Madhumita Sushil, PhD

Title(s)Assistant Professor, Medicine
SchoolSchool of Medicine
PronounsShe/Her/Hers
ORCID ORCID Icon0000-0001-7884-0526 Additional info
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    Collapse education and training
    VIT UniversityB.Tech.2013Computer Science and Engineering
    Saarland UniversityM.Sc.2016Language Science and Technology
    University of AntwerpPhD2021Computational Linguistics
    University of California, San FranciscoPostdoc2024Clinical NLP in Prof. Atul Butte's lab

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    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Evaluating the effectiveness of biomedical fine-tuning for large language models on clinical tasks. J Am Med Inform Assoc. 2025 Jun 01; 32(6):1015-1024. Dorfner FJ, Dada A, Busch F, Makowski MR, Han T, Truhn D, Kleesiek J, Sushil M, Adams LC, Bressem KK. PMID: 40190132.
      View in: PubMed   Mentions:    Fields:    
    2. The MI-CLAIM-GEN checklist for generative artificial intelligence in health. Nat Med. 2025 May; 31(5):1394-1398. Miao BY, Chen IY, Williams CYK, Davidson J, Garcia-Agundez A, Sun S, Zack T, Saria S, Arnaout R, Quer G, Sadaei HJ, Torkamani A, Beaulieu-Jones B, Yu B, Gianfrancesco M, Butte AJ, Norgeot B, Sushil M. PMID: 39915678.
      View in: PubMed   Mentions:    Fields:    
    3. Assessing Large Language Models for Oncology Data Inference From Radiology Reports. JCO Clin Cancer Inform. 2024 Dec; 8:e2400126. Chen LC, Zack T, Demirci A, Sushil M, Miao B, Kasap C, Butte A, Collisson EA, Hong JC. PMID: 39661914.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    4. Revealing the impact of social circumstances on the selection of cancer therapy through natural language processing of social work notes. JAMIA Open. 2024 Dec; 7(4):ooae073. Sun S, Zack T, Williams CYK, Butte AJ, Sushil M. PMID: 39399272; PMCID: PMC11470153.
      View in: PubMed   Mentions: 1  
    5. A comparative study of large language model-based zero-shot inference and task-specific supervised classification of breast cancer pathology reports. J Am Med Inform Assoc. 2024 Oct 01; 31(10):2315-2327. Sushil M, Zack T, Mandair D, Zheng Z, Wali A, Yu YN, Quan Y, Lituiev D, Butte AJ. PMID: 38900207; PMCID: PMC11413420.
      View in: PubMed   Mentions: 8     Fields:    Translation:Humans
    6. Use of a Large Language Model to Assess Clinical Acuity of Adults in the Emergency Department. JAMA Netw Open. 2024 05 01; 7(5):e248895. Williams CYK, Zack T, Miao BY, Sushil M, Wang M, Kornblith AE, Butte AJ. PMID: 38713466; PMCID: PMC11077390.
      View in: PubMed   Mentions: 21     Fields:    Translation:Humans
    7. Evaluating large language models as agents in the clinic. NPJ Digit Med. 2024 Apr 03; 7(1):84. Mehandru N, Miao BY, Almaraz ER, Sushil M, Butte AJ, Alaa A. PMID: 38570554; PMCID: PMC10991271.
      View in: PubMed   Mentions: 19  
    8. CORAL: Expert-Curated Oncology Reports to Advance Language Model Inference. NEJM AI. 2024; 1(4). Sushil M, Kennedy VE, Mandair D, Miao BY, Zack T, Butte AJ. View Publication.
    9. CORAL: Expert-Curated Oncology Reports to Advance Language Model Inference. NEJM AI. 2024 Apr; 1(4). Sushil M, Kennedy VE, Mandair D, Miao BY, Zack T, Butte AJ. PMID: 40255242; PMCID: PMC12007910.
      View in: PubMed   Mentions: 2  
    10. Algorithmic Identification of Treatment-Emergent Adverse Events From Clinical Notes Using Large Language Models: A Pilot Study in Inflammatory Bowel Disease. Clin Pharmacol Ther. 2024 Jun; 115(6):1391-1399. Silverman AL, Sushil M, Bhasuran B, Ludwig D, Buchanan J, Racz R, Parakala M, El-Kamary S, Ahima O, Belov A, Choi L, Billings M, Li Y, Habal N, Liu Q, Tiwari J, Butte AJ, Rudrapatna VA. PMID: 38459719; PMCID: PMC11090709.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    11. Characterisation of digital therapeutic clinical trials: a systematic review with natural language processing. Lancet Digit Health. 2024 Mar; 6(3):e222-e229. Miao BY, Sushil M, Xu A, Wang M, Arneson D, Berkley E, Subash M, Vashisht R, Rudrapatna V, Butte AJ. PMID: 38395542; PMCID: PMC11074920.
      View in: PubMed   Mentions: 4     Fields:    
    12. Cross-institution natural language processing for reliable clinical association studies: a methodological exploration. J Clin Epidemiol. 2024 Mar; 167:111258. Sushil M, Butte AJ, Schuit E, van Smeden M, Leeuwenberg AM. PMID: 38219811.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    13. Topic modeling on clinical social work notes for exploring social determinants of health factors. JAMIA Open. 2024 Apr; 7(1):ooad112. Sun S, Zack T, Williams CYK, Sushil M, Butte AJ. PMID: 38223407; PMCID: PMC10788143.
      View in: PubMed   Mentions: 5  
    14. Bottom-up and top-down paradigms of artificial intelligence research approaches to healthcare data science using growing real-world big data. J Am Med Inform Assoc. 2023 06 20; 30(7):1323-1332. Wang M, Sushil M, Miao BY, Butte AJ. PMID: 37187158; PMCID: PMC10280344.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    15. Are we there yet? Exploring clinical domain knowledge of BERT models. Proceedings of the 20th Workshop on Biomedical Language Processing, Association for Computational Linguistics. 2021; 41-53. Sushil M, Šuster S, Daelemans W. View Publication.
    16. Contextual explanation rules for neural clinical classifiers. Proceedings of the 20th Workshop on Biomedical Language Processing, Association for Computational Linguistics. 2021; 202-212. Sushil M, Šuster S, Daelemans W. View Publication.
    17. Rule induction for global explanation of trained models. Proceedings of the 2018 EMNLP Workshop BlackboxNLP: Analyzing and Interpreting Neural Networks for NLP, Association for Computational Linguistics. 2018; 82-97. Sushil M, Šuster S, Daelemans W. View Publication.
    18. Revisiting neural relation classification in clinical notes with external information. Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis, Association for Computational Linguistics. 2018; 22-28. Šuster S, Sushil M, Daelemans W. View Publication.
    19. Patient representation learning and interpretable evaluation using clinical notes. J Biomed Inform. 2018 08; 84:103-113. Sushil M, Šuster S, Luyckx K, Daelemans W. PMID: 29966746.
      View in: PubMed   Mentions: 12     Fields:    Translation:Humans
    20. Counting trees in Random Forests: Predicting symptom severity in psychiatric intake reports. J Biomed Inform. 2017 Nov; 75S:S112-S119. Scheurwegs E, Sushil M, Tulkens S, Daelemans W, Luyckx K. PMID: 28602906; PMCID: PMC5705466.
      View in: PubMed   Mentions: 9     Fields:    Translation:Humans
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