Bryan Pavlovic, PhD, MS

Title(s)Assistant Researcher, Neurology
SchoolSchool of Medicine
Address35 Medical Center Way, #001
San Francisco CA 94143
ORCID ORCID Icon0000-0002-7751-5315 Additional info
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    Collapse Biography 
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    University of Chicago, ChicagoPhD03/2018Human Genetics
    University of California, Santa Cruz , Santa CruzBS05/2007Biochemistry and Molecular Biology

    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. CellBouncer, A Unified Toolkit for Single-Cell Demultiplexing and Ambient RNA Analysis, Reveals Hominid Mitochondrial Incompatibilities. bioRxiv. 2025 Mar 23. Schaefer NK, Pavlovic BJ, Pollen AA. PMID: 40166335; PMCID: PMC11957168.
      View in: PubMed   Mentions:
    2. Mapping cis- and trans-regulatory target genes of human-specific deletions. bioRxiv. 2024 Dec 01. Fair T, Pavlovic BJ, Swope D, Castillo OE, Schaefer NK, Pollen AA. PMID: 38234800; PMCID: PMC10793408.
      View in: PubMed   Mentions:
    3. INTERSPECIES ORGANOIDS REVEAL HUMAN-SPECIFIC MOLECULAR FEATURES OF DOPAMINERGIC NEURON DEVELOPMENT AND VULNERABILITY. bioRxiv. 2024 Nov 15. Nolbrant S, Wallace JL, Ding J, Zhu T, Sevetson JL, Kajtez J, Baldacci IA, Corrigan EK, Hoglin K, McMullen R, Schmitz MT, Breevoort A, Swope D, Wu F, Pavlovic BJ, Salama SR, Kirkeby A, Huang H, Schaefer NK, Pollen AA. PMID: 39605599; PMCID: PMC11601475.
      View in: PubMed   Mentions:
    4. Thalamocortical organoids enable in vitro modeling of 22q11.2 microdeletion associated with neuropsychiatric disorders. Cell Stem Cell. 2024 03 07; 31(3):421-432.e8. Shin D, Kim CN, Ross J, Hennick KM, Wu SR, Paranjape N, Leonard R, Wang JC, Keefe MG, Pavlovic BJ, Donohue KC, Moreau C, Wigdor EM, Larson HH, Allen DE, Cadwell CR, Bhaduri A, Popova G, Bearden CE, Pollen AA, Jacquemont S, Sanders SJ, Haussler D, Wiita AP, Frost NA, Sohal VS, Nowakowski TJ. PMID: 38382530; PMCID: PMC10939828.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    5. Comparative landscape of genetic dependencies in human and chimpanzee stem cells. Cell. 2023 07 06; 186(14):2977-2994.e23. She R, Fair T, Schaefer NK, Saunders RA, Pavlovic BJ, Weissman JS, Pollen AA. PMID: 37343560; PMCID: PMC10461406.
      View in: PubMed   Mentions: 8     Fields:    
    6. Comparative landscape of genetic dependencies in human and chimpanzee stem cells. bioRxiv. 2023 Mar 20. She R, Fair T, Schaefer NK, Saunders RA, Pavlovic BJ, Weissman JS, Pollen AA. PMID: 36993685; PMCID: PMC10055274.
      View in: PubMed   Mentions:
    7. Rethinking nomenclature for interspecies cell fusions. Nat Rev Genet. 2022 05; 23(5):315-320. Pavlovic BJ, Fox D, Schaefer NK, Pollen AA. PMID: 35082442.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    8. Gene expression variability in human and chimpanzee populations share common determinants. Elife. 2020 10 21; 9. Fair BJ, Blake LE, Sarkar A, Pavlovic BJ, Cuevas C, Gilad Y. PMID: 33084571; PMCID: PMC7644215.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansAnimals
    9. Getting to the heart of cardiovascular evolution in humans. Elife. 2019 05 28; 8. Pollen A, Pavlovic BJ. PMID: 31135336; PMCID: PMC6538371.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    10. Establishing Cerebral Organoids as Models of Human-Specific Brain Evolution. Cell. 2019 02 07; 176(4):743-756.e17. Pollen AA, Bhaduri A, Andrews MG, Nowakowski TJ, Meyerson OS, Mostajo-Radji MA, Di Lullo E, Alvarado B, Bedolli M, Dougherty ML, Fiddes IT, Kronenberg ZN, Shuga J, Leyrat AA, West JA, Bershteyn M, Lowe CB, Pavlovic BJ, Salama SR, Haussler D, Eichler EE, Kriegstein AR. PMID: 30735633; PMCID: PMC6544371.
      View in: PubMed   Mentions: 266     Fields:    Translation:HumansAnimalsCells
    11. A Comparative Assessment of Human and Chimpanzee iPSC-derived Cardiomyocytes with Primary Heart Tissues. Sci Rep. 2018 10 17; 8(1):15312. Pavlovic BJ, Blake LE, Roux J, Chavarria C, Gilad Y. PMID: 30333510; PMCID: PMC6193013.
      View in: PubMed   Mentions: 41     Fields:    Translation:HumansAnimalsCells
    12. A comparative study of endoderm differentiation in humans and chimpanzees. Genome Biol. 2018 10 15; 19(1):162. Blake LE, Thomas SM, Blischak JD, Hsiao CJ, Chavarria C, Myrthil M, Gilad Y, Pavlovic BJ. PMID: 30322406; PMCID: PMC6191992.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansAnimalsCells
    13. Silencing of transposable elements may not be a major driver of regulatory evolution in primate iPSCs. Elife. 2018 04 12; 7. Ward MC, Zhao S, Luo K, Pavlovic BJ, Karimi MM, Stephens M, Gilad Y. PMID: 29648536; PMCID: PMC5943035.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansAnimalsCells
    14. Impact of regulatory variation across human iPSCs and differentiated cells. Genome Res. 2018 01; 28(1):122-131. Banovich NE, Li YI, Raj A, Ward MC, Greenside P, Calderon D, Tung PY, Burnett JE, Myrthil M, Thomas SM, Burrows CK, Romero IG, Pavlovic BJ, Kundaje A, Pritchard JK, Gilad Y. PMID: 29208628; PMCID: PMC5749177.
      View in: PubMed   Mentions: 67     Fields:    Translation:HumansCells
    15. Genetic Variation, Not Cell Type of Origin, Underlies the Majority of Identifiable Regulatory Differences in iPSCs. PLoS Genet. 2016 Jan; 12(1):e1005793. Burrows CK, Banovich NE, Pavlovic BJ, Patterson K, Gallego Romero I, Pritchard JK, Gilad Y. PMID: 26812582; PMCID: PMC4727884.
      View in: PubMed   Mentions: 69     Fields:    Translation:HumansCells
    16. A panel of induced pluripotent stem cells from chimpanzees: a resource for comparative functional genomics. Elife. 2015 Jun 23; 4:e07103. Gallego Romero I, Pavlovic BJ, Hernando-Herraez I, Zhou X, Ward MC, Banovich NE, Kagan CL, Burnett JE, Huang CH, Mitrano A, Chavarria CI, Friedrich Ben-Nun I, Li Y, Sabatini K, Leonardo TR, Parast M, Marques-Bonet T, Laurent LC, Loring JF, Gilad Y. PMID: 26102527; PMCID: PMC4502404.
      View in: PubMed   Mentions: 68     Fields:    
    17. Reprogramming LCLs to iPSCs Results in Recovery of Donor-Specific Gene Expression Signature. PLoS Genet. 2015 May; 11(5):e1005216. Thomas SM, Kagan C, Pavlovic BJ, Burnett J, Patterson K, Pritchard JK, Gilad Y. PMID: 25950834; PMCID: PMC4423863.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCells
    18. The functional consequences of variation in transcription factor binding. PLoS Genet. 2014 Mar; 10(3):e1004226. Cusanovich DA, Pavlovic B, Pritchard JK, Gilad Y. PMID: 24603674; PMCID: PMC3945204.
      View in: PubMed   Mentions: 115     Fields:    Translation:HumansCells
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