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Jennifer Fung, PhD

Title(s)Associate Professor, Ob/Gyn, Reproductive Sciences
SchoolSchool of Medicine
Phone415-514-4309
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    Collapse Biography 
    Collapse Education and Training
    University of California, San FranciscoPh.D.1996 Graduate Division (Biophysics)

    Collapse Overview 

    Collapse Research 
    Collapse Research Activities and Funding
    Modeling and Analysis of Meiotic Homolog Pairing
    NIH/NIGMS R01GM116895Jun 8, 2016 - Mar 31, 2020
    Role: Principal Investigator
    Upgrading the OMX microscope for extended live imaging and fast live 3-D structur
    NIH S10OD010673May 15, 2012 - May 14, 2013
    Role: Principal Investigator
    Kinetics of Chromosome Synapsis During Meiosis
    NIH/NIGMS R01GM097213Mar 15, 2011 - Feb 29, 2016
    Role: Principal Investigator

    Collapse ORNG Applications 
    Collapse Websites
    Collapse In The News

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Wild P, Susperregui A, Piazza I, Dörig C, Oke A, Arter M, Yamaguchi M, Hilditch AT, Vuina K, Chan KC, Gromova T, Haber JE, Fung JC, Picotti P, Matos J. Network Rewiring of Homologous Recombination Enzymes during Mitotic Proliferation and Meiosis. Mol Cell. 2019 Aug 22; 75(4):859-874.e4. PMID: 31351878.
      View in: PubMed
    2. Marshall WF, Fung JC. Modeling meiotic chromosome pairing: a tug of war between telomere forces and a pairing-based Brownian ratchet leads to increased pairing fidelity. Phys Biol. 2019 05 07; 16(4):046005. PMID: 30943453.
      View in: PubMed
    3. Arter M, Hurtado-Nieves V, Oke A, Zhuge T, Wettstein R, Fung JC, Blanco MG, Matos J. Regulated Crossing-Over Requires Inactivation of Yen1/GEN1 Resolvase during Meiotic Prophase I. Dev Cell. 2018 06 18; 45(6):785-800.e6. PMID: 29920281.
      View in: PubMed
    4. Fung JC. Kinetochores: Importance of Being Fashionably Late. Cell Syst. 2017 06 28; 4(6):585-586. PMID: 28662384.
      View in: PubMed
    5. Pollard MG, Fung JC. In Vivo Imaging of Budding Yeast Meiosis. Methods Mol Biol. 2017; 1471:175-186. PMID: 28349396.
      View in: PubMed
    6. Marshall WF, Fung JC. Modeling meiotic chromosome pairing: nuclear envelope attachment, telomere-led active random motion, and anomalous diffusion. Phys Biol. 2016 Apr 05; 13(2):026003. PMID: 27046097.
      View in: PubMed
    7. Joao P. Sousa Martins, Xueqing Liu, Ashwini Oke, Ripla Arora, Federica Franciosi, Stephan Viville, Diana J. Laird, Jennifer C. Fung, Marco Conti. DAZL and CPEB1 regulate mRNA translation synergistically during oocyte maturation. Development. 2016 Apr 1; 143(7):e1.2-e1.2.
      View in: Publisher Site
    8. Sousa Martins JP, Liu X, Oke A, Arora R, Franciosi F, Viville S, Laird DJ, Fung JC, Conti M. DAZL and CPEB1 regulate mRNA translation synergistically during oocyte maturation. J Cell Sci. 2016 Mar 15; 129(6):1271-82. PMID: 26826184.
      View in: PubMed
    9. Marshall WM, Fung JC .. Modeling meiotic chromosome pairing: nuclear envelope attachment, telomere-led active random motion, and anomalous diffusion. Journal of Physical Biology. 2016.
    10. Vincenten N, Kuhl LM, Lam I, Oke A, Kerr AR, Hochwagen A, Fung J, Keeney S, Vader G, Marston AL. The kinetochore prevents centromere-proximal crossover recombination during meiosis. Elife. 2015 Dec 14; 4. PMID: 26653857.
      View in: PubMed
    11. Anderson CM, Oke A, Yam P, Zhuge T, Fung JC. Reduced Crossover Interference and Increased ZMM-Independent Recombination in the Absence of Tel1/ATM. PLoS Genet. 2015 Aug; 11(8):e1005478. PMID: 26305689.
      View in: PubMed
    12. Faire M, Skillern A, Arora R, Nguyen DH, Wang J, Chamberlain C, German MS, Fung JC, Laird DJ. Follicle dynamics and global organization in the intact mouse ovary. Dev Biol. 2015 Jul 01; 403(1):69-79. PMID: 25889274.
      View in: PubMed
    13. Oke A, Anderson CM, Yam P, Fung JC. Controlling meiotic recombinational repair - specifying the roles of ZMMs, Sgs1 and Mus81/Mms4 in crossover formation. PLoS Genet. 2014 Oct; 10(10):e1004690. PMID: 25329811.
      View in: PubMed
    14. Liu Y, Gaines WA, Callender T, Busygina V, Oke A, Sung P, Fung JC, Hollingsworth NM. Down-regulation of Rad51 activity during meiosis in yeast prevents competition with Dmc1 for repair of double-strand breaks. PLoS Genet. 2014 Jan; 10(1):e1004005. PMID: 24465215.
      View in: PubMed
    15. Rockmill B, Lefrançois P, Voelkel-Meiman K, Oke A, Roeder GS, Fung JC. High throughput sequencing reveals alterations in the recombination signatures with diminishing Spo11 activity. PLoS Genet. 2013 Oct; 9(10):e1003932. PMID: 24204324.
      View in: PubMed
    16. Arigovindan M, Fung JC, Elnatan D, Mennella V, Chan YH, Pollard M, Branlund E, Sedat JW, Agard DA. High-resolution restoration of 3D structures from widefield images with extreme low signal-to-noise-ratio. Proc Natl Acad Sci U S A. 2013 Oct 22; 110(43):17344-9. PMID: 24106307.
      View in: PubMed
    17. Rafelski SM, Viana MP, Zhang Y, Chan YH, Thorn KS, Yam P, Fung JC, Li H, Costa Lda F, Marshall WF. Mitochondrial network size scaling in budding yeast. Science. 2012 Nov 09; 338(6108):822-4. PMID: 23139336.
      View in: PubMed
    18. Anderson CM, Chen SY, Dimon MT, Oke A, DeRisi JL, Fung JC. ReCombine: a suite of programs for detection and analysis of meiotic recombination in whole-genome datasets. PLoS One. 2011; 6(10):e25509. PMID: 22046241.
      View in: PubMed
    19. Chen SY, Fung JC. Mapping of crossover sites using DNA microarrays. Methods Mol Biol. 2011; 745:117-34. PMID: 21660692.
      View in: PubMed
    20. Chen SY, Tsubouchi T, Rockmill B, Sandler JS, Richards DR, Vader G, Hochwagen A, Roeder GS, Fung JC. Global analysis of the meiotic crossover landscape. Dev Cell. 2008 Sep; 15(3):401-15. PMID: 18691940.
      View in: PubMed
    21. Fung JC, Rockmill B, Odell M, Roeder GS. Imposition of crossover interference through the nonrandom distribution of synapsis initiation complexes. Cell. 2004 Mar 19; 116(6):795-802. PMID: 15035982.
      View in: PubMed
    22. Rockmill B, Fung JC, Branda SS, Roeder GS. The Sgs1 helicase regulates chromosome synapsis and meiotic crossing over. Curr Biol. 2003 Nov 11; 13(22):1954-62. PMID: 14614820.
      View in: PubMed
    23. Jennifer C Fung, John W Sedat, Wallace F Marshall. Homologous DNA Interactions in Interphase: Spatial Organization of Interphase Nucleus. Encyclopedia of Life Sciences. 2001 Apr 19.
      View in: Publisher Site
    24. Fung JC, Marshall WF, Dernburg A, Agard DA, Sedat JW. Homologous chromosome pairing in Drosophila melanogaster proceeds through multiple independent initiations. J Cell Biol. 1998 Apr 06; 141(1):5-20. PMID: 9531544.
      View in: PubMed
    25. Jonathan H. Laurer, Damian A. Hajduk, Jennifer C. Fung, John W. Sedat, Steven D. Smith, Sol M. Gruner, David A. Agard, Richard J. Spontak. Microstructural Analysis of a Cubic Bicontinuous Morphology in a Neat SIS Triblock Copolymer. Macromolecules. 1997 Jun 1; 30(13):3938-3941.
      View in: Publisher Site
    26. Jonathan H. Laurer, Jennifer C. Fung, John W. Sedat, Steven D. Smith, Jon Samseth, Kell Mortensen, David A. Agard, Richard J. Spontak. From Micelles to Randomly Connected, Bilayered Membranes in Dilute Block Copolymer Blends. Langmuir. 1997 Apr 1; 13(8):2177-2180.
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    27. Marshall WF, Fung JC, Sedat JW. Deconstructing the nucleus: global architecture from local interactions. Curr Opin Genet Dev. 1997 Apr; 7(2):259-63. PMID: 9115425.
      View in: PubMed
    28. J.C. Fung, L. Kane, S.D. Smith, J.W. Sedat, D.A. Agard, R.J. Spontak. Phase Behavior of Complex Diblock Copolymer Blends: A Transmission Electron Microscopy Study. 1997 Jan 1; 239-241:179-184.
      View in: Publisher Site
    29. Dernburg AF, Broman KW, Fung JC, Marshall WF, Philips J, Agard DA, Sedat JW. Perturbation of nuclear architecture by long-distance chromosome interactions. Cell. 1996 May 31; 85(5):745-59. PMID: 8646782.
      View in: PubMed
    30. Fung JC, Liu W, de Ruijter WJ, Chen H, Abbey CK, Sedat JW, Agard DA .Toward fully automated high-resolution electron tomography. Journal of Structural Biology. 1996; 116(1):181-9.
    31. Richard J. Spontak, Jennifer C. Fung, Michael B. Braunfeld, John W. Sedat, David A. Agard, Lisaleigh Kane, Steven D. Smith, Michael M. Satkowski, Arman Ashraf, Damian A. Hajduk, Sol M. Gruner. Phase Behavior of Ordered Diblock Copolymer Blends:  Effect of Compositional Heterogeneity. Macromolecules. 1996 Jan 1; 29(13):4494-4507.
      View in: Publisher Site
    32. Richard J. Spontak, Jennifer C. Fung, Michael B. Braunfeld, John W. Sedat, David A. Agard, Arman Ashraf, Steven D. Smith. Architecture-Induced Phase Immiscibility in a Diblock/Multiblock Copolymer Blend. Macromolecules. 1996 Jan 1; 29(8):2850-2856.
      View in: Publisher Site
    33. Moritz M, Braunfeld MB, Fung JC, Sedat JW, Alberts BM, Agard DA. Three-dimensional structural characterization of centrosomes from early Drosophila embryos. J Cell Biol. 1995 Sep; 130(5):1149-59. PMID: 7657699.
      View in: PubMed