Shravani Mukherjee, PhD, MSc
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| Title(s) | Associate Researcher, Human Genetics |
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| School | School of Medicine |
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| Address | 513 Parnassus Avenue, MSB, #965
San Francisco CA 94143
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| Phone | -- |
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ORCID
.gif) | 0000-0003-1690-8067  |
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| vCard | Download vCard |
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Biography
| Chan Zuckerberg Biohub, San Francisco | Scientist | 11/2022 | High-throughput Cell Engineering |
| Stanford University, Palo Alto, CA, USA | Postdoc | 08/2020 | Cell Biology |
| CSIR Institute of Genomics & Integrative Biology, Delhi, India | PhD | 09/2016 | Biology |
| Presidency College, University of Calcutta, Kolkata, WB, India | MSc | 07/2009 | Molecular Biology & Genetics |
| Serampore College, University of Calcutta, Serampore, WB, India | BSc | 07/2007 | Zoology (H) |
| Chan Zuckerberg Biohub, Stanford University | 2018
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| 2020 | Single Cell Atlas Pilot Grant |
| CSIR - Council of Scientific & Industrial Research, India | 2013
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| 2016 | CSIR-SRF |
| Ministry of Education, Gov. of India | 2010 | | GATE |
Overview
Interested in single cell biology of complex diseases. Leading translational research and functional genomics studies with both academic and industrial experience in cell based disease models, cell-engineering, single cell omics, high-throughput screening and biomarker assay designs.
Bibliographic
Altmetrics Details
PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media.
(Note that publications are often cited in additional ways that are not shown here.)
Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication.
Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication.
Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.)
Click a Field or Translation tag to filter the publications.
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The Tabula Sapiens: A multiple-organ, single-cell transcriptomic atlas of humans. Science. 2022 05 13; 376(6594):eabl4896.
Tabula Sapiens Consortium*, Jones RC, Karkanias J, Krasnow MA, Pisco AO, Quake SR, Salzman J, Yosef N, Bulthaup B, Brown P, Harper W, Hemenez M, Ponnusamy R, Salehi A, Sanagavarapu BA, Spallino E, Aaron KA, Concepcion W, Gardner JM, Kelly B, Neidlinger N, Wang Z, Crasta S, Kolluru S, Morri M, Tan SY, Travaglini KJ, Xu C, Alcántara-Hernández M, Almanzar N, Antony J, Beyersdorf B, Burhan D, Calcuttawala K, Carter MM, Chan CKF, Chang CA, Chang S, Colville A, Culver RN, Cvijovic I, D'Amato G, Ezran C, Galdos FX, Gillich A, Goodyer WR, Hang Y, Hayashi A, Houshdaran S, Huang X, Irwin JC, Jang S, Juanico JV, Kershner AM, Kim S, Kiss B, Kong W, Kumar ME, Kuo AH, Li B, Loeb GB, Lu WJ, Mantri S, Markovic M, McAlpine PL, de Morree A, Mrouj K, Mukherjee S, Muser T, Neuhöfer P, Nguyen TD, Perez K, Puluca N, Qi Z, Rao P, Raquer-McKay H, Schaum N, Scott B, Seddighzadeh B, Segal J, Sen S, Sikandar S, Spencer SP, Steffes LC, Subramaniam VR, Swarup A, Swift M, Van Treuren W, Trimm E, Veizades S, Vijayakumar S, Vo KC, Vorperian SK, Wang W, Weinstein HNW, Winkler J, Wu TTH, Xie J, Yung AR, Zhang Y, Detweiler AM, Mekonen H, Neff NF, Sit RV, Tan M, Yan J, Bean GR, Charu V, Forgó E, Martin BA, Ozawa MG, Silva O, Toland A, Vemuri VNP, Afik S, Awayan K, Botvinnik OB, Byrne A, Chen M, Dehghannasiri R, Gayoso A, Granados AA, Li Q, Mahmoudabadi G, McGeever A, Olivieri JE, Park M, Ravikumar N, Stanley G, Tan W, Tarashansky AJ, Vanheusden R, Wang P, Wang S, Xing G, Dethlefsen L, Ezran C, Gillich A, Hang Y, Ho PY, Irwin JC, Jang S, Leylek R, Liu S, Maltzman JS, Metzger RJ, Phansalkar R, Sasagawa K, Sinha R, Song H, Swarup A, Trimm E, Veizades S, Wang B, Beachy PA, Clarke MF, Giudice LC, Huang FW, Huang KC, Idoyaga J, Kim SK, Kuo CS, Nguyen P, Rando TA, Red-Horse K, Reiter J, Relman DA, Sonnenburg JL, Wu A, Wu SM, Wyss-Coray T. PMID: 35549404; PMCID: PMC9812260.
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PubMed Mentions:
185 Fields:
Translation:
HumansCells
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Cell types of origin of the cell-free transcriptome. Nat Biotechnol. 2022 06; 40(6):855-861.
Vorperian SK, Moufarrej MN, Tabula Sapiens Consortium, Quake SR. PMID: 35132263; PMCID: PMC9200634.
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PubMed Mentions:
28 Fields:
Translation:
HumansCells
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RNA splicing programs define tissue compartments and cell types at single-cell resolution. Elife. 2021 09 13; 10.
Olivieri JE, Dehghannasiri R, Wang PL, Jang S, de Morree A, Tan SY, Ming J, Ruohao Wu A, Tabula Sapiens Consortium, Quake SR, Krasnow MA, Salzman J. PMID: 34515025; PMCID: PMC8563012.
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PubMed Mentions:
14 Fields:
Translation:
AnimalsCells
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Noncanonical role for Ku70/80 in the prevention of allergic airway inflammation via maintenance of airway epithelial cell organelle homeostasis. Am J Physiol Lung Cell Mol Physiol. 2020 10 01; 319(4):L728-L741.
Rehman R, Vijayakumar VE, Jaiswal A, Jain V, Mukherjee S, Vellarikkal SK, Dieffenbach PB, Fredenburgh LE, Prakash YS, Ghosh B, Agrawal A, Mabalirajan U. PMID: 32877223.
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PubMed Mentions:
2 Fields:
Translation:
HumansAnimalsCells
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Transient non-integrative expression of nuclear reprogramming factors promotes multifaceted amelioration of aging in human cells. Nat Commun. 2020 03 24; 11(1):1545.
Sarkar TJ, Quarta M, Mukherjee S, Colville A, Paine P, Doan L, Tran CM, Chu CR, Horvath S, Qi LS, Bhutani N, Rando TA, Sebastiano V. PMID: 32210226; PMCID: PMC7093390.
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PubMed Mentions:
101 Fields:
Translation:
HumansAnimalsCells
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Single-cell mass cytometry reveals cross-talk between inflammation-dampening and inflammation-amplifying cells in osteoarthritic cartilage. Sci Adv. 2020 03; 6(11):eaay5352.
Grandi FC, Baskar R, Smeriglio P, Murkherjee S, Indelli PF, Amanatullah DF, Goodman S, Chu C, Bendall S, Bhutani N. PMID: 32201724; PMCID: PMC7069698.
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PubMed Mentions:
30 Fields:
Translation:
HumansCells
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Miro1 regulates intercellular mitochondrial transport & enhances mesenchymal stem cell rescue efficacy. EMBO J. 2014 May 02; 33(9):994-1010.
Ahmad T, Mukherjee S, Pattnaik B, Kumar M, Singh S, Kumar M, Rehman R, Tiwari BK, Jha KA, Barhanpurkar AP, Wani MR, Roy SS, Mabalirajan U, Ghosh B, Agrawal A. PMID: 24431222; PMCID: PMC4193933.
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PubMed Mentions:
265 Fields:
Translation:
HumansAnimalsCells
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Computational classification of mitochondrial shapes reflects stress and redox state. Cell Death Dis. 2013 Jan 17; 4:e461.
Ahmad T, Aggarwal K, Pattnaik B, Mukherjee S, Sethi T, Tiwari BK, Kumar M, Micheal A, Mabalirajan U, Ghosh B, Sinha Roy S, Agrawal A. PMID: 23328668; PMCID: PMC3564000.
View in:
PubMed Mentions:
101 Fields:
Translation:
HumansCells
This graph shows the total number of publications by year. To see the data as text,
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This graph shows the total number of publications by year. To return to the graph,
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| Year | Publications |
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| 2013 | 1 |
| 2014 | 1 |
| 2020 | 3 |
| 2021 | 1 |
| 2022 | 2 |
This graph shows the number and percent of publications by field.
Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications.
Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written.
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This graph shows the number and percent of publications by field.
Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications.
Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written.
To see the data as text,
click here.
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