Tomasz Nowakowski, PhD

Title(s)Associate Professor, Neurological Surgery
SchoolSchool of Medicine
PronounsHe/Him/His
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    1. An enhancer-AAV toolbox to target and manipulate distinct interneuron subtypes. bioRxiv. 2025 Mar 18. Furlanis E, Dai M, Leyva Garcia B, Vergara J, Tran T, Pereira A, Gorissen BL, Wills S, Vlachos A, Hairston A, Dwivedi D, Du S, McMahon J, Huang S, Morabito A, Vazquez A, Kim S, Lee AT, Chang EF, Razzaq T, Qazi A, Vargish G, Yuan X, Caccavano A, Hunt S, Chittajallu R, McLean N, Hewitt L, Paranzino E, Rice H, Cummins AC, Plotnikova A, Mohanty A, Tangen AC, Shin JH, Azadi R, Eldridge MAG, Alvarez VA, Averbeck BB, Alyahyay M, Reyes Vallejo T, Soheib M, Vattino LG, MacGregor CP, Chatain CP, Banks E, Olah VJ, Naskar S, Hill S, Liebergall S, Badiani R, Hyde L, Hanley E, Xu Q, Allaway KC, Goldberg EM, Rowan MJM, Nowakowski TJ, Lee S, Favuzzi E, Kaeser PS, Sjulson L, Batista-Brito R, Takesian AE, Ibrahim LA, Iqbal A, Pelkey KA, McBain CJ, Dimidschstein J, Fishell G, Wang Y. PMID: 39091835; PMCID: PMC11291062.
      View in: PubMed   Mentions:
    2. Exploring human brain development and disease using assembloids. Neuron. 2025 Mar 11. Wu SR, Nowakowski TJ. PMID: 40107269.
      View in: PubMed   Mentions:
    3. Author Correction: Opportunities and challenges of single-cell and spatially resolved genomics methods for neuroscience discovery. Nat Neurosci. 2025 Jan; 28(1):216. Bonev B, Castelo-Branco G, Chen F, Codeluppi S, Corces MR, Fan J, Heiman M, Harris K, Inoue F, Kellis M, Levine A, Lotfollahi M, Luo C, Maynard KR, Nitzan M, Ramani V, Satijia R, Schirmer L, Shen Y, Sun N, Green GS, Theis F, Wang X, Welch JD, Gokce O, Konopka G, Liddelow S, Macosko E, Ali Bayraktar O, Habib N, Nowakowski TJ. PMID: 39681663.
      View in: PubMed   Mentions:    Fields:    
    4. Multiscale Cloud-Based Pipeline for Neuronal Electrophysiology Analysis and Visualization. bioRxiv. 2024 Dec 14. Geng J, Voitiuk K, Parks DF, Robbins A, Spaeth A, Sevetson JL, Hernandez S, Schweiger HE, Andrews JP, Seiler ST, Elliott MAT, Chang EF, Nowakowski TJ, Currie R, Mostajo-Radji MA, Haussler D, Sharf T, Salama SR, Teodorescu M. PMID: 39605518; PMCID: PMC11601321.
      View in: PubMed   Mentions:
    5. High-Complexity Barcoded Rabies Virus for Scalable Circuit Mapping Using Single-Cell and Single-Nucleus Sequencing. bioRxiv. 2024 Dec 11. Shin D, Urbanek ME, Larson HH, Moussa AJ, Lee KY, Baker DL, Standen-Bloom E, Ramachandran S, Bogdanoff D, Cadwell CR, Nowakowski TJ. PMID: 39713304; PMCID: PMC11661106.
      View in: PubMed   Mentions:
    6. Applying single-cell and single-nucleus genomics to studies of cellular heterogeneity and cell fate transitions in the nervous system. Nat Neurosci. 2024 Dec; 27(12):2278-2291. Adameyko I, Bakken T, Bhaduri A, Chhatbar C, Filbin MG, Gate D, Hochgerner H, Kim CN, Krull J, La Manno G, Li Q, Linnarsson S, Ma Q, Mayer C, Menon V, Nano P, Prinz M, Quake S, Walsh CA, Yang J, Bayraktar OA, Gokce O, Habib N, Konopka G, Liddelow SA, Nowakowski TJ. PMID: 39627588; PMCID: PMC11949301.
      View in: PubMed   Mentions:    Fields:    
    7. Opportunities and challenges of single-cell and spatially resolved genomics methods for neuroscience discovery. Nat Neurosci. 2024 Dec; 27(12):2292-2309. Bonev B, Castelo-Branco G, Chen F, Codeluppi S, Corces MR, Fan J, Heiman M, Harris K, Inoue F, Kellis M, Levine A, Lotfollahi M, Luo C, Maynard KR, Nitzan M, Ramani V, Satijia R, Schirmer L, Shen Y, Sun N, Green GS, Theis F, Wang X, Welch JD, Gokce O, Konopka G, Liddelow S, Macosko E, Ali Bayraktar O, Habib N, Nowakowski TJ. PMID: 39627587.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    8. Implementation and validation of single-cell genomics experiments in neuroscience. Nat Neurosci. 2024 Dec; 27(12):2310-2325. Colonna M, Konopka G, Liddelow SA, Nowakowski T, Awatramani R, Bateup HS, Cadwell CR, Caglayan E, Chen JL, Gillis J, Kampmann M, Krienen F, Marsh SE, Monje M, O'Dea MR, Patani R, Pollen AA, Quintana FJ, Scavuzzo M, Schmitz M, Sloan SA, Tesar PJ, Tollkuhn J, Tosches MA, Urbanek ME, Werner JM, Bayraktar OA, Gokce O, Habib N. PMID: 39627589.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    9. An organotypic atlas of human vascular cells. Nat Med. 2024 Dec; 30(12):3468-3481. Barnett SN, Cujba AM, Yang L, Maceiras AR, Li S, Kedlian VR, Pett JP, Polanski K, Miranda AMA, Xu C, Cranley J, Kanemaru K, Lee M, Mach L, Perera S, Tudor C, Joseph PD, Pritchard S, Toscano-Rivalta R, Tuong ZK, Bolt L, Petryszak R, Prete M, Cakir B, Huseynov A, Sarropoulos I, Chowdhury RA, Elmentaite R, Madissoon E, Oliver AJ, Campos L, Brazovskaja A, Gomes T, Treutlein B, Kim CN, Nowakowski TJ, Meyer KB, Randi AM, Noseda M, Teichmann SA. PMID: 39566559; PMCID: PMC11645277.
      View in: PubMed   Mentions:    Fields:    
    10. CRISPRi-based screen of Autism Spectrum Disorder risk genes in microglia uncovers roles of ADNP in microglia endocytosis and synaptic pruning. bioRxiv. 2024 Nov 17. Teter OM, McQuade A, Hagan V, Liang W, Dräger NM, Sattler SM, Holmes BB, Castillo VC, Papakis V, Leng K, Boggess S, Nowakowski TJ, Wells J, Kampmann M. PMID: 39605704; PMCID: PMC11601228.
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    11. Multimodal evaluation of network activity and optogenetic interventions in human hippocampal slices. Nat Neurosci. 2024 Dec; 27(12):2487-2499. Andrews JP, Geng J, Voitiuk K, Elliott MAT, Shin D, Robbins A, Spaeth A, Wang A, Li L, Solis D, Keefe MG, Sevetson JL, Rivera de Jesús JA, Donohue KC, Larson HH, Ehrlich D, Auguste KI, Salama S, Sohal V, Sharf T, Haussler D, Cadwell CR, Schaffer DV, Chang EF, Teodorescu M, Nowakowski TJ. PMID: 39548326; PMCID: PMC11881784.
      View in: PubMed   Mentions: 4     Fields:    
    12. Pathological microcircuits initiate epileptiform events in patient hippocampal slices. bioRxiv. 2024 Nov 14. Elliott MAT, Andrews JP, van der Molen T, Geng J, Spaeth A, Voituik K, Core C, Gillespie T, Sinervo A, Parks DF, Robbins A, Solís D, Chang EF, Nowakowski TJ, Teodorescu M, Haussler D, Sharf T. PMID: 39605666; PMCID: PMC11601452.
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    13. Group 2 innate lymphoid cells promote inhibitory synapse development and social behavior. Science. 2024 11; 386(6721):eadi1025. Barron JJ, Mroz NM, Taloma SE, Dahlgren MW, Ortiz-Carpena JF, Keefe MG, Escoubas CC, Dorman LC, Vainchtein ID, Chiaranunt P, Kotas ME, Nowakowski TJ, Bender KJ, Molofsky AB, Molofsky AV. PMID: 39480923; PMCID: PMC11995778.
      View in: PubMed   Mentions: 1     Fields:    
    14. Microglia regulate GABAergic neurogenesis in prenatal human brain through IGF1. bioRxiv. 2024 Oct 20. Yu D, Jain S, Wangzhou A, De Florencio S, Zhu B, Kim JY, Choi JJ, Paredes MF, Nowakowski TJ, Huang EJ, Piao X. PMID: 39464051; PMCID: PMC11507959.
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    15. Adhesion G protein-coupled receptor ADGRG1 promotes protective microglial response in Alzheimer's disease. bioRxiv. 2024 Oct 18. Zhu B, Wangzhou A, Yu D, Li T, Schmidt R, De Florencio SL, Chao L, Perez Y, Grinberg LT, Spina S, Ransohoff RM, Kriegstein AR, Seeley WW, Nowakowski T, Piao X. PMID: 39464012; PMCID: PMC11507791.
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    16. Temporally distinct 3D multi-omic dynamics in the developing human brain. Nature. 2024 Nov; 635(8038):481-489. Heffel MG, Zhou J, Zhang Y, Lee DS, Hou K, Pastor-Alonso O, Abuhanna KD, Galasso J, Kern C, Tai CY, Garcia-Padilla C, Nafisi M, Zhou Y, Schmitt AD, Li T, Haeussler M, Wick B, Zhang MJ, Xie F, Ziffra RS, Mukamel EA, Eskin E, Nowakowski TJ, Dixon JR, Pasaniuc B, Ecker JR, Zhu Q, Bintu B, Paredes MF, Luo C. PMID: 39385032; PMCID: PMC11560841.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    17. MAGIC matrices: freeform bioprinting materials to support complex and reproducible organoid morphogenesis. bioRxiv. 2024 Oct 09. Graham AJ, Khoo MWL, Srivastava V, Viragova S, Kim H, Parekh K, Hennick KM, Bird M, Goldhammer N, Yu JZ, Morley CD, Lebel P, Kumar S, Rosenbluth JM, Nowakowski TJ, Klein O, Gómez-Sjöberg R, Gartner ZJ. PMID: 38370663; PMCID: PMC10871257.
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    18. Ciliary biology intersects autism and congenital heart disease. bioRxiv. 2024 Jul 31. Teerikorpi N, Lasser MC, Wang S, Kostyanovskaya E, Bader E, Sun N, Dea J, Nowakowski TJ, Willsey AJ, Willsey HR. PMID: 39131273; PMCID: PMC11312554.
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    19. Large-scale neurophysiology and single-cell profiling in human neuroscience. Nature. 2024 Jun; 630(8017):587-595. Lee AT, Chang EF, Paredes MF, Nowakowski TJ. PMID: 38898291.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimalsCells
    20. Massively parallel characterization of regulatory elements in the developing human cortex. Science. 2024 May 24; 384(6698):eadh0559. Deng C, Whalen S, Steyert M, Ziffra R, Przytycki PF, Inoue F, Pereira DA, Capauto D, Norton S, Vaccarino FM, PsychENCODE Consortium‡, Pollen AA, Nowakowski TJ, Ahituv N, Pollard KS, PsychENCODE Consortium. PMID: 38781390.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    21. Type-I-interferon-responsive microglia shape cortical development and behavior. Cell. 2024 Apr 11; 187(8):1936-1954.e24. Escoubas CC, Dorman LC, Nguyen PT, Lagares-Linares C, Nakajo H, Anderson SR, Barron JJ, Wade SD, Cuevas B, Vainchtein ID, Silva NJ, Guajardo R, Xiao Y, Lidsky PV, Wang EY, Rivera BM, Taloma SE, Kim DK, Kaminskaya E, Nakao-Inoue H, Schwer B, Arnold TD, Molofsky AB, Condello C, Andino R, Nowakowski TJ, Molofsky AV. PMID: 38490196; PMCID: PMC11015974.
      View in: PubMed   Mentions: 11     Fields:    Translation:AnimalsCells
    22. Thalamocortical organoids enable in vitro modeling of 22q11.2 microdeletion associated with neuropsychiatric disorders. Cell Stem Cell. 2024 03 07; 31(3):421-432.e8. Shin D, Kim CN, Ross J, Hennick KM, Wu SR, Paranjape N, Leonard R, Wang JC, Keefe MG, Pavlovic BJ, Donohue KC, Moreau C, Wigdor EM, Larson HH, Allen DE, Cadwell CR, Bhaduri A, Popova G, Bearden CE, Pollen AA, Jacquemont S, Sanders SJ, Haussler D, Wiita AP, Frost NA, Sohal VS, Nowakowski TJ. PMID: 38382530; PMCID: PMC10939828.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    23. A foundational atlas of autism protein interactions reveals molecular convergence. bioRxiv. 2024 Feb 08. Wang B, Vartak R, Zaltsman Y, Naing ZZC, Hennick KM, Polacco BJ, Bashir A, Eckhardt M, Bouhaddou M, Xu J, Sun N, Lasser MC, Zhou Y, McKetney J, Guiley KZ, Chan U, Kaye JA, Chadha N, Cakir M, Gordon M, Khare P, Drake S, Drury V, Burke DF, Gonzalez S, Alkhairy S, Thomas R, Lam S, Morris M, Bader E, Seyler M, Baum T, Krasnoff R, Wang S, Pham P, Arbalaez J, Pratt D, Chag S, Mahmood N, Rolland T, Bourgeron T, Finkbeiner S, Swaney DL, Bandyopadhay S, Ideker T, Beltrao P, Willsey HR, Obernier K, Nowakowski TJ, Hüttenhain R, State MW, Willsey AJ, Krogan NJ. PMID: 38076945; PMCID: PMC10705567.
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    24. Optimal trade-off control in machine learning-based library design, with application to adeno-associated virus (AAV) for gene therapy. Sci Adv. 2024 Jan 26; 10(4):eadj3786. Zhu D, Brookes DH, Busia A, Carneiro A, Fannjiang C, Popova G, Shin D, Donohue KC, Lin LF, Miller ZM, Williams ER, Chang EF, Nowakowski TJ, Listgarten J, Schaffer DV. PMID: 38266077; PMCID: PMC10807795.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansCells
    25. Improving cellular diversity in human cerebellar organoids. Cell Stem Cell. 2024 01 04; 31(1):3-4. Steyert M, Nowakowski T. PMID: 38181748.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    26. Spatiotemporal molecular dynamics of the developing human thalamus. Science. 2023 10 13; 382(6667):eadf9941. Kim CN, Shin D, Wang A, Nowakowski TJ. PMID: 37824646; PMCID: PMC10758299.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    27. Single-cell analysis of prenatal and postnatal human cortical development. Science. 2023 10 13; 382(6667):eadf0834. Velmeshev D, Perez Y, Yan Z, Valencia JE, Castaneda-Castellanos DR, Wang L, Schirmer L, Mayer S, Wick B, Wang S, Nowakowski TJ, Paredes M, Huang EJ, Kriegstein AR. PMID: 37824647; PMCID: PMC11005279.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansCells
    28. Rubella virus tropism and single-cell responses in human primary tissue and microglia-containing organoids. Elife. 2023 07 20; 12. Popova G, Retallack H, Kim CN, Wang A, Shin D, DeRisi JL, Nowakowski T. PMID: 37470786; PMCID: PMC10370260.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    29. Three-dimensional genome rewiring in loci with human accelerated regions. Science. 2023 04 28; 380(6643):eabm1696. Keough KC, Whalen S, Inoue F, Przytycki PF, Fair T, Deng C, Steyert M, Ryu H, Lindblad-Toh K, Karlsson E, Zoonomia Consortium§, Nowakowski T, Ahituv N, Pollen A, Pollard KS. PMID: 37104607; PMCID: PMC10999243.
      View in: PubMed   Mentions: 27     Fields:    Translation:HumansAnimalsCells
    30. 385 A Cell Resolution Atlas of the Human Cerebrovasculature Reveals Angiogenic and Inflammatory Cell Programs in Arteriovenous Malformations. Neurosurgery. 2023 Apr 1; 69(Supplement_1):69-69. Winkler WE, Kim KC, Ross RJ, Garcia GJ, Gil GE, Oh OI, Chen CL, Wu WD, Catapano CJ, Raygor RK, Narsinh NK, Kim KH, Weinsheimer WS, Cooke CD, Walcott WB, Lawton LM, Gupta GN, Zlokovic ZB, Chang CE, Abla AA, Lim LD, Nowakowski NT. .
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    31. Transcriptomic cell type structures in vivo neuronal activity across multiple timescales. Cell Rep. 2023 04 25; 42(4):112318. Schneider A, Azabou M, McDougall-Vigier L, Parks DF, Ensley S, Bhaskaran-Nair K, Nowakowski T, Dyer EL, Hengen KB. PMID: 36995938; PMCID: PMC10539488.
      View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
    32. Type I interferon responsive microglia shape cortical development and behavior. bioRxiv. 2023 Mar 20. Escoubas CC, Dorman LC, Nguyen PT, Lagares-Linares C, Nakajo H, Anderson SR, Cuevas B, Vainchtein ID, Silva NJ, Xiao Y, Lidsky PV, Wang EY, Taloma SE, Nakao-Inoue H, Schwer B, Andino R, Nowakowski TJ, Molofsky AV. PMID: 35233577; PMCID: PMC8887080.
      View in: PubMed   Mentions:
    33. Massively parallel characterization of psychiatric disorder-associated and cell-type-specific regulatory elements in the developing human cortex. bioRxiv. 2023 Feb 16. Deng C, Whalen S, Steyert M, Ziffra R, Przytycki PF, Inoue F, Pereira DA, Capauto D, Norton S, Vaccarino FM, Pollen A, Nowakowski TJ, Ahituv N, Pollard KS. PMID: 36824845; PMCID: PMC9949039.
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    34. Abstract 52: Prevalence Of Somatic Activating Kras Mutations In Pediatric And Adult Sporadic Brain Arteriovenous Malformations. Stroke. 2023 Feb 1; 54(Suppl_1):a52-a52. Winkler WE, Garcia GJ, Tsang TC, Nelson NJ, McCulloch MC, Weinsheimer WS, Fox FC, Fullerton FH, Ko KN, Su SH, Nowakowski NT, Cooke CD, Hetts HS, Guney GE, PEKMEZCI PM, Tihan TT, Lawton LM, Abla AA, Gupta GN, Kim KH. .
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    35. New York Stem Cell Foundation Robertson Investigators. Cell Stem Cell. 2022 12 01; 29(12):1621-1623. McKinley KL, van Boxtel R, Finley LWS, Peña CJ, Nowakowski TJ. PMID: 36459965.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    36. In preprints: new insights into truncated radial glia. Development. 2022 11 15; 149(22). Steyert M, Nowakowski TJ. PMID: 36382646.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    37. Integrated gene analyses of de novo variants from 46,612 trios with autism and developmental disorders. Proc Natl Acad Sci U S A. 2022 Nov 15; 119(46):e2203491119. Wang T, Kim CN, Bakken TE, Gillentine MA, Henning B, Mao Y, Gilissen C, SPARK Consortium, Nowakowski TJ, Eichler EE. PMID: 36350923; PMCID: PMC9674258.
      View in: PubMed   Mentions: 23     Fields:    Translation:Humans
    38. IoT cloud laboratory: Internet of Things architecture for cellular biology. Internet Things (Amst). 2022 Nov; 20. Parks DF, Voitiuk K, Geng J, Elliott MAT, Keefe MG, Jung EA, Robbins A, Baudin PV, Ly VT, Hawthorne N, Yong D, Sanso SE, Rezaee N, Sevetson JL, Seiler ST, Currie R, Pollen AA, Hengen KB, Nowakowski TJ, Mostajo-Radji MA, Salama SR, Teodorescu M, Haussler D. PMID: 37383277; PMCID: PMC10305744.
      View in: PubMed   Mentions: 8  
    39. Cerebral Organoids as an Experimental Platform for Human Neurogenomics. Cells. 2022 09 08; 11(18). Nowakowski TJ, Salama SR. PMID: 36139380; PMCID: PMC9496777.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansAnimalsCells
    40. Tropism of SARS-CoV-2 for human cortical astrocytes. Proc Natl Acad Sci U S A. 2022 07 26; 119(30):e2122236119. Andrews MG, Mukhtar T, Eze UC, Simoneau CR, Ross J, Parikshak N, Wang S, Zhou L, Koontz M, Velmeshev D, Siebert CV, Gemenes KM, Tabata T, Perez Y, Wang L, Mostajo-Radji MA, de Majo M, Donohue KC, Shin D, Salma J, Pollen AA, Nowakowski TJ, Ullian E, Kumar GR, Winkler EA, Crouch EE, Ott M, Kriegstein AR. PMID: 35858406; PMCID: PMC9335272.
      View in: PubMed   Mentions: 56     Fields:    Translation:HumansCells
    41. Fate mapping of neural stem cell niches reveals distinct origins of human cortical astrocytes. Science. 2022 06 24; 376(6600):1441-1446. Allen DE, Donohue KC, Cadwell CR, Shin D, Keefe MG, Sohal VS, Nowakowski TJ. PMID: 35587512; PMCID: PMC9233096.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansCells
    42. Dissecting cellular diversity of cortical GABAergic cells across multiple modalities: A turning point in neuronal taxonomy. Fac Rev. 2022; 11:13. Arlotta P, Chen F, Lodato S, Margrie TW, Nowakowski TJ, Pederson T, Rico B. PMID: 35719130; PMCID: PMC9190211.
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    43. Microglial GPR56 is the molecular target of maternal immune activation-induced parvalbumin-positive interneuron deficits. Sci Adv. 2022 05 06; 8(18):eabm2545. Yu D, Li T, Delpech JC, Zhu B, Kishore P, Koshi T, Luo R, Pratt KJB, Popova G, Nowakowski TJ, Villeda SA, Piao X. PMID: 35544642; PMCID: PMC9075805.
      View in: PubMed   Mentions: 13     Fields:    Translation:AnimalsCells
    44. The development and evolution of inhibitory neurons in primate cerebrum. Nature. 2022 03; 603(7903):871-877. Schmitz MT, Sandoval K, Chen CP, Mostajo-Radji MA, Seeley WW, Nowakowski TJ, Ye CJ, Paredes MF, Pollen AA. PMID: 35322231; PMCID: PMC8967711.
      View in: PubMed   Mentions: 40     Fields:    Translation:AnimalsCells
    45. A single-cell atlas of the normal and malformed human brain vasculature. Science. 2022 03 04; 375(6584):eabi7377. Winkler EA, Kim CN, Ross JM, Garcia JH, Gil E, Oh I, Chen LQ, Wu D, Catapano JS, Raygor K, Narsinh K, Kim H, Weinsheimer S, Cooke DL, Walcott BP, Lawton MT, Gupta N, Zlokovic BV, Chang EF, Abla AA, Lim DA, Nowakowski TJ. PMID: 35084939; PMCID: PMC8995178.
      View in: PubMed   Mentions: 104     Fields:    Translation:HumansCells
    46. Endoluminal Biopsy for Molecular Profiling of Human Brain Vascular Malformations. Neurology. 2022 04 19; 98(16):e1637-e1647. Winkler E, Wu D, Gil E, McCoy D, Narsinh K, Sun Z, Mueller K, Ross J, Kim H, Weinsheimer S, Berger M, Nowakowski T, Lim D, Abla A, Cooke D. PMID: 35145012; PMCID: PMC9052570.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    47. DynaMorph: self-supervised learning of morphodynamic states of live cells. Mol Biol Cell. 2022 05 15; 33(6):ar59. Wu Z, Chhun BB, Popova G, Guo SM, Kim CN, Yeh LH, Nowakowski T, Zou J, Mehta SB. PMID: 35138913; PMCID: PMC9265147.
      View in: PubMed   Mentions: 13     Fields:    Translation:Humans
    48. Nests of dividing neuroblasts sustain interneuron production for the developing human brain. Science. 2022 01 28; 375(6579):eabk2346. Paredes MF, Mora C, Flores-Ramirez Q, Cebrian-Silla A, Del Dosso A, Larimer P, Chen J, Kang G, Gonzalez Granero S, Garcia E, Chu J, Delgado R, Cotter JA, Tang V, Spatazza J, Obernier K, Ferrer Lozano J, Vento M, Scott J, Studholme C, Nowakowski TJ, Kriegstein AR, Oldham MC, Hasenstaub A, Garcia-Verdugo JM, Alvarez-Buylla A, Huang EJ. PMID: 35084970; PMCID: PMC8887556.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansAnimalsCells
    49. Single-cell delineation of lineage and genetic identity in the mouse brain. Nature. 2022 01; 601(7893):404-409. Bandler RC, Vitali I, Delgado RN, Ho MC, Dvoretskova E, Ibarra Molinas JS, Frazel PW, Mohammadkhani M, Machold R, Maedler S, Liddelow SA, Nowakowski TJ, Fishell G, Mayer C. PMID: 34912118; PMCID: PMC8770128.
      View in: PubMed   Mentions: 58     Fields:    Translation:AnimalsCells
    50. Individual human cortical progenitors can produce excitatory and inhibitory neurons. Nature. 2022 01; 601(7893):397-403. Delgado RN, Allen DE, Keefe MG, Mancia Leon WR, Ziffra RS, Crouch EE, Alvarez-Buylla A, Nowakowski TJ. PMID: 34912114; PMCID: PMC8994470.
      View in: PubMed   Mentions: 48     Fields:    Translation:HumansCells
    51. UCSC Cell Browser: visualize your single-cell data. Bioinformatics. 2021 12 07; 37(23):4578-4580. Speir ML, Bhaduri A, Markov NS, Moreno P, Nowakowski TJ, Papatheodorou I, Pollen AA, Raney BJ, Seninge L, Kent WJ, Haeussler M. PMID: 34244710; PMCID: PMC8652023.
      View in: PubMed   Mentions: 90     Fields:    
    52. Endovascular Biopsy of Vertebrobasilar Aneurysm in Patient With Polyarteritis Nodosa. Front Neurol. 2021; 12:697105. Narsinh KH, Narsinh K, McCoy DB, Sun Z, Halabi C, Meisel K, Tihan T, Chaganti K, Amans MR, Halbach VV, Higashida RT, Hetts SW, Dowd CF, Winkler EA, Abla AA, Nowakowski TJ, Cooke DL. PMID: 34887823; PMCID: PMC8650719.
      View in: PubMed   Mentions: 4  
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    108. Functional dicer is necessary for appropriate specification of radial glia during early development of mouse telencephalon. PLoS One. 2011; 6(8):e23013. Nowakowski TJ, Mysiak KS, Pratt T, Price DJ. PMID: 21826226; PMCID: PMC3149632.
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    110. Time-Multiplexed Laguerre-Gaussian holographic optical tweezers for biological applications. Opt Express. 2006 Apr 03; 14(7):3065-72. Lafong A, Hossack WJ, Arlt J, Nowakowski TJ, Read ND. PMID: 19516447.
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