hayashi M, Montgomery JM, Gullo M, Driscoll SP, Grosschedl R, Kohwi Y, Kohwi-Shigematsu T, Pfaff SL. PMID: 27478017; PMCID: PMC5011456.
      View in: PubMed   Mentions: 20     Fields:    Translation:AnimalsCells
    7. An anti-silencer- and SATB1-dependent chromatin hub regulates Rag1 and Rag2 gene expression during thymocyte development. J Exp Med. 2015 May 04; 212(5):809-24. Hao B, Naik AK, Watanabe A, Tanaka H, Chen L, Richards HW, Kondo M, Taniuchi I, Kohwi Y, Kohwi-Shigematsu T, Krangel MS. PMID: 25847946; PMCID: PMC4419350.
      View in: PubMed   Mentions: 32     Fields:    Translation:AnimalsCells
    8. Required enhancer-matrin-3 network interactions for a homeodomain transcription program. Nature. 2014 Oct 09; 514(7521):257-61. Skowronska-Krawczyk D, Ma Q, Schwartz M, Scully K, Li W, Liu Z, Taylor H, Tollkuhn J, Ohgi KA, Notani D, Kohwi Y, Kohwi-Shigematsu T, Rosenfeld MG. PMID: 25119036; PMCID: PMC4358797.
      View in: PubMed   Mentions: 37     Fields:    Translation:HumansAnimalsCells
    9. ATM suppresses SATB1-induced malignant progression in breast epithelial cells. PLoS One. 2012; 7(12):e51786. Ordinario E, Han HJ, Furuta S, Heiser LM, Jakkula LR, Rodier F, Spellman PT, Campisi J, Gray JW, Bissell MJ, Kohwi Y, Kohwi-Shigematsu T. PMID: 23251624; PMCID: PMC3519734.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansAnimalsCells
    10. A network of genetic repression and derepression specifies projection fates in the developing neocortex. Proc Natl Acad Sci U S A. 2012 Nov 20; 109(47):19071-8. Srinivasan K, Leone DP, Bateson RK, Dobreva G, Kohwi Y, Kohwi-Shigematsu T, Grosschedl R, McConnell SK. PMID: 23144223; PMCID: PMC3511157.
      View in: PubMed   Mentions: 100     Fields:    Translation:AnimalsCells
    11. SATB1-mediated functional packaging of chromatin into loops. Methods. 2012 Nov; 58(3):243-54. Kohwi-Shigematsu T, Kohwi Y, Takahashi K, Richards HW, Ayers SD, Han HJ, Cai S. PMID: 22782115; PMCID: PMC4029128.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansAnimalsCells
    12. Genome organizing function of SATB1 in tumor progression. Semin Cancer Biol. 2013 Apr; 23(2):72-9. Kohwi-Shigematsu T, Poterlowicz K, Ordinario E, Han HJ, Botchkarev VA, Kohwi Y. PMID: 22771615; PMCID: PMC4048061.
      View in: PubMed   Mentions: 71     Fields:    Translation:HumansAnimalsCells
    13. Satb1 ablation alters temporal expression of immediate early genes and reduces dendritic spine density during postnatal brain development. Mol Cell Biol. 2012 Jan; 32(2):333-47. Balamotis MA, Tamberg N, Woo YJ, Li J, Davy B, Kohwi-Shigematsu T, Kohwi Y. PMID: 22064485; PMCID: PMC3255767.
      View in: PubMed   Mentions: 43     Fields:    Translation:AnimalsCells
    14. p63 regulates Satb1 to control tissue-specific chromatin remodeling during development of the epidermis. J Cell Biol. 2011 Sep 19; 194(6):825-39. Fessing MY, Mardaryev AN, Gdula MR, Sharov AA, Sharova TY, Rapisarda V, Gordon KB, Smorodchenko AD, Poterlowicz K, Ferone G, Kohwi Y, Missero C, Kohwi-Shigematsu T, Botchkarev VA. PMID: 21930775; PMCID: PMC3207288.
      View in: PubMed   Mentions: 106     Fields:    Translation:AnimalsCells
    15. Re: The role of SATB1 in breast cancer pathogenesis. J Natl Cancer Inst. 2010 Dec 15; 102(24):1879-80; author reply 1880-1. Kohwi-Shigematsu T, Han HJ, Russo J, Kohwi Y. PMID: 21076049; PMCID: PMC3001965.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansAnimalsCells
    16. New advances in breast cancer metastasis. Womens Health (Lond). 2008 Nov; 4(6):547-9. Russo J, Han HJ, Kohwi Y, Kohwi-Shigematsu T. PMID: 19072455; PMCID: PMC2605101.
      View in: PubMed   Mentions:    Fields:    
    17. SATB1 reprogrammes gene expression to promote breast tumour growth and metastasis. Nature. 2008 Mar 13; 452(7184):187-93. Han HJ, Russo J, Kohwi Y, Kohwi-Shigematsu T. PMID: 18337816.
      View in: PubMed   Mentions: 264     Fields:    Translation:HumansAnimalsCells
    18. Identification of (CAG)(n) and (CGG)(n) repeat-binding proteins, CAGERs expressed in mature neurons of the mouse brain. Exp Cell Res. 1999 Sep 15; 251(2):388-400. Yano H, Wang BE, Ahmad I, Zhang J, Abo T, Nakayama J, Krempen K, Kohwi Y. PMID: 10471324.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    19. Molecular characterization of a common fragile site (FRA7H) on human chromosome 7 by the cloning of a simian virus 40 integration site. Proc Natl Acad Sci U S A. 1998 Jul 07; 95(14):8141-6. Mishmar D, Rahat A, Scherer SW, Nyakatura G, Hinzmann B, Kohwi Y, Mandel-Gutfroind Y, Lee JR, Drescher B, Sas DE, Margalit H, Platzer M, Weiss A, Tsui LC, Rosenthal A, Kerem B. PMID: 9653154; PMCID: PMC20943.
      View in: PubMed   Mentions: 80     Fields:    Translation:HumansCells
    20. Identification of base-unpairing region-binding proteins and characterization of their in vivo binding sequences. Methods Cell Biol. 1998; 53:323-54. Kohwi-Shigematsu T, deBelle I, Dickinson LA, Galande S, Kohwi Y. PMID: 9348515.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansAnimalsCells
    21. A matrix attachment region (MAR)-binding activity due to a p114 kilodalton protein is found only in human breast carcinomas and not in normal and benign breast disease tissues. Cancer Res. 1996 Feb 01; 56(3):457-62. Yanagisawa J, Ando J, Nakayama J, Kohwi Y, Kohwi-Shigematsu T. PMID: 8564952.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansCells
    22. [Biological significance of nuclear matrix attachment regions (MAR) and tissue specific MAR-DNA binding proteins]. Seikagaku. 1995 Sep; 67(9):1115-27. Kohwi Y, Kohwi-Shigematsu T. PMID: 8530869.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    23. Single-stranded DNA binding proteins isolated from mouse brain recognize specific trinucleotide repeat sequences in vitro. Nucleic Acids Res. 1995 Jul 25; 23(14):2654-60. Yano-Yanagisawa H, Li Y, Wang H, Kohwi Y. PMID: 7651826; PMCID: PMC307089.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    24. A novel DNA-binding motif in the nuclear matrix attachment DNA-binding protein SATB1. Mol Cell Biol. 1994 Mar; 14(3):1852-60. Nakagomi K, Kohwi Y, Dickinson LA, Kohwi-Shigematsu T. PMID: 8114718; PMCID: PMC358543.
      View in: PubMed   Mentions: 40     Fields:    Translation:AnimalsCells
    25. The non-B-DNA structure of d(CA/TG)n differs from that of Z-DNA. Proc Natl Acad Sci U S A. 1994 Mar 01; 91(5):1898-902. Kladde MP, Kohwi Y, Kohwi-Shigematsu T, Gorski J. PMID: 8127902; PMCID: PMC43271.
      View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
    26. A single trinucleotide, 5'AGC3'/5'GCT3', of the triplet-repeat disease genes confers metal ion-induced non-B DNA structure. Nucleic Acids Res. 1993 Dec 11; 21(24):5651-5. Kohwi Y, Wang H, Kohwi-Shigematsu T. PMID: 8284211; PMCID: PMC310530.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    27. Transcription-dependent recombination induced by triple-helix formation. Genes Dev. 1993 Sep; 7(9):1766-78. Kohwi Y, Panchenko Y. PMID: 8370525.
      View in: PubMed   Mentions: 16     Fields:    Translation:Cells
    28. Structural polymorphism of homopurine-homopyrimidine sequences at neutral pH. J Mol Biol. 1993 Jun 20; 231(4):1090-101. Kohwi Y, Kohwi-Shigematsu T. PMID: 8515467.
      View in: PubMed   Mentions: 4     Fields:    Translation:Cells
    29. A tissue-specific MAR/SAR DNA-binding protein with unusual binding site recognition. Cell. 1992 Aug 21; 70(4):631-45. Dickinson LA, Joh T, Kohwi Y, Kohwi-Shigematsu T. PMID: 1505028.
      View in: PubMed   Mentions: 187     Fields:    Translation:HumansCells
    30. Intramolecular dG.dG.dC triplex detected in Escherichia coli cells. J Mol Biol. 1992 Feb 20; 223(4):817-22. Kohwi Y, Malkhosyan SR, Kohwi-Shigematsu T. PMID: 1538396.
      View in: PubMed   Mentions: 18     Fields:    Translation:Cells
    31. Biological significance of unwinding capability of nuclear matrix-associating DNAs. Science. 1992 Jan 10; 255(5041):195-7. Bode J, Kohwi Y, Dickinson L, Joh T, Klehr D, Mielke C, Kohwi-Shigematsu T. PMID: 1553545.
      View in: PubMed   Mentions: 113     Fields:    Translation:HumansCells
    32. Detection of non-B-DNA structures at specific sites in supercoiled plasmid DNA and chromatin with haloacetaldehyde and diethyl pyrocarbonate. Methods Enzymol. 1992; 212:155-80. Kohwi-Shigematsu T, Kohwi Y. PMID: 1518447.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCells
    33. Altered gene expression correlates with DNA structure. Genes Dev. 1991 Dec; 5(12B):2547-54. Kohwi Y, Kohwi-Shigematsu T. PMID: 1752443.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansAnimalsCells
    34. Detection of triple-helix related structures adopted by poly(dG)-poly(dC) sequences in supercoiled plasmid DNA. Nucleic Acids Res. 1991 Aug 11; 19(15):4267-71. Kohwi-Shigematsu T, Kohwi Y. PMID: 1870980; PMCID: PMC328572.
      View in: PubMed   Mentions: 7     Fields:    Translation:Cells
    35. Torsional stress stabilizes extended base unpairing in suppressor sites flanking immunoglobulin heavy chain enhancer. Biochemistry. 1990 Oct 16; 29(41):9551-60. Kohwi-Shigematsu T, Kohwi Y. PMID: 2125477.
      View in: PubMed   Mentions: 40     Fields:    Translation:AnimalsCells
    36. Hierarchical binding of DNA fragments derived from scaffold-attached regions: correlation of properties in vitro and function in vivo. Biochemistry. 1990 Aug 14; 29(32):7475-85. Mielke C, Kohwi Y, Kohwi-Shigematsu T, Bode J. PMID: 2223779.
      View in: PubMed   Mentions: 38     Fields:    Translation:HumansAnimalsCells
    37. Non-B DNA structure: preferential target for the chemical carcinogen glycidaldehyde. Carcinogenesis. 1989 Nov; 10(11):2035-42. Kohwi Y. PMID: 2805227.
      View in: PubMed   Mentions: 2     Fields:    Translation:Cells
    38. Cationic metal-specific structures adopted by the poly(dG) region and the direct repeats in the chicken adult beta A globin gene promoter. Nucleic Acids Res. 1989 Jun 26; 17(12):4493-502. Kohwi Y. PMID: 2748332; PMCID: PMC318009.
      View in: PubMed   Mentions: 14     Fields:    Translation:AnimalsCells
    39. Magnesium ion-dependent triple-helix structure formed by homopurine-homopyrimidine sequences in supercoiled plasmid DNA. Proc Natl Acad Sci U S A. 1988 Jun; 85(11):3781-5. Kohwi Y, Kohwi-Shigematsu T. PMID: 3375241; PMCID: PMC280302.
      View in: PubMed   Mentions: 98     Fields:    Translation:Cells
    40. An ultimate chemical carcinogen, N-acetoxy-2-acetylaminofluorene, detects non-B DNA structures that are reactive with chloroacetaldehyde in supercoiled plasmid DNA. Carcinogenesis. 1988 Mar; 9(3):457-61. Kohwi-Shigematsu T, Scribner N, Kohwi Y. PMID: 3345584.
      View in: PubMed   Mentions: 3     Fields:    Translation:Cells
    41. Unusual conformational effect exerted by Z-DNA upon its neighboring sequences. Proc Natl Acad Sci U S A. 1987 Apr; 84(8):2223-7. Kohwi-Shigematsu T, Manes T, Kohwi Y. PMID: 3470786; PMCID: PMC304621.
      View in: PubMed   Mentions: 11     Fields:    Translation:Cells
    42. Poly(dG)-poly(dC) sequences, under torsional stress, induce an altered DNA conformation upon neighboring DNA sequences. Cell. 1985 Nov; 43(1):199-206. Kohwi-Shigematsu T, Kohwi Y. PMID: 4075394.
      View in: PubMed   Mentions: 30     Fields:    Translation:Cells
    43. Amphipathic lipid-bound protein antigens in mouse bladder carcinomas detected by a monoclonal antibody. Biochemistry. 1984 Dec 04; 23(25):5945-50. Kohwi Y, Hellström I, Hakomori S, Hellström KE. PMID: 6395887.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    44. Antitumor effect of Bifidobacterium infantis in mice. Gan. 1978 Oct; 69(5):613-8. Kohwi Y, Imai K, Tamura Z, Hashimoto Y. PMID: 729960.
      View in: PubMed   Mentions: 23     Fields:    Translation:AnimalsCells
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