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    Midori Kato-Maeda

    TitleAssociate Professor
    SchoolUCSF School of Medicine
    DepartmentMedicine
    Address1001 Potrero Ave, SFGH 100
    San Francisco CA 94110
    Phone415-206-8121
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      Research Interests

      Dr. Kato-Maeda’s research activities focus on the study of the diversity of Mycobacterium tuberculosis and its impact on the varying outcomes of tuberculosis transmission and pathogenesis, as well as its transmission dynamics.
      Her research group has demonstrated that the classification of MTB based on lineages and sublineages has a biological meaning, as some sublineages of MTB strains are more likely to cause secondary cases.

      She has collaborations with the San Francisco Department of Public Health Division of Tuberculosis, CDC, and other academic institutions in United States and abroad including Tanzania, Zimbabwe, and Panama.

      Dr. Kato-Maeda participates in teaching activities related to the molecular epidemiology of tuberculosis as well as research management involving laboratory components. She also facilitates laboratory meetings for the tuberculosis research community at SFGH/UCSF. Dr. Kato-Maeda also serves as a consultant for laboratory aspects of the Tuberculosis Control Program, and is a consultant to numerous research projects related to tuberculosis.


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      Collapse Global Health

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      Collapse Publications
      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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      1. Stucki D, Brites D, Jeljeli L, Coscolla M, Liu Q, Trauner A, Fenner L, Rutaihwa L, Borrell S, Luo T, Gao Q, Kato-Maeda M, Ballif M, Egger M, Macedo R, Mardassi H, Moreno M, Vilanova GT, Fyfe J, Globan M, Thomas J, Jamieson F, Guthrie JL, Asante-Poku A, Yeboah-Manu D, Wampande E, Ssengooba W, Joloba M, Boom WH, Basu I, Bower J, Saraiva M, Vasconcellos SE, Suffys P, Koch A, Wilkinson R, Gail-Bekker L, Malla B, Ley SD, Beck HP, de Jong BC, Toit K, Sanchez-Padilla E, Bonnet M, Gil-Brusola A, Frank M, Penlap Beng VN, Eisenach K, Alani I, Ndung'u PW, Revathi G, Gehre F, Akter S, Ntoumi F, Stewart-Isherwood L, Ntinginya NE, Rachow A, Hoelscher M, Cirillo DM, Skenders G, Hoffner S, Bakonyte D, Stakenas P, Diel R, Crudu V, Moldovan O, Al-Hajoj S, Otero L, Barletta F, Carter EJ, Diero L, Supply P, Comas I, Niemann S, Gagneux S. Mycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages. Nat Genet. 2016 Oct 31. PMID: 27798628.
        View in: PubMed
      2. Walter ND, de Jong BC, Garcia BJ, Dolganov GM, Worodria W, Byanyima P, Musisi E, Huang L, Chan ED, Van TT, Antonio M, Ayorinde A, Kato-Maeda M, Nahid P, Leung AM, Yen A, Fingerlin TE, Kechris K, Strong M, Voskuil MI, Davis JL, Schoolnik GK. Adaptation of Mycobacterium tuberculosis to Impaired Host Immunity in HIV-Infected Patients. J Infect Dis. 2016 Oct 15; 214(8):1205-11. PMID: 27534685; PMCID: PMC5034964 [Available on 10/15/17].
      3. Xu J, Guttorp P, Kato-Maeda M, Minin VN. Likelihood-based inference for discretely observed birth-death-shift processes, with applications to evolution of mobile genetic elements. Biometrics. 2015 Dec; 71(4):1009-21. PMID: 26148963.
        View in: PubMed
      4. Jayakumar A, Vittinghoff E, Segal MR, MacKenzie WR, Johnson JL, Gitta P, Saukkonen J, Anderson J, Weiner M, Engle M, Yoon C, Kato-Maeda M, Nahid P. Serum biomarkers of treatment response within a randomized clinical trial for pulmonary tuberculosis. Tuberculosis (Edinb). 2015 Jul; 95(4):415-20. PMID: 26022314; PMCID: PMC4521594 [Available on 07/01/16].
      5. Choi JC, Jarlsberg LG, Grinsdale JA, Osmond DH, Higashi J, Hopewell PC, Kato-Maeda M. Reduced sensitivity of the QuantiFERON(®) test in diabetic patients with smear-negative tuberculosis. Int J Tuberc Lung Dis. 2015 May; 19(5):582-8. PMID: 25868028.
        View in: PubMed
      6. Srinivasan R, Karaoz U, Volegova M, MacKichan J, Kato-Maeda M, Miller S, Nadarajan R, Brodie EL, Lynch SV. Use of 16S rRNA gene for identification of a broad range of clinically relevant bacterial pathogens. PLoS One. 2015; 10(2):e0117617. PMID: 25658760; PMCID: PMC4319838.
      7. Chamie G, Wandera B, Marquez C, Kato-Maeda M, Kamya MR, Havlir DV, Charlebois ED. Identifying locations of recent TB transmission in rural Uganda: a multidisciplinary approach. Trop Med Int Health. 2015 Apr; 20(4):537-45. PMID: 25583212; PMCID: PMC4355181 [Available on 04/01/16].
      8. Coscolla M, Barry PM, Oeltmann JE, Koshinsky H, Shaw T, Cilnis M, Posey J, Rose J, Weber T, Fofanov VY, Gagneux S, Kato-Maeda M, Metcalfe JZ. Genomic epidemiology of multidrug-resistant Mycobacterium tuberculosis during transcontinental spread. J Infect Dis. 2015 Jul 15; 212(2):302-10. PMID: 25601940; PMCID: PMC4490235 [Available on 07/15/16].
      9. Suwanpimolkul G, Grinsdale JA, Jarlsberg LG, Higashi J, Osmond DH, Hopewell PC, Kato-Maeda M. Association between diabetes mellitus and tuberculosis in United States-born and foreign-born populations in San Francisco. PLoS One. 2014; 9(12):e114442. PMID: 25478954; PMCID: PMC4257695.
      10. Budzik JM, Jarlsberg LG, Higashi J, Grinsdale J, Hopewell PC, Kato-Maeda M, Nahid P. Pyrazinamide resistance, Mycobacterium tuberculosis lineage and treatment outcomes in San Francisco, California. PLoS One. 2014; 9(4):e95645. PMID: 24759760; PMCID: PMC3997554.
      11. Farhat MR, Shapiro BJ, Kieser KJ, Sultana R, Jacobson KR, Victor TC, Warren RM, Streicher EM, Calver A, Sloutsky A, Kaur D, Posey JE, Plikaytis B, Oggioni MR, Gardy JL, Johnston JC, Rodrigues M, Tang PK, Kato-Maeda M, Borowsky ML, Muddukrishna B, Kreiswirth BN, Kurepina N, Galagan J, Gagneux S, Birren B, Rubin EJ, Lander ES, Sabeti PC, Murray M. Genomic analysis identifies targets of convergent positive selection in drug-resistant Mycobacterium tuberculosis. Nat Genet. 2013 Oct; 45(10):1183-9. PMID: 23995135; PMCID: PMC3887553.
      12. Comas I, Coscolla M, Luo T, Borrell S, Holt KE, Kato-Maeda M, Parkhill J, Malla B, Berg S, Thwaites G, Yeboah-Manu D, Bothamley G, Mei J, Wei L, Bentley S, Harris SR, Niemann S, Diel R, Aseffa A, Gao Q, Young D, Gagneux S. Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans. Nat Genet. 2013 Oct; 45(10):1176-82. PMID: 23995134; PMCID: PMC3800747.
      13. Anderson J, Jarlsberg LG, Grindsdale J, Osmond D, Kawamura M, Hopewell PC, Kato-Maeda M. Sublineages of lineage 4 (Euro-American) Mycobacterium tuberculosis differ in genotypic clustering. Int J Tuberc Lung Dis. 2013 Jul; 17(7):885-91. PMID: 23743309.
        View in: PubMed
      14. Bojorquez I, Barnes RF, Flood J, López-Gatell H, Garfein RS, Bäcker CE, Alpuche C, Vinetz JM, Catanzaro A, Kato-Maeda M, Rodwell TC. Multidrug-resistant tuberculosis among patients in Baja California, Mexico, and Hispanic patients in California. Am J Public Health. 2013 Jul; 103(7):1301-5. PMID: 23678924; PMCID: PMC3682598.
      15. Suwanpimolkul G, Jarlsberg LG, Grinsdale JA, Osmond D, Kawamura LM, Hopewell PC, Kato-Maeda M. Molecular epidemiology of tuberculosis in foreign-born persons living in San Francisco. Am J Respir Crit Care Med. 2013 May 1; 187(9):998-1006. PMID: 23471470; PMCID: PMC3707362.
      16. Kato-Maeda M, Ho C, Passarelli B, Banaei N, Grinsdale J, Flores L, Anderson J, Murray M, Rose G, Kawamura LM, Pourmand N, Tariq MA, Gagneux S, Hopewell PC. Use of whole genome sequencing to determine the microevolution of Mycobacterium tuberculosis during an outbreak. PLoS One. 2013; 8(3):e58235. PMID: 23472164; PMCID: PMC3589338.
      17. Doss CR, Suchard MA, Holmes I, Kato-Maeda M, Minin VN. Fitting Birth-Death Processes to Panel Data with Applications to Bacterial DNA Fingerprinting. Ann Appl Stat. 2013; 7(4):2315-2335. PMID: 26702330.
        View in: PubMed
      18. Somashekar BS, Amin AG, Tripathi P, MacKinnon N, Rithner CD, Shanley CA, Basaraba R, Henao-Tamayo M, Kato-Maeda M, Ramamoorthy A, Orme IM, Ordway DJ, Chatterjee D. Metabolomic signatures in guinea pigs infected with epidemic-associated W-Beijing strains of Mycobacterium tuberculosis. J Proteome Res. 2012 Oct 5; 11(10):4873-84. PMID: 22873951.
        View in: PubMed
      19. Kato-Maeda M, Shanley CA, Ackart D, Jarlsberg LG, Shang S, Obregon-Henao A, Harton M, Basaraba RJ, Henao-Tamayo M, Barrozo JC, Rose J, Kawamura LM, Coscolla M, Fofanov VY, Koshinsky H, Gagneux S, Hopewell PC, Ordway DJ, Orme IM. Beijing sublineages of Mycobacterium tuberculosis differ in pathogenicity in the guinea pig. Clin Vaccine Immunol. 2012 Aug; 19(8):1227-37. PMID: 22718126; PMCID: PMC3416080.
      20. Dantes R, Metcalfe J, Kim E, Kato-Maeda M, Hopewell PC, Kawamura M, Nahid P, Cattamanchi A. Impact of isoniazid resistance-conferring mutations on the clinical presentation of isoniazid monoresistant tuberculosis. PLoS One. 2012; 7(5):e37956. PMID: 22649569; PMCID: PMC3359338.
      21. Kato-Maeda M, Nahid P. Mycobacterium tuberculosis lineage--what's in your lungs? Clin Infect Dis. 2012 Jan 15; 54(2):220-4. PMID: 22198990; PMCID: PMC3245729.
      22. Comas I, Borrell S, Roetzer A, Rose G, Malla B, Kato-Maeda M, Galagan J, Niemann S, Gagneux S. Whole-genome sequencing of rifampicin-resistant Mycobacterium tuberculosis strains identifies compensatory mutations in RNA polymerase genes. Nat Genet. 2012 Jan; 44(1):106-10. PMID: 22179134; PMCID: PMC3246538.
      23. Worjoloh A, Kato-Maeda M, Osmond D, Freyre R, Aziz N, Cohan D. Interferon gamma release assay compared with the tuberculin skin test for latent tuberculosis detection in pregnancy. Obstet Gynecol. 2011 Dec; 118(6):1363-70. PMID: 22105266; PMCID: PMC3232049.
      24. Worodria W, Anderson J, Cattamanchi A, Davis JL, den Boon S, Andama A, Yoo SD, Joloba M, Huang L, Kato-Maeda M. The role of speciation in positive Lowenstein-Jensen culture isolates from a high tuberculosis burden country. PLoS One. 2011; 6(11):e27017. PMID: 22073241; PMCID: PMC3208568.
      25. Kato-Maeda M, Metcalfe JZ, Flores L. Genotyping of Mycobacterium tuberculosis: application in epidemiologic studies. Future Microbiol. 2011 Feb; 6(2):203-16. PMID: 21366420; PMCID: PMC4296029.
      26. Kato-Maeda M, Gagneux S, Flores LL, Kim EY, Small PM, Desmond EP, Hopewell PC. Strain classification of Mycobacterium tuberculosis: congruence between large sequence polymorphisms and spoligotypes. Int J Tuberc Lung Dis. 2011 Jan; 15(1):131-3. PMID: 21276309; PMCID: PMC3600895.
      27. Metcalfe JZ, Kim EY, Lin SY, Cattamanchi A, Oh P, Flood J, Hopewell PC, Kato-Maeda M. Determinants of multidrug-resistant tuberculosis clusters, California, USA, 2004-2007. Emerg Infect Dis. 2010 Sep; 16(9):1403-9. PMID: 20735924; PMCID: PMC3294976.
      28. Nahid P, Bliven EE, Kim EY, Mac Kenzie WR, Stout JE, Diem L, Johnson JL, Gagneux S, Hopewell PC, Kato-Maeda M. Influence of M. tuberculosis lineage variability within a clinical trial for pulmonary tuberculosis. PLoS One. 2010; 5(5):e10753. PMID: 20505778; PMCID: PMC2873999.
      29. Kato-Maeda M, Kim EY, Flores L, Jarlsberg LG, Osmond D, Hopewell PC. Differences among sublineages of the East-Asian lineage of Mycobacterium tuberculosis in genotypic clustering. Int J Tuberc Lung Dis. 2010 May; 14(5):538-44. PMID: 20392345; PMCID: PMC3625672.
      30. Kim EY, Nahid P, Hopewell PC, Kato-Maeda M. Novel hot spot of IS6110 insertion in Mycobacterium tuberculosis. J Clin Microbiol. 2010 Apr; 48(4):1422-4. PMID: 20147648; PMCID: PMC2849554.
      31. Flores L, Jarlsberg LG, Kim EY, Osmond D, Grinsdale J, Kawamura M, Desmond E, Hopewell PC, Kato-Maeda M. Comparison of restriction fragment length polymorphism with the polymorphic guanine-cytosine-rich sequence and spoligotyping for differentiation of Mycobacterium tuberculosis isolates with five or fewer copies of IS6110. J Clin Microbiol. 2010 Feb; 48(2):575-8. PMID: 20032250; PMCID: PMC2815604.
      32. Marquina-Castillo B, García-García L, Ponce-de-León A, Jimenez-Corona ME, Bobadilla-Del Valle M, Cano-Arellano B, Canizales-Quintero S, Martinez-Gamboa A, Kato-Maeda M, Robertson B, Young D, Small P, Schoolnik G, Sifuentes-Osornio J, Hernandez-Pando R. Virulence, immunopathology and transmissibility of selected strains of Mycobacterium tuberculosis in a murine model. Immunology. 2009 Sep; 128(1):123-33. PMID: 19191912; PMCID: PMC2747145.
      33. Martinez-Gamboa A, Ponce-de-Leon A, Galindo-Fraga A, Bobadilla-del-Valle M, Kato-Maeda M, Robertson BD, Young DB, Small PM, Sifuentes-Osornio J. Molecular analysis of Mycobacterium tuberculosis strains with an intact pks15/1 gene in a rural community of Mexico. Arch Med Res. 2008 Nov; 39(8):809-14. PMID: 18996296.
        View in: PubMed
      34. Wu B, Huang C, Kato-Maeda M, Hopewell PC, Daley CL, Krensky AM, Clayberger C. IL-24 modulates IFN-gamma expression in patients with tuberculosis. Immunol Lett. 2008 Apr 15; 117(1):57-62. PMID: 18199488; PMCID: PMC2679252.
      35. Wu B, Huang C, Kato-Maeda M, Hopewell PC, Daley CL, Krensky AM, Clayberger C. IL-9 is associated with an impaired Th1 immune response in patients with tuberculosis. Clin Immunol. 2008 Feb; 126(2):202-10. PMID: 18032114.
        View in: PubMed
      36. Flores L, Van T, Narayanan S, DeRiemer K, Kato-Maeda M, Gagneux S. Large sequence polymorphisms classify Mycobacterium tuberculosis strains with ancestral spoligotyping patterns. J Clin Microbiol. 2007 Oct; 45(10):3393-5. PMID: 17699643; PMCID: PMC2045339.
      37. Wu B, Huang C, Garcia L, Ponce de Leon A, Osornio JS, Bobadilla-del-Valle M, Ferreira L, Canizales S, Small P, Kato-Maeda M, Krensky AM, Clayberger C. Unique gene expression profiles in infants vaccinated with different strains of Mycobacterium bovis bacille Calmette-Guerin. Infect Immun. 2007 Jul; 75(7):3658-64. PMID: 17502394; PMCID: PMC1932948.
      38. Wu B, Huang C, Kato-Maeda M, Hopewell PC, Daley CL, Krensky AM, Clayberger C. Messenger RNA expression of IL-8, FOXP3, and IL-12beta differentiates latent tuberculosis infection from disease. J Immunol. 2007 Mar 15; 178(6):3688-94. PMID: 17339466; PMCID: PMC2679258.
      39. Aga RS, Fair E, Abernethy NF, Deriemer K, Paz EA, Kawamura LM, Small PM, Kato-Maeda M. Microevolution of the direct repeat locus of Mycobacterium tuberculosis in a strain prevalent in San Francisco. J Clin Microbiol. 2006 Apr; 44(4):1558-60. PMID: 16597893; PMCID: PMC1448666.
      40. Gagneux S, DeRiemer K, Van T, Kato-Maeda M, de Jong BC, Narayanan S, Nicol M, Niemann S, Kremer K, Gutierrez MC, Hilty M, Hopewell PC, Small PM. Variable host-pathogen compatibility in Mycobacterium tuberculosis. Proc Natl Acad Sci U S A. 2006 Feb 21; 103(8):2869-73. PMID: 16477032; PMCID: PMC1413851.
      41. Freeman R, Kato-Maeda M, Hauge KA, Horan KL, Oren E, Narita M, Wallis CK, Cave D, Nolan CM, Small PM, Cangelosi GA. Use of rapid genomic deletion typing to monitor a tuberculosis outbreak within an urban homeless population. J Clin Microbiol. 2005 Nov; 43(11):5550-4. PMID: 16272485; PMCID: PMC1287805.
      42. Mostowy S, Onipede A, Gagneux S, Niemann S, Kremer K, Desmond EP, Kato-Maeda M, Behr M. Genomic analysis distinguishes Mycobacterium africanum. J Clin Microbiol. 2004 Aug; 42(8):3594-9. PMID: 15297503; PMCID: PMC497617.
      43. Tsolaki AG, Hirsh AE, DeRiemer K, Enciso JA, Wong MZ, Hannan M, Goguet de la Salmoniere YO, Aman K, Kato-Maeda M, Small PM. Functional and evolutionary genomics of Mycobacterium tuberculosis: insights from genomic deletions in 100 strains. Proc Natl Acad Sci U S A. 2004 Apr 6; 101(14):4865-70. PMID: 15024109; PMCID: PMC387340.
      44. Kato-Maeda M, Bautista-Alavez A, Rolón-Montes-de-Oca AL, Ramos-Hinojosa A, Ponce-de-León A, Bobadilla-del-Valle M, Ruiz-Palacios G, Sifuentes-Osornio J. [Increasing trend of antimicrobial drug-resistance in organisms causing bacteremia at a tertiary-care hospital: 1995 to 2000]. Rev Invest Clin. 2003 Nov-Dec; 55(6):600-5. PMID: 15011727.
        View in: PubMed
      45. Bobadilla-del-Valle M, Ponce-de-León A, Kato-Maeda M, Hernández-Cruz A, Calva-Mercado JJ, Chávez-Mazari B, Caballero-Rivera BA, Nolasco-García JC, Sifuentes-Osornio J. Comparison of sodium carbonate, cetyl-pyridinium chloride, and sodium borate for preservation of sputa for culture of Mycobacterium tuberculosis. J Clin Microbiol. 2003 Sep; 41(9):4487-8. PMID: 12958303; PMCID: PMC193851.
      46. Navarro-Alvarez S, Bobadilla del Valle M, Kato-Maeda M. Screening for tuberculosis in pregnancy. Int J Gynaecol Obstet. 2002 Dec; 79(3):251-2. PMID: 12445993.
        View in: PubMed
      47. García-García Mde L, Ponce-De-León A, García-Sancho MC, Ferreyra-Reyes L, Palacios-Martínez M, Fuentes J, Kato-Maeda M, Bobadilla M, Small P, Sifuentes-Osornio J. Tuberculosis-related deaths within a well-functioning DOTS control program. Emerg Infect Dis. 2002 Nov; 8(11):1327-33. PMID: 12453365; PMCID: PMC2738530.
      48. Kato-Maeda M, Mohar A. [Genetic material: instruction manual for the management of disease; breast cancer, for example]. Rev Invest Clin. 2002 Jul-Aug; 54(4):292-4. PMID: 12415951.
        View in: PubMed
      49. Kato-Maeda M, Gao Q, Small PM. Microarray analysis of pathogens and their interaction with hosts. Cell Microbiol. 2001 Nov; 3(11):713-9. PMID: 11696031.
        View in: PubMed
      50. Bobadilla-del-Valle M, Ponce-de-Leon A, Arenas-Huertero C, Vargas-Alarcon G, Kato-Maeda M, Small PM, Couary P, Ruiz-Palacios GM, Sifuentes-Osornio J. rpoB Gene mutations in rifampin-resistant Mycobacterium tuberculosis identified by polymerase chain reaction single-stranded conformational polymorphism. Emerg Infect Dis. 2001 Nov-Dec; 7(6):1010-3. PMID: 11747730; PMCID: PMC2631921.
      51. Kato-Maeda M, Small PM. User's guide to tuberculosis resources on the internet. Clin Infect Dis. 2001 Jun 1; 32(11):1580-8. PMID: 11340530.
        View in: PubMed
      52. Kato-Maeda M, Rhee JT, Gingeras TR, Salamon H, Drenkow J, Smittipat N, Small PM. Comparing genomes within the species Mycobacterium tuberculosis. Genome Res. 2001 Apr; 11(4):547-54. PMID: 11282970; PMCID: PMC311074.
      53. Kato-Maeda M, Bifani PJ, Kreiswirth BN, Small PM. The nature and consequence of genetic variability within Mycobacterium tuberculosis. J Clin Invest. 2001 Mar; 107(5):533-7. PMID: 11238552; PMCID: PMC199434.
      54. Salamon H, Kato-Maeda M, Small PM, Drenkow J, Gingeras TR. Detection of deleted genomic DNA using a semiautomated computational analysis of GeneChip data. Genome Res. 2000 Dec; 10(12):2044-54. PMID: 11116098; PMCID: PMC313082.
      55. Kato-Maeda M, Ponce-de-León S, Sifuentes-Osornio J, Rangel-Frausto MS, Calva-Mercado J, Infante-Surez L, Villareal FM, Ponce-de-León S. Bloodborne viral infections in patients attending an emergency room in Mexico City: estimate of seroconversion probability in healthcare workers after an occupational exposure. Infect Control Hosp Epidemiol. 2000 Sep; 21(9):600-2. PMID: 11001265.
        View in: PubMed
      56. Kato-Maeda M, Small PM. How molecular epidemiology has changed what we know about tuberculosis. West J Med. 2000 Apr; 172(4):256-9. PMID: 10778380; PMCID: PMC1070841.
      57. Kato-Maeda M, Sifuentes-Osornio J, Bobadilla-del-Valle M, Ruiz-Palacios GM, Ponce-de-León A. Drug resistance among acid-fast bacilli. Lancet. 1999 May 15; 353(9165):1709. PMID: 10335816.
        View in: PubMed
      58. Ponce-de-León S, Lisker-Melman M, Kato-Maeda M, Gamboa-Domínguez A, Ontiveros C, Behrens RH, González-Ruiz A. Trypanosoma brucei rhodesiense infection imported to Mexico from a tourist resort in Kenya. Clin Infect Dis. 1996 Oct; 23(4):847-8. PMID: 8909868.
        View in: PubMed
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