Hiroaki Ishikawa, PhD

Title(s)Specialist, Biochemistry and Biophysics
SchoolSchool of Medicine
Address600 16th Street, #N376
San Francisco CA 94158
Phone415-514-4323
PronounsHe/Him/His
ORCID ORCID Icon0000-0003-3984-3657 Additional info
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    University of California, San FranciscoPostdoctoral StudiesGraduate Division

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Testing the ion-current model for flagellar length sensing and IFT regulation. Elife. 2023 01 13; 12. Ishikawa H, Moore J, Diener DR, Delling M, Marshall WF. PMID: 36637158; PMCID: PMC9891718.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    2. Biosynthesis of Linear Protein Nanoarrays Using the Flagellar Axoneme. ACS Synth Biol. 2022 04 15; 11(4):1454-1465. Ishikawa H, Tian JL, Yu JE, Marshall WF, Qin H. PMID: 35271249; PMCID: PMC9753153.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    3. Testing the ion-current model of flagellar length-sensing. Biophysical Journal. 2022 Feb 1; 121(3):401a-402a. Ishikawa IH, Diener DD, Delling DM, Marshall MW. .
      View in: Publisher Site   Mentions:
    4. A simple method to generate human airway epithelial organoids with externally orientated apical membranes. Am J Physiol Lung Cell Mol Physiol. 2022 03 01; 322(3):L420-L437. Boecking CA, Walentek P, Zlock LT, Sun DI, Wolters PJ, Ishikawa H, Jin BJ, Haggie PM, Marshall WF, Verkman AS, Finkbeiner WE. PMID: 35080188; PMCID: PMC8917940.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    5. The short flagella 1 (SHF1) gene in Chlamydomonas encodes a Crescerin TOG-domain protein required for late stages of flagellar growth. Mol Biol Cell. 2022 02 01; 33(2):ar12. Perlaza K, Mirvis M, Ishikawa H, Marshall W. PMID: 34818077; PMCID: PMC9236146.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    6. Analysis of biological noise in the flagellar length control system. iScience. 2021 Apr 23; 24(4):102354. Bauer D, Ishikawa H, Wemmer KA, Hendel NL, Kondev J, Marshall WF. PMID: 33898946; PMCID: PMC8059064.
      View in: PubMed   Mentions: 12  
    7. Odf2 haploinsufficiency causes a new type of decapitated and decaudated spermatozoa, Odf2-DDS, in mice. Sci Rep. 2019 10 03; 9(1):14249. Ito C, Akutsu H, Yao R, Yoshida K, Yamatoya K, Mutoh T, Makino T, Aoyama K, Ishikawa H, Kunimoto K, Tsukita S, Noda T, Kikkawa M, Toshimori K. PMID: 31582806; PMCID: PMC6776547.
      View in: PubMed   Mentions: 18     Fields:    Translation:AnimalsCells
    8. Testing the time-of-flight model for flagellar length sensing. Mol Biol Cell. 2017 Nov 07; 28(23):3447-3456. Ishikawa H, Marshall WF. PMID: 28931591; PMCID: PMC5687043.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCells
    9. Intraflagellar Transport and Ciliary Dynamics. Cold Spring Harb Perspect Biol. 2017 Mar 01; 9(3). Ishikawa H, Marshall WF. PMID: 28249960; PMCID: PMC5334256.
      View in: PubMed   Mentions: 85     Fields:    Translation:HumansAnimalsCells
    10. Versatile protein tagging in cells with split fluorescent protein. Nat Commun. 2016 Mar 18; 7:11046. Kamiyama D, Sekine S, Barsi-Rhyne B, Hu J, Chen B, Gilbert LA, Ishikawa H, Leonetti MD, Marshall WF, Weissman JS, Huang B. PMID: 26988139; PMCID: PMC4802074.
      View in: PubMed   Mentions: 194     Fields:    Translation:HumansCells
    11. A systematic comparison of mathematical models for inherent measurement of ciliary length: how a cell can measure length and volume. Biophys J. 2015 Mar 24; 108(6):1361-1379. Ludington WB, Ishikawa H, Serebrenik YV, Ritter A, Hernandez-Lopez RA, Gunzenhauser J, Kannegaard E, Marshall WF. PMID: 25809250; PMCID: PMC4375445.
      View in: PubMed   Mentions: 26     Fields:    Translation:AnimalsCells
    12. Efficient live fluorescence imaging of intraflagellar transport in mammalian primary cilia. Methods Cell Biol. 2015; 127:189-201. Ishikawa H, Marshall WF. PMID: 25837392; PMCID: PMC5028138.
      View in: PubMed   Mentions: 14     Fields:    Translation:AnimalsCells
    13. Mechanobiology of Ciliogenesis. Bioscience. 2014 Dec 01; 64(12):1084-1091. Ishikawa H, Marshall WF. PMID: 26954101; PMCID: PMC4776693.
      View in: PubMed   Mentions: 6     Fields:    
    14. Correction: TTC26/DYF13 is an intraflagellar transport protein required for transport of motility-related proteins into flagella. Elife. 2014 04 01; 3:e02897. Ishikawa H, Ide T, Yagi T, Jiang X, Hirono M, Sasaki H, Yanagisawa H, Wemmer KA, Stainier DY, Qin H, Kamiya R, Marshall WF. PMID: 24692455; PMCID: PMC3971414.
      View in: PubMed   Mentions:    Fields:    
    15. FAP20 is an inner junction protein of doublet microtubules essential for both the planar asymmetrical waveform and stability of flagella in Chlamydomonas. Mol Biol Cell. 2014 May; 25(9):1472-83. Yanagisawa HA, Mathis G, Oda T, Hirono M, Richey EA, Ishikawa H, Marshall WF, Kikkawa M, Qin H. PMID: 24574454; PMCID: PMC4004596.
      View in: PubMed   Mentions: 44     Fields:    Translation:AnimalsCells
    16. TTC26/DYF13 is an intraflagellar transport protein required for transport of motility-related proteins into flagella. Elife. 2014 Jan 01; 3:e01566. Ishikawa H, Ide T, Yagi T, Jiang X, Hirono M, Sasaki H, Yanagisawa H, Wemmer KA, Stainier DY, Qin H, Kamiya R, Marshall WF. PMID: 24596149; PMCID: PMC3936282.
      View in: PubMed   Mentions: 48     Fields:    Translation:AnimalsCells
    17. Primary Cilia Respond to Uniaxial Strain by Reorienting and Elongating along the Axis of Stretch. Biophysical Journal. 2014 Jan 1; 106(2):170a. Ishikawa IH, Marshall MW. .
      View in: Publisher Site   Mentions:
    18. Two appendages homologous between basal bodies and centrioles are formed using distinct Odf2 domains. J Cell Biol. 2013 Nov 11; 203(3):417-25. Tateishi K, Yamazaki Y, Nishida T, Watanabe S, Kunimoto K, Ishikawa H, Tsukita S. PMID: 24189274; PMCID: PMC3824012.
      View in: PubMed   Mentions: 44     Fields:    Translation:AnimalsCells
    19. Isolation of mammalian primary cilia. Methods Enzymol. 2013; 525:311-25. Ishikawa H, Marshall WF. PMID: 23522476.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    20. Loss of basal feet on Odf2 deletion perturbs polarization of basal bodies. Cilia. 2012 Nov 1; 1(Suppl 1):o26. Kunimoto KK, Yamazaki YY, Nishida NT, Shinohara SK, Ishikawa IH, Hasegawa HT, Okanoue OT, Hamada HH, Noda NT, Tamura TA, Tsukita TS. .
      View in: Publisher Site   Mentions:
    21. The role of retrograde intraflagellar transport in flagellar assembly, maintenance, and function. J Cell Biol. 2012 Oct 01; 199(1):151-67. Engel BD, Ishikawa H, Wemmer KA, Geimer S, Wakabayashi K, Hirono M, Craige B, Pazour GJ, Witman GB, Kamiya R, Marshall WF. PMID: 23027906; PMCID: PMC3461521.
      View in: PubMed   Mentions: 62     Fields:    Translation:AnimalsCells
    22. Proteomic analysis of mammalian primary cilia. Curr Biol. 2012 Mar 06; 22(5):414-9. Ishikawa H, Thompson J, Yates JR, Marshall WF. PMID: 22326026; PMCID: PMC3298568.
      View in: PubMed   Mentions: 149     Fields:    Translation:AnimalsCells
    23. Coordinated ciliary beating requires Odf2-mediated polarization of basal bodies via basal feet. Cell. 2012 Jan 20; 148(1-2):189-200. Kunimoto K, Yamazaki Y, Nishida T, Shinohara K, Ishikawa H, Hasegawa T, Okanoue T, Hamada H, Noda T, Tamura A, Tsukita S, Tsukita S. PMID: 22265411.
      View in: PubMed   Mentions: 110     Fields:    Translation:AnimalsCells
    24. Ciliogenesis: building the cell's antenna. Nat Rev Mol Cell Biol. 2011 Apr; 12(4):222-34. Ishikawa H, Marshall WF. PMID: 21427764.
      View in: PubMed   Mentions: 506     Fields:    Translation:HumansAnimalsCells
    25. A cell-based screen for inhibitors of flagella-driven motility in Chlamydomonas reveals a novel modulator of ciliary length and retrograde actin flow. Cytoskeleton (Hoboken). 2011 Mar; 68(3):188-203. Engel BD, Ishikawa H, Feldman JL, Wilson CW, Chuang PT, Snedecor J, Williams J, Sun Z, Marshall WF. PMID: 21360831.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansAnimalsCells
    26. Odf2-deficient mother centrioles lack distal/subdistal appendages and the ability to generate primary cilia. Nat Cell Biol. 2005 May; 7(5):517-24. Ishikawa H, Kubo A, Tsukita S, Tsukita S. PMID: 15852003.
      View in: PubMed   Mentions: 159     Fields:    Translation:AnimalsCells
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