Tomasz Nowakowski, PhD

Title(s)Assistant Professor, Anatomy
SchoolSchool of Medicine
Address505 Parnassus Avenue
San Francisco CA 94117
Phone415-476-0878
ORCID ORCID Icon0000-0003-2345-4964 Additional info
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    Collapse Biography 
    Collapse Education and Training
    University of Edinburgh , Edinburgh, UKBSc07/2007Biological Sciences
    University of Edinburgh , Edinburgh, UKPhD06/2012Biomedical Sciences
    University of California, San Francisco, San Francisco, CApostdoc06/2017Developmental Neurobiology
    University of California, San Francisco, CA09/2021Diversity, Equity, and Inclusion Champion Training
    Collapse Awards and Honors
    2021Klingenstein-Simons Fellowship Award in Neuroscience
    Chan-Zuckerberg Biohub2018Investigator
    Allen Institute for Brain Science2018  - 2021Next Generation Leaders Council, Member
    Eppendorf & Science Prize for Neurobiology2018Finalist
    Cajal Club2017Krieg Cortical Explorer
    Simons Foundation for Autism Research2018  - 2021Simons Foundation Bridge to Independence Award
    Brain & Behavior Research Foundation2019  - 2021NARSAD Young Investigator Award
    Broad Center Regenerative Med & Stem Cell Research 2017  - 2018Broad Innovation Award
    Wellcome Trust2007  - 2011Wellcome Trust 4-Year Studentship

    Collapse Overview 

    Collapse Featured Content 
    Collapse Featured Videos

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Single-cell delineation of lineage and genetic identity in the mouse brain. Nature. 2021 Dec 15. Bandler RC, Vitali I, Delgado RN, Ho MC, Dvoretskova E, Ibarra Molinas JS, Frazel PW, Mohammadkhani M, Machold R, Maedler S, Liddelow SA, Nowakowski TJ, Fishell G, Mayer C. PMID: 34912118.
      View in: PubMed   Mentions:
    2. Individual human cortical progenitors can produce excitatory and inhibitory neurons. Nature. 2021 Dec 15. Delgado RN, Allen DE, Keefe MG, Mancia Leon WR, Ziffra RS, Crouch EE, Alvarez-Buylla A, Nowakowski TJ. PMID: 34912114.
      View in: PubMed   Mentions:
    3. Endovascular Biopsy of Vertebrobasilar Aneurysm in Patient With Polyarteritis Nodosa. Front Neurol. 2021; 12:697105. Narsinh KH, Narsinh K, McCoy DB, Sun Z, Halabi C, Meisel K, Tihan T, Chaganti K, Amans MR, Halbach VV, Higashida RT, Hetts SW, Dowd CF, Winkler EA, Abla AA, Nowakowski TJ, Cooke DL. PMID: 34887823; PMCID: PMC8650719.
      View in: PubMed   Mentions:
    4. Picroscope: low-cost system for simultaneous longitudinal biological imaging. Commun Biol. 2021 Nov 04; 4(1):1261. Ly VT, Baudin PV, Pansodtee P, Jung EA, Voitiuk K, Rosen YM, Willsey HR, Mantalas GL, Seiler ST, Selberg JA, Cordero SA, Ross JM, Rolandi M, Pollen AA, Nowakowski TJ, Haussler D, Mostajo-Radji MA, Salama SR, Teodorescu M. PMID: 34737378; PMCID: PMC8569150.
      View in: PubMed   Mentions:
    5. Light-weight electrophysiology hardware and software platform for cloud-based neural recording experiments. J Neural Eng. 2021 Oct 19. Voitiuk K, Geng J, Keefe MG, Parks DF, Sanso SE, Hawthorne N, Freeman DB, Currie R, Mostajo-Radji MA, Pollen AA, Nowakowski TJ, Salama SR, Teodorescu M, Haussler D. PMID: 34666315.
      View in: PubMed   Mentions:    Fields:    
    6. An atlas of cortical arealization identifies dynamic molecular signatures. Nature. 2021 10; 598(7879):200-204. Bhaduri A, Sandoval-Espinosa C, Otero-Garcia M, Oh I, Yin R, Eze UC, Nowakowski TJ, Kriegstein AR. PMID: 34616070; PMCID: PMC8494648.
      View in: PubMed   Mentions:    Fields:    
    7. Single-cell epigenomics reveals mechanisms of human cortical development. Nature. 2021 Oct; 598(7879):205-213. Ziffra RS, Kim CN, Ross JM, Wilfert A, Turner TN, Haeussler M, Casella AM, Przytycki PF, Keough KC, Shin D, Bogdanoff D, Kreimer A, Pollard KS, Ament SA, Eichler EE, Ahituv N, Nowakowski TJ. PMID: 34616060.
      View in: PubMed   Mentions:    Fields:    
    8. Human microglia states are conserved across experimental models and regulate neural stem cell responses in chimeric organoids. Cell Stem Cell. 2021 Sep 16. Popova G, Soliman SS, Kim CN, Keefe MG, Hennick KM, Jain S, Li T, Tejera D, Shin D, Chhun BB, McGinnis CS, Speir M, Gartner ZJ, Mehta SB, Haeussler M, Hengen KB, Ransohoff RR, Piao X, Nowakowski TJ. PMID: 34536354.
      View in: PubMed   Mentions:    Fields:    
    9. Low cost cloud based remote microscopy for biological sciences. Internet of Things. 2021 Sep 1; 100454. Baudin BP, Ly LV, Pansodtee PP, Jung JE, Currie CR, Hoffman HR, Willsey WH, Pollen PA, Nowakowski NT, Haussler HD, Mostajo-Radji MM, Salama SS, Teodorescu TM. .
      View in: Publisher Site   Mentions:
    10. UCSC Cell Browser: Visualize Your Single-Cell Data. Bioinformatics. 2021 Jul 09. Speir ML, Bhaduri A, Markov NS, Moreno P, Nowakowski TJ, Papatheodorou I, Pollen AA, Raney BJ, Seninge L, Kent WJ, Haeussler M. PMID: 34244710.
      View in: PubMed   Mentions: 4     Fields:    
    11. Distinct nuclear compartment-associated genome architecture in the developing mammalian brain. Nat Neurosci. 2021 09; 24(9):1235-1242. Ahanger SH, Delgado RN, Gil E, Cole MA, Zhao J, Hong SJ, Kriegstein AR, Nowakowski TJ, Pollen AA, Lim DA. PMID: 34239128.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    12. The CHD8/CHD7/Kismet family links blood-brain barrier glia and serotonin to ASD-associated sleep defects. Sci Adv. 2021 Jun; 7(23). Coll-Tané M, Gong NN, Belfer SJ, van Renssen LV, Kurtz-Nelson EC, Szuperak M, Eidhof I, van Reijmersdal B, Terwindt I, Durkin J, Verheij MMM, Kim CN, Hudac CM, Nowakowski TJ, Bernier RA, Pillen S, Earl RK, Eichler EE, Kleefstra T, Kayser MS, Schenck A. PMID: 34088660.
      View in: PubMed   Mentions: 2     Fields:    
    13. Parallel in vivo analysis of large-effect autism genes implicates cortical neurogenesis and estrogen in risk and resilience. Neuron. 2021 Apr 21; 109(8):1409. Willsey HR, Exner CRT, Xu Y, Everitt A, Sun N, Wang B, Dea J, Schmunk G, Zaltsman Y, Teerikorpi N, Kim A, Anderson AS, Shin D, Seyler M, Nowakowski TJ, Harland RM, Willsey AJ, State MW. PMID: 33887193.
      View in: PubMed   Mentions:    Fields:    
    14. Rare deleterious mutations of HNRNP genes result in shared neurodevelopmental disorders. Genome Med. 2021 04 19; 13(1):63. Gillentine MA, Wang T, Hoekzema K, Rosenfeld J, Liu P, Guo H, Kim CN, De Vries BBA, Vissers LELM, Nordenskjold M, Kvarnung M, Lindstrand A, Nordgren A, Gecz J, Iascone M, Cereda A, Scatigno A, Maitz S, Zanni G, Bertini E, Zweier C, Schuhmann S, Wiesener A, Pepper M, Panjwani H, Torti E, Abid F, Anselm I, Srivastava S, Atwal P, Bacino CA, Bhat G, Cobian K, Bird LM, Friedman J, Wright MS, Callewaert B, Petit F, Mathieu S, Afenjar A, Christensen CK, White KM, Elpeleg O, Berger I, Espineli EJ, Fagerberg C, Brasch-Andersen C, Hansen LK, Feyma T, Hughes S, Thiffault I, Sullivan B, Yan S, Keller K, Keren B, Mignot C, Kooy F, Meuwissen M, Basinger A, Kukolich M, Philips M, Ortega L, Drummond-Borg M, Lauridsen M, Sorensen K, Lehman A, CAUSES Study , Lopez-Rangel E, Levy P, Lessel D, Lotze T, Madan-Khetarpal S, Sebastian J, Vento J, Vats D, Benman LM, Mckee S, Mirzaa GM, Muss C, Pappas J, Peeters H, Romano C, Elia M, Galesi O, Simon MEH, van Gassen KLI, Simpson K, Stratton R, Syed S, Thevenon J, Palafoll IV, Vitobello A, Bournez M, Faivre L, Xia K, SPARK Consortium , Earl RK, Nowakowski T, Bernier RA, Eichler EE. PMID: 33874999.
      View in: PubMed   Mentions: 1     Fields:    
    15. Single-cell atlas of early human brain development highlights heterogeneity of human neuroepithelial cells and early radial glia. Nat Neurosci. 2021 04; 24(4):584-594. Eze UC, Bhaduri A, Haeussler M, Nowakowski TJ, Kriegstein AR. PMID: 33723434.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansAnimalsCells
    16. Parallel in vivo analysis of large-effect autism genes implicates cortical neurogenesis and estrogen in risk and resilience. Neuron. 2021 03 03; 109(5):788-804.e8. Willsey HR, Exner CRT, Xu Y, Everitt A, Sun N, Wang B, Dea J, Schmunk G, Zaltsman Y, Teerikorpi N, Kim A, Anderson AS, Shin D, Seyler M, Nowakowski TJ, Harland RM, Willsey AJ, State MW. PMID: 33497602.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    17. The Expanding Cell Diversity of the Brain Vasculature. Front Physiol. 2020; 11:600767. Ross JM, Kim C, Allen D, Crouch EE, Narsinh K, Cooke DL, Abla AA, Nowakowski TJ, Winkler EA. PMID: 33343397.
      View in: PubMed   Mentions: 3  
    18. Are Organoids Ready for Prime Time? Cell Stem Cell. 2020 09 03; 27(3):361-365. Bhaduri A, Andrews MG, Kriegstein AR, Nowakowski TJ. PMID: 32888425.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    19. Revealing architectural order with quantitative label-free imaging and deep learning. Elife. 2020 07 27; 9. Guo SM, Yeh LH, Folkesson J, Ivanov IE, Krishnan AP, Keefe MG, Hashemi E, Shin D, Chhun BB, Cho NH, Leonetti MD, Han MH, Nowakowski TJ, Mehta SB. PMID: 32716843.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansAnimals
    20. A Chromatin Accessibility Atlas of the Developing Human Telencephalon. Cell. 2020 08 06; 182(3):754-769.e18. Markenscoff-Papadimitriou E, Whalen S, Przytycki P, Thomas R, Binyameen F, Nowakowski TJ, Kriegstein AR, Sanders SJ, State MW, Pollard KS, Rubenstein JL. PMID: 32610082.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansAnimalsCells
    21. Medulloblastoma Arises from the Persistence of a Rare and Transient Sox2+ Granule Neuron Precursor. Cell Rep. 2020 04 14; 31(2):107511. Selvadurai HJ, Luis E, Desai K, Lan X, Vladoiu MC, Whitley O, Galvin C, Vanner RJ, Lee L, Whetstone H, Kushida M, Nowakowski T, Diamandis P, Hawkins C, Bader G, Kriegstein A, Taylor MD, Dirks PB. PMID: 32294450.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
    22. Cell stress in cortical organoids impairs molecular subtype specification. Nature. 2020 02; 578(7793):142-148. Bhaduri A, Andrews MG, Mancia Leon W, Jung D, Shin D, Allen D, Jung D, Schmunk G, Haeussler M, Salma J, Pollen AA, Nowakowski TJ, Kriegstein AR. PMID: 31996853.
      View in: PubMed   Mentions: 74     Fields:    Translation:HumansCells
    23. Evolutionary Expansion of Human Cerebellar Germinal Zones. Trends Neurosci. 2020 02; 43(2):75-77. Keefe MG, Nowakowski TJ. PMID: 31954525.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    24. Outer Radial Glia-like Cancer Stem Cells Contribute to Heterogeneity of Glioblastoma. Cell Stem Cell. 2020 01 02; 26(1):48-63.e6. Bhaduri A, Di Lullo E, Jung D, Müller S, Crouch EE, Espinosa CS, Ozawa T, Alvarado B, Spatazza J, Cadwell CR, Wilkins G, Velmeshev D, Liu SJ, Malatesta M, Andrews MG, Mostajo-Radji MA, Huang EJ, Nowakowski TJ, Lim DA, Diaz A, Raleigh DR, Kriegstein AR. PMID: 31901251.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansCells
    25. Disruptive mutations in TANC2 define a neurodevelopmental syndrome associated with psychiatric disorders. Nat Commun. 2019 10 15; 10(1):4679. Guo H, Bettella E, Marcogliese PC, Zhao R, Andrews JC, Nowakowski TJ, Gillentine MA, Hoekzema K, Wang T, Wu H, Jangam S, Liu C, Ni H, Willemsen MH, van Bon BW, Rinne T, Stevens SJC, Kleefstra T, Brunner HG, Yntema HG, Long M, Zhao W, Hu Z, Colson C, Richard N, Schwartz CE, Romano C, Castiglia L, Bottitta M, Dhar SU, Erwin DJ, Emrick L, Keren B, Afenjar A, Zhu B, Bai B, Stankiewicz P, Herman K, University of Washington Center for Mendelian Genomics , Mercimek-Andrews S, Juusola J, Wilfert AB, Abou Jamra R, Büttner B, Mefford HC, Muir AM, Scheffer IE, Regan BM, Malone S, Gecz J, Cobben J, Weiss MM, Waisfisz Q, Bijlsma EK, Hoffer MJV, Ruivenkamp CAL, Sartori S, Xia F, Rosenfeld JA, Bernier RA, Wangler MF, Yamamoto S, Xia K, Stegmann APA, Bellen HJ, Murgia A, Eichler EE. PMID: 31616000.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansAnimalsCells
    26. Development and Arealization of the Cerebral Cortex. Neuron. 2019 09 25; 103(6):980-1004. Cadwell CR, Bhaduri A, Mostajo-Radji MA, Keefe MG, Nowakowski TJ. PMID: 31557462.
      View in: PubMed   Mentions: 33     Fields:    Translation:HumansAnimalsCells
    27. Human brain development through the lens of cerebral organoid models. Brain Res. 2019 12 15; 1725:146470. Andrews MG, Nowakowski TJ. PMID: 31542572.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansAnimalsCells
    28. A recipe book for cell types in the human brain. Nature. 2019 09; 573(7772):36-37. Keefe MG, Nowakowski TJ. PMID: 31481767.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimals
    29. Automated four-dimensional long term imaging enables single cell tracking within organotypic brain slices to study neurodevelopment and degeneration. Commun Biol. 2019; 2:155. Linsley JW, Tripathi A, Epstein I, Schmunk G, Mount E, Campioni M, Oza V, Barch M, Javaherian A, Nowakowski TJ, Samsi S, Finkbeiner S. PMID: 31069265.
      View in: PubMed   Mentions: 6  Translation:HumansAnimalsCells
    30. Multimodal Single-Cell Analysis Reveals Physiological Maturation in the Developing Human Neocortex. Neuron. 2019 04 03; 102(1):143-158.e7. Mayer S, Chen J, Velmeshev D, Mayer A, Eze UC, Bhaduri A, Cunha CE, Jung D, Arjun A, Li E, Alvarado B, Wang S, Lovegren N, Gonzales ML, Szpankowski L, Leyrat A, West JAA, Panagiotakos G, Alvarez-Buylla A, Paredes MF, Nowakowski TJ, Pollen AA, Kriegstein AR. PMID: 30770253; PMCID: PMC7648658.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansAnimalsCells
    31. Establishing Cerebral Organoids as Models of Human-Specific Brain Evolution. Cell. 2019 02 07; 176(4):743-756.e17. Pollen AA, Bhaduri A, Andrews MG, Nowakowski TJ, Meyerson OS, Mostajo-Radji MA, Di Lullo E, Alvarado B, Bedolli M, Dougherty ML, Fiddes IT, Kronenberg ZN, Shuga J, Leyrat AA, West JA, Bershteyn M, Lowe CB, Pavlovic BJ, Salama SR, Haussler D, Eichler EE, Kriegstein AR. PMID: 30735633; PMCID: PMC6544371.
      View in: PubMed   Mentions: 101     Fields:    Translation:HumansAnimalsCells
    32. Mafb and c-Maf Have Prenatal Compensatory and Postnatal Antagonistic Roles in Cortical Interneuron Fate and Function. Cell Rep. 2019 01 29; 26(5):1157-1173.e5. Pai EL, Vogt D, Clemente-Perez A, McKinsey GL, Cho FS, Hu JS, Wimer M, Paul A, Fazel Darbandi S, Pla R, Nowakowski TJ, Goodrich LV, Paz JT, Rubenstein JLR. PMID: 30699346.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCells
    33. Neuroserpin expression during human brain development and in adult brain revealed by immunohistochemistry and single cell RNA sequencing. J Anat. 2019 09; 235(3):543-554. Adorjan I, Tyler T, Bhaduri A, Demharter S, Finszter CK, Bako M, Sebok OM, Nowakowski TJ, Khodosevich K, Møllgård K, Kriegstein AR, Shi L, Hoerder-Suabedissen A, Ansorge O, Molnár Z. PMID: 30644551.
      View in: PubMed   Mentions: 8     Fields:    Translation:Humans
    34. Regulation of cell-type-specific transcriptomes by microRNA networks during human brain development. Nat Neurosci. 2018 12; 21(12):1784-1792. Nowakowski TJ, Rani N, Golkaram M, Zhou HR, Alvarado B, Huch K, West JA, Leyrat A, Pollen AA, Kriegstein AR, Petzold LR, Kosik KS. PMID: 30455455.
      View in: PubMed   Mentions: 30     Fields:    Translation:HumansCells
    35. Single-cell sequencing paints diverse pictures of the brain. Nature. 2018 11; 563(7729):38-39. Bhaduri A, Nowakowski TJ. PMID: 30382219.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    36. Building blocks of the human brain. Science. 2018 Oct 12; 362(6411):169. Nowakowski TJ. PMID: 30309940.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    37. Identification of cell types in a mouse brain single-cell atlas using low sampling coverage. BMC Biol. 2018 10 11; 16(1):113. Bhaduri A, Nowakowski TJ, Pollen AA, Kriegstein AR. PMID: 30309354.
      View in: PubMed   Mentions: 5     Fields:    Translation:Animals
    38. Transcriptional fates of human-specific segmental duplications in brain. Genome Res. 2018 10; 28(10):1566-1576. Dougherty ML, Underwood JG, Nelson BJ, Tseng E, Munson KM, Penn O, Nowakowski TJ, Pollen AA, Eichler EE. PMID: 30228200.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansCells
    39. The Psychiatric Cell Map Initiative: A Convergent Systems Biological Approach to Illuminating Key Molecular Pathways in Neuropsychiatric Disorders. Cell. 2018 07 26; 174(3):505-520. Willsey AJ, Morris MT, Wang S, Willsey HR, Sun N, Teerikorpi N, Baum TB, Cagney G, Bender KJ, Desai TA, Srivastava D, Davis GW, Doudna J, Chang E, Sohal V, Lowenstein DH, Li H, Agard D, Keiser MJ, Shoichet B, von Zastrow M, Mucke L, Finkbeiner S, Gan L, Sestan N, Ward ME, Huttenhain R, Nowakowski TJ, Bellen HJ, Frank LM, Khokha MK, Lifton RP, Kampmann M, Ideker T, State MW, Krogan NJ. PMID: 30053424; PMCID: PMC6247911.
      View in: PubMed   Mentions: 36     Fields:    Translation:Humans
    40. Human-Specific NOTCH2NL Genes Affect Notch Signaling and Cortical Neurogenesis. Cell. 2018 05 31; 173(6):1356-1369.e22. Fiddes IT, Lodewijk GA, Mooring M, Bosworth CM, Ewing AD, Mantalas GL, Novak AM, van den Bout A, Bishara A, Rosenkrantz JL, Lorig-Roach R, Field AR, Haeussler M, Russo L, Bhaduri A, Nowakowski TJ, Pollen AA, Dougherty ML, Nuttle X, Addor MC, Zwolinski S, Katzman S, Kriegstein A, Eichler EE, Salama SR, Jacobs FMJ, Haussler D. PMID: 29856954; PMCID: PMC5986104.
      View in: PubMed   Mentions: 94     Fields:    Translation:HumansAnimalsCells
    41. An analytical framework for whole-genome sequence association studies and its implications for autism spectrum disorder. Nat Genet. 2018 04 26; 50(5):727-736. Werling DM, Brand H, An JY, Stone MR, Zhu L, Glessner JT, Collins RL, Dong S, Layer RM, Markenscoff-Papadimitriou E, Farrell A, Schwartz GB, Wang HZ, Currall BB, Zhao X, Dea J, Duhn C, Erdman CA, Gilson MC, Yadav R, Handsaker RE, Kashin S, Klei L, Mandell JD, Nowakowski TJ, Liu Y, Pochareddy S, Smith L, Walker MF, Waterman MJ, He X, Kriegstein AR, Rubenstein JL, Sestan N, McCarroll SA, Neale BM, Coon H, Willsey AJ, Buxbaum JD, Daly MJ, State MW, Quinlan AR, Marth GT, Roeder K, Devlin B, Talkowski ME, Sanders SJ. PMID: 29700473; PMCID: PMC5961723.
      View in: PubMed   Mentions: 65     Fields:    Translation:Humans
    42. Evolution of New miRNAs and Cerebro-Cortical Development. Annu Rev Neurosci. 2018 07 08; 41:119-137. Kosik KS, Nowakowski T. PMID: 29618285.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansAnimals
    43. Spatiotemporal gene expression trajectories reveal developmental hierarchies of the human cortex. Science. 2017 12 08; 358(6368):1318-1323. Hanna RF, Ward TJ, Chow DS, Lagana SM, Moreira RK, Emond JC, Weintraub JL, Prince MR, Nowakowski TJ, Bhaduri A, Pollen AA, Alvarado B, Mostajo-Radji MA, Di Lullo E, Haeussler M, Sandoval-Espinosa C, Liu SJ, Velmeshev D, Ounadjela JR, Shuga J, Wang X, Lim DA, West JA, Leyrat AA, Kent WJ, Kriegstein AR. PMID: 29217575; PMCID: PMC5991609.
      View in: PubMed   Mentions: 181     Fields:    Translation:HumansCells
    44. The impact of microRNAs on transcriptional heterogeneity and gene co-expression across single embryonic stem cells. Nat Commun. 2017 01 19; 8:14126. Gambardella G, Carissimo A, Chen A, Cutillo L, Nowakowski TJ, di Bernardo D, Blelloch R. PMID: 28102192; PMCID: PMC5253645.
      View in: PubMed   Mentions: 13     Fields:    Translation:AnimalsCells
    45. Human iPSC-Derived Cerebral Organoids Model Cellular Features of Lissencephaly and Reveal Prolonged Mitosis of Outer Radial Glia. Cell Stem Cell. 2017 04 06; 20(4):435-449.e4. Bershteyn M, Nowakowski TJ, Pollen AA, Di Lullo E, Nene A, Wynshaw-Boris A, Kriegstein AR. PMID: 28111201.
      View in: PubMed   Mentions: 142     Fields:    Translation:HumansCells
    46. Zika virus cell tropism in the developing human brain and inhibition by azithromycin. Proc Natl Acad Sci U S A. 2016 12 13; 113(50):14408-14413. Retallack H, Di Lullo E, Arias C, Knopp KA, Laurie MT, Sandoval-Espinosa C, Mancia Leon WR, Krencik R, Ullian EM, Spatazza J, Pollen AA, Mandel-Brehm C, Nowakowski TJ, Kriegstein AR, DeRisi JL. PMID: 27911847.
      View in: PubMed   Mentions: 190     Fields:    Translation:HumansCells
    47. Single-cell sequencing maps gene expression to mutational phylogenies in PDGF- and EGF-driven gliomas. Mol Syst Biol. 2016 Nov 25; 12(11):889. Müller S, Liu SJ, Di Lullo E, Malatesta M, Pollen AA, Nowakowski TJ, Kohanbash G, Aghi M, Kriegstein AR, Lim DA, Diaz A. PMID: 27888226.
      View in: PubMed   Mentions: 39     Fields:    Translation:Humans
    48. Transformation of the Radial Glia Scaffold Demarcates Two Stages of Human Cerebral Cortex Development. Neuron. 2016 Sep 21; 91(6):1219-1227. Nowakowski TJ, Pollen AA, Sandoval-Espinosa C, Kriegstein AR. PMID: 27657449.
      View in: PubMed   Mentions: 80     Fields:    Translation:HumansCells
    49. A Primate lncRNA Mediates Notch Signaling during Neuronal Development by Sequestering miRNA. Neuron. 2016 06 15; 90(6):1174-1188. Rani N, Nowakowski TJ, Zhou H, Godshalk SE, Lisi V, Kriegstein AR, Kosik KS. PMID: 27263970.
      View in: PubMed   Mentions: 46     Fields:    Translation:HumansAnimalsCells
    50. SCell: integrated analysis of single-cell RNA-seq data. Bioinformatics. 2016 07 15; 32(14):2219-20. Diaz A, Liu SJ, Sandoval C, Pollen A, Nowakowski TJ, Lim DA, Kriegstein A, Diaz A, Liu SJ, Sandoval C, Pollen A, Nowakowski TJ, Lim DA, Kriegstein A. PMID: 27153637; PMCID: PMC4937196.
      View in: PubMed   Mentions: 20     Fields:    
    51. Single-cell analysis of long non-coding RNAs in the developing human neocortex. Genome Biol. 2016 Apr 14; 17:67. Liu SJ, Nowakowski TJ, Pollen AA, Lui JH, Horlbeck MA, Attenello FJ, He D, Weissman JS, Kriegstein AR, Diaz AA, Lim DA, Liu SJ, Nowakowski TJ, Pollen AA, Lui JH, Horlbeck MA, Attenello FJ, He D, Weissman JS, Kriegstein AR, Diaz AA, Lim DA. PMID: 27081004; PMCID: PMC4831157.
      View in: PubMed   Mentions: 107     Fields:    Translation:HumansCells
    52. Expression Analysis Highlights AXL as a Candidate Zika Virus Entry Receptor in Neural Stem Cells. Cell Stem Cell. 2016 05 05; 18(5):591-6. Nowakowski TJ, Pollen AA, Di Lullo E, Sandoval-Espinosa C, Bershteyn M, Kriegstein AR, Nowakowski TJ, Pollen AA, Di Lullo E, Sandoval-Espinosa C, Bershteyn M, Kriegstein AR. PMID: 27038591; PMCID: PMC4860115.
      View in: PubMed   Mentions: 212     Fields:    Translation:AnimalsCells
    53. Molecular identity of human outer radial glia during cortical development. Cell. 2015 Sep 24; 163(1):55-67. Pollen AA, Nowakowski TJ, Chen J, Retallack H, Sandoval-Espinosa C, Nicholas CR, Shuga J, Liu SJ, Oldham MC, Diaz A, Lim DA, Leyrat AA, West JA, Kriegstein AR, Pollen AA, Nowakowski TJ, Chen J, Retallack H, Sandoval-Espinosa C, Nicholas CR, Shuga J, Liu SJ, Oldham MC, Diaz A, Lim DA, Leyrat AA, West JA, Kriegstein AR. PMID: 26406371; PMCID: PMC4583716.
      View in: PubMed   Mentions: 226     Fields:    Translation:HumansAnimalsCells
    54. The long noncoding RNA Pnky regulates neuronal differentiation of embryonic and postnatal neural stem cells. Cell Stem Cell. 2015 Apr 02; 16(4):439-447. Ramos AD, Andersen RE, Liu SJ, Nowakowski TJ, Hong SJ, Gertz C, Salinas RD, Zarabi H, Kriegstein AR, Lim DA, Ramos AD, Andersen RE, Liu SJ, Nowakowski TJ, Hong SJ, Gertz C, Salinas RD, Zarabi H, Kriegstein AR, Lim DA. PMID: 25800779; PMCID: PMC4388801.
      View in: PubMed   Mentions: 130     Fields:    Translation:HumansAnimalsCells
    55. Radial glia require PDGFD-PDGFRβ signalling in human but not mouse neocortex. Nature. 2014 Nov 13; 515(7526):264-8. Lui JH, Nowakowski TJ, Pollen AA, Javaherian A, Kriegstein AR, Oldham MC, Lui JH, Nowakowski TJ, Pollen AA, Javaherian A, Kriegstein AR, Oldham MC. PMID: 25391964; PMCID: PMC4231536.
      View in: PubMed   Mentions: 63     Fields:    Translation:HumansAnimalsCells
    56. Low-coverage single-cell mRNA sequencing reveals cellular heterogeneity and activated signaling pathways in developing cerebral cortex. Nat Biotechnol. 2014 Oct; 32(10):1053-8. Pollen AA, Nowakowski TJ, Shuga J, Wang X, Leyrat AA, Lui JH, Li N, Szpankowski L, Fowler B, Chen P, Ramalingam N, Sun G, Thu M, Norris M, Lebofsky R, Toppani D, Kemp DW, Wong M, Clerkson B, Jones BN, Wu S, Knutsson L, Alvarado B, Wang J, Weaver LS, May AP, Jones RC, Unger MA, Kriegstein AR, West JA, Pollen AA, Nowakowski TJ, Shuga J, Wang X, Leyrat AA, Lui JH, Li N, Szpankowski L, Fowler B, Chen P, Ramalingam N, Sun G, Thu M, Norris M, Lebofsky R, Toppani D, Kemp DW, Wong M, Clerkson B, Jones BN, Wu S, Knutsson L, Alvarado B, Wang J, Weaver LS, May AP, Jones RC, Unger MA, Kriegstein AR, West JA. PMID: 25086649; PMCID: PMC4191988.
      View in: PubMed   Mentions: 295     Fields:    Translation:HumansAnimalsCells
    57. Loss of functional Dicer in mouse radial glia cell-autonomously prolongs cortical neurogenesis. Dev Biol. 2013 Oct 15; 382(2):530-7. Nowakowski TJ, Mysiak KS, O'Leary T, Fotaki V, Pratt T, Price DJ, Nowakowski TJ, Mysiak KS, O'Leary T, Fotaki V, Pratt T, Price DJ. PMID: 24012747; PMCID: PMC3793872.
      View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells
    58. MicroRNA-92b regulates the development of intermediate cortical progenitors in embryonic mouse brain. Proc Natl Acad Sci U S A. 2013 Apr 23; 110(17):7056-61. Nowakowski TJ, Fotaki V, Pollock A, Sun T, Pratt T, Price DJ, Nowakowski TJ, Fotaki V, Pollock A, Sun T, Pratt T, Price DJ. PMID: 23569256; PMCID: PMC3637761.
      View in: PubMed   Mentions: 48     Fields:    Translation:AnimalsCells
    59. The expression and activity of β-catenin in the thalamus and its projections to the cerebral cortex in the mouse embryo. BMC Neurosci. 2012 Feb 23; 13:20. Pratt T, Davey JW, Nowakowski TJ, Raasumaa C, Rawlik K, McBride D, Clinton M, Mason JO, Price DJ, Pratt T, Davey JW, Nowakowski TJ, Raasumaa C, Rawlik K, McBride D, Clinton M, Mason JO, Price DJ. PMID: 22360971; PMCID: PMC3347985.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    60. Functional dicer is necessary for appropriate specification of radial glia during early development of mouse telencephalon. PLoS One. 2011; 6(8):e23013. Nowakowski TJ, Mysiak KS, Pratt T, Price DJ, Nowakowski TJ, Mysiak KS, Pratt T, Price DJ. PMID: 21826226; PMCID: PMC3149632.
      View in: PubMed   Mentions: 27     Fields:    Translation:AnimalsCells
    61. Novel lines of Pax6-/- embryonic stem cells exhibit reduced neurogenic capacity without loss of viability. BMC Neurosci. 2010 Feb 24; 11:26. Quinn JC, Molinek M, Nowakowski TJ, Mason JO, Price DJ, Quinn JC, Molinek M, Nowakowski TJ, Mason JO, Price DJ. PMID: 20178645; PMCID: PMC2837049.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    62. Time-Multiplexed Laguerre-Gaussian holographic optical tweezers for biological applications. Opt Express. 2006 Apr 03; 14(7):3065-72. Lafong A, Hossack WJ, Arlt J, Nowakowski TJ, Read ND, Lafong A, Hossack WJ, Arlt J, Nowakowski TJ, Read ND. PMID: 19516447.
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