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Tomiko Oskotsky, MD

Photo of Tomiko Oskotsky, MD
Title(s)Associate Professor of Medicine, Computational Health Scienc
SchoolSchool of Medicine
Address10 Koret Way, #001
San Francisco CA 94117
ORCID ORCID Icon0000-0001-7393-5120 Additional info
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    Other Positions
    Title(s)Bioinformatics Programmer


    Collapse Biography 
    Collapse education and training
    University of California Los Angeles, Los Angeles, CABSBiochemistry
    Medical College of Wisconsin, Milwaukee, WIMD

    Collapse Overview 
    Collapse overview
    Tomiko Oskotsky, MD, is an Associate Professor of Medicine in the Division of Clinical Informatics and Digital Transformation (Doc-IT) and a Physician Scientist at the UCSF Bakar Computational Health Sciences Institute (BCHSI). She has expansive expertise in harnessing clinical and multi-omics datasets and applying bioinformatics approaches to drive therapeutic and diagnostic breakthroughs in Alzheimer’s disease, endometriosis, and preterm birth. She directs the March of Dimes Prematurity Research Data Repository and the UCSF AI4ALL program, expanding the reach of machine learning and AI in both biomedical discovery and education. Dr. Oskotsky has advanced the field through pioneering initiatives, including co-leading a DREAM Challenge on the vaginal microbiome, publishing extensively, and forging collaborations across academia. Her work centers on computational approaches to precision medicine, with a focus on women’s health and complex diseases.
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    Collapse Research 
    Collapse research activities and funding
    Single cell analytics and drug discovery at the endometrial-myometrial junction in symptomatic adenomyosis
    NIH/NICHD R21HD114953Aug 1, 2024 - Jul 31, 2026
    Role: Co-Investigator
    UCSF Stanford Endometriosis Center for Discovery, Innovation, Training and Community Engagement
    NIH/NICHD 1P01HD106414Aug 1, 2021 - Jul 31, 2026
    Role: Co-Investigator
    Trio analysis of Recurrent pregnancy loss Integrated bioinformatics genOmics Study (TRIOS)
    NIH/NICHD R01HD105256May 1, 2021 - Mar 31, 2026
    Role: Co-Investigator
    Towards an Integrated Data Repository for Preterm Birth
    March of Dimes 60982053-50185Jan 1, 2020 - Dec 31, 2025
    Role: Co-Investigator; Data Repository Lead / Scientific Director
    An Integrative Multi-Omics Approach to Elucidate Sex-Specific Differences in Alzheimer’s Disease
    NIH/NIA R01AG060393Sep 1, 2018 - May 31, 2023
    Role: Co-Investigator

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    Collapse Featured Publications

    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Benchmarking large language models for predictive modeling in biomedical research with a focus on reproductive health. Cell Rep Med. 2026 Feb 17; 7(2):102594. Sarwal R, Tarca V, Dubin CA, Kalavros N, Bhatti G, Bhattacharya S, Butte A, Romero R, Stolovitzky G, Oskotsky TT, Tarca AL, Sirota M. PMID: 41707656; PMCID: PMC12923944.
      View in: PubMed   Mentions:
    2. Leveraging health records to identify diagnoses associated with recurrent pregnancy loss across two medical centers. iScience. 2026 Feb 20; 29(2):114633. Roger J, Xie F, Costello JM, Tang AS, Liu J, Oskotsky TT, Woldemariam SR, Kosti I, Le BL, Snyder MP, Giudice LC, Shaw GM, Stevenson DK, Rajkovic A, Glymour MM, Torgerson D, Aghaeepour N, Cakmak H, Lathi RB, Sirota M. PMID: 41660242; PMCID: PMC12877842.
      View in: PubMed   Mentions:
    3. Compression-Enabled Joint Entropy Estimation for Seizure Detection on Human Intracortical Electroencephalography. IEEE Trans Biomed Eng. 2025 Dec; 72(12):3440-3452. Yamada L, Oskotsky T, Nuyujukian P. PMID: 41231686.
      View in: PubMed   Mentions:
    4. Microbiome preterm birth DREAM challenge: Crowdsourcing machine learning approaches to advance preterm birth research. Cell Rep Med. 2025 Dec 16; 6(12):102428. Golob JL, Oskotsky TT, Tang AS, Roldan A, Chung V, Ha CWY, Wong RJ, Flynn KJ, Chai R, Dubin C, Parraga-Leo A, Wibrand C, Minot SS, Oskotsky B, Andreoletti G, Kosti I, Bletz J, Nelson A, Gao J, Wei Z, Chen G, Tang ZZ, Novielli P, Romano D, Pantaleo E, Amoroso N, Monaco A, Vacca M, De Angelis M, Bellotti R, Tangaro S, Wang Z, Yao J, Goel A, Mao J, Wang H, Zhang Y, Tewari A, Kuntzleman A, Bigcraft I, Techtmann S, Bae D, Kim E, Jeon J, Joe S, Preterm Birth DREAM Community, Theis KR, Ng S, Lee YS, Diaz-Gimeno P, Bennett PR, MacIntyre DA, Stolovitzky G, Lynch SV, Albrecht J, Gomez-Lopez N, Romero R, Stevenson DK, Aghaeepour N, Tarca AL, Costello JC, Sirota M. PMID: 41205590; PMCID: PMC12765831.
      View in: PubMed   Mentions:
    5. Transcriptomic comparison of early onset preeclampsia and placenta accreta identifies inverse trophoblast and decidua functions at the maternal-fetal interface. NPJ Womens Health. 2025; 3(1):59. Yin O, Almonte-Loya A, Appierdo R, Yang M, Yilmaz BD, Oskotsky TT, Gonzalez-Velez JM, Giudice LC, Afshar Y, Sirota M. PMID: 41141914; PMCID: PMC12549338.
      View in: PubMed   Mentions:
    6. Mondo: Integrating Disease Terminology Across Communities. Genetics. 2025 Oct 06. Vasilevsky NA, Toro S, Matentzoglu N, Flack JE, Mullen KR, Hegde H, Gehrke S, Whetzel PL, Shwetar Y, Harris NL, Ngu MS, Alyea GL, Kane MS, Roncaglia P, Sid E, Thaxton CL, Wood V, Abraham RS, Achatz MI, Ajuyah P, Amberger JS, Babb L, Baker J, Balhoff JP, Berg JS, Bhalla A, Bofill-De Ros X, Braun IR, Broeren EC, Byer BK, Byrne AB, Callahan TJ, Carmody LC, Chan LE, Clause AR, Cohen JS, DeLuca M, Deuitch NT, Flowers M, Fraser J, Fujiwara T, Gitau V, Goldstein JL, Gration D, Groza T, Gyori BM, Hankey W, Hilton JA, Himmelstein DS, Hong SS, Hoyt CT, Huether R, Hurwitz E, Jacobsen JOB, Kikuchi A, Köhler S, Korn DR, Lagorce D, Laraway BJ, Li JY, Malheiro AJ, McLaughlin J, Meldal BHM, Mohan S, Moxon SAT, Munoz-Torres MC, Nelson TH, Nicholas FW, Ochoa D, Olson D, Oprea TI, Oskotsky TT, Osumi-Sutherland D, Paris K, Parkinson HE, Pendlington ZM, Peng XP, Pizzino A, Plon SE, Powell BC, Ratliff JC, Rehm HL, Remennik L, Riggs ER, Roberts S, Robinson PN, Ross JE, Schaper K, Schilder BM, Schmidt JL, Sharp EW, Similuk MN, Smedley D, Sneddon TP, Sparks R, Stefancsik R, Stupp GS, Sundar S, Takatsuki T, Tammen I, Tshering KC, Unni DR, Valasek E, Vanderver A, Wagner AH, Webb RF, Welter D, Yaya-Stupp D, Zankl A, Zhang XA, McMurry JA, Chute CG, Hamosh A, Mungall CJ, Haendel MA. PMID: 41052288.
      View in: PubMed   Mentions:
    7. Delirium in hospitalized COVID-19 patients is associated with dynamic changes in peripheral immune gene expression. Geroscience. 2025 Sep 22. LaHue SC, Takegami N, Simmasalam R, Baqai A, Munoz E, Sikri A, de Courson TDB, Singhal NS, Eckalbar W, Langelier CR, Hendrickson CM, Calfee CS, Erle DJ, Krummel MF, Woodruff PG, Oskotsky T, Sirota M, Ferguson A, Douglas VC, Newman JC, Pleasure SJ, Wilson MR, Singhal NS. PMID: 40982210.
      View in: PubMed   Mentions:    Fields:    
    8. Decoding subphenotypes in electronic medical records within late-onset Alzheimer's disease reveals heterogeneity and sex-specific differences. medRxiv. 2025 Sep 08. Katsuhara Y, Khan U, Miller ZA, Allen IE, Oskotsky TT, Sirota M, Tang AS. PMID: 40313288; PMCID: PMC12045436.
      View in: PubMed   Mentions:
    9. Leveraging electronic health records from two hospital systems identifies male infertility-associated comorbidities across time. Commun Med (Lond). 2025 Sep 01; 5(1):380. Woldemariam SR, Xie F, Roldan A, Roger J, Tang AS, Oskotsky TT, Stevenson DK, Lathi RB, Rajkovic A, Allen IE, Aghaeepour N, Eisenberg M, Sirota M. PMID: 40890520; PMCID: PMC12402078.
      View in: PubMed   Mentions: 1  
    10. Anticlustering for sample allocation to minimize batch effects. Cell Rep Methods. 2025 Aug 18; 5(8):101137. Papenberg M, Wang C, Diop M, Bukhari SH, Oskotsky B, Davidson BR, Vo KC, Liu B, Irwin JC, Combes AJ, Gaudilliere B, Li J, Stevenson DK, Klau GW, Giudice LC, Sirota M, Oskotsky TT. PMID: 40829575; PMCID: PMC12461633.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    11. Single-Cell Profiling Reveals Altered Endometrial Cellular Features Across the Menstrual Cycle in Endometriosis Patients. bioRxiv. 2025 Aug 14. Almonte-Loya A, Wang W, Houshdaran S, Tang X, Flynn E, Liu B, Kushnoor D, Nezhat C, Vilella F, Simon C, Vo KC, Casillas A, Khan U, Serras CP, Oskotsky TT, Huang D, Vallve-Juanico J, Irwin J, Combes A, Sirota M, Fragiadakis G, Giudice L. PMID: 40777241; PMCID: PMC12330773.
      View in: PubMed   Mentions:
    12. Comorbidity analysis and clustering of endometriosis patients using electronic health records. Cell Rep Med. 2025 Aug 19; 6(8):102245. Khan U, Oskotsky TT, Yilmaz BD, Roger J, Gjoni K, Irwin JC, Opoku-Anane J, Elhadad N, Giudice LC, Sirota M. PMID: 40749680; PMCID: PMC12432376.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    13. Comorbidities associated with a clinically-recognized delirium diagnosis in the hospital using real world data. Commun Med (Lond). 2025 Jul 22; 5(1):304. Kodama L, Woldemariam SR, Tang AS, Li Y, Kornak J, Allen IE, Raphael E, Oskotsky TT, Sirota M. PMID: 40696117; PMCID: PMC12284072.
      View in: PubMed   Mentions: 1  
    14. Cell-type-directed network-correcting combination therapy for Alzheimer's disease. Cell. 2025 Oct 02; 188(20):5516-5534.e18. Li Y, Pereda Serras C, Blumenfeld J, Xie M, Hao Y, Deng E, Chun YY, Holtzman J, An A, Yoon SY, Tang X, Rao A, Woldemariam S, Tang A, Zhang A, Simms J, Lo I, Oskotsky T, Keiser MJ, Huang Y, Sirota M. PMID: 40695276; PMCID: PMC12313259.
      View in: PubMed   Mentions: 1     Fields:    
    15. Diagnostic Reversion in Dementia Care: A Real-World Analysis of Mild Cognitive Impairment Diagnoses Following Dementia in a Large Electronic Medical Record System. medRxiv. 2025 Jul 17. Miramontes S, Khan U, Zimmerman S, Ferguson EL, Mills H, Oskotsky B, Phelps E, Oskotsky TT, Capra AJ, Glymour MM, Sirota M, Tsoy E. PMID: 40791721; PMCID: PMC12338929.
      View in: PubMed   Mentions:
    16. InSight: AI Mobile Screening Tool for Multiple Eye Disease Detection using Multimodal Fusion. arXiv. 2025; (2507.12669). Raghu Ananya, Raghu Anisha, Tang AS, Paulus YM, Kim TN, Oskotsky TT. View Publication.
    17. Benchmarking Large Language Models for Predictive Modeling in Biomedical Research With a Focus on Reproductive Health. bioRxiv. 2025 Jul 10. Sarwal R, Tarca V, Dubin C, Kalavros N, Bhatti G, Bhattacharya S, Butte A, Romero R, Stolovitzky G, Oskotsky TT, Tarca AL, Sirota M. PMID: 40747416; PMCID: PMC12312170.
      View in: PubMed   Mentions:
    18. A Transcriptomics-Based Computational Drug Repositioning Pipeline Identifies Simvastatin And Primaquine As Novel Therapeutics For Endometriosis Pain. bioRxiv. 2025 May 30. Oskotsky TT, Tang X, Arthurs E, Govil A, Abbasi F, Bhoja A, Bunis DJ, Lau A, Einhaus J, Diop M, Irwin JC, Gaudilliere B, Stevenson DK, Giudice LC, McAllister SL, Sirota M. PMID: 40502156; PMCID: PMC12154721.
      View in: PubMed   Mentions:
    19. AI-guided precision parenteral nutrition for neonatal intensive care units. Nat Med. 2025 Jun; 31(6):1882-1894. Phongpreecha T, Ghanem M, Reiss JD, Oskotsky TT, Mataraso SJ, De Francesco D, Reincke SM, Espinosa C, Chung P, Ng T, Costello JM, Sequoia JA, Razdan S, Xie F, Berson E, Kim Y, Seong D, Szeto MY, Myers F, Gu H, Feister J, Verscaj CP, Rose LA, Sin LWY, Oskotsky B, Roger J, Shu CH, Shome S, Yang LK, Tan Y, Levitte S, Wong RJ, Gaudillière B, Angst MS, Montine TJ, Kerner JA, Keller RL, Shaw GM, Sylvester KG, Fuerch J, Chock V, Gaskari S, Stevenson DK, Sirota M, Prince LS, Aghaeepour N. PMID: 40133525; PMCID: PMC12176641.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    20. Exposure to autoimmune disorders is associated with increased Alzheimer's disease risk in a multi-site electronic health record analysis. Cell Rep Med. 2025 Mar 18; 6(3):101980. Ramey GD, Tang A, Phongpreecha T, Yang MM, Woldemariam SR, Oskotsky TT, Montine TJ, Allen I, Miller ZA, Aghaeepour N, Capra JA, Sirota M. PMID: 39999839; PMCID: PMC11970322.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    21. Peripheral blood mononuclear cell transcriptomic trajectories reveal dynamic regulation of inflammatory actors in delirium. medRxiv. 2025 Feb 20. LaHue SC, Takegami N, Simmasalam R, Baqai A, Munoz E, Sikri A, de Courson TDB, Singhal NS, Eckalbar W, Langelier CR, Hendrickson CM, Calfee CS, Erle DJ, Krummel MF, Woodruff PG, Oskotsky T, Sirota M, Ferguson A, Douglas VC, Newman JC, Pleasure SJ, Wilson MR, COMET consortium, Singhal NS. PMID: 40034792; PMCID: PMC11875240.
      View in: PubMed   Mentions:
    22. Pre-conception clinical risk factors differ between spontaneous and indicated preterm birth in a densely phenotyped EHR cohort. BMC Pregnancy Childbirth. 2025 Feb 12; 25(1):149. Costello JM, Takasuka H, Roger J, Yin O, Tang A, Oskotsky T, Sirota M, Capra JA. PMID: 39939846; PMCID: PMC11817080.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    23. Real world perspectives on endometriosis disease phenotyping through surgery, omics, health data, and artificial intelligence. NPJ Womens Health. 2025; 3(1):8. Nezhat CR, Oskotsky TT, Robinson JF, Fisher SJ, Tsuei A, Liu B, Irwin JC, Gaudilliere B, Sirota M, Stevenson DK, Giudice LC. PMID: 39926583; PMCID: PMC11802455.
      View in: PubMed   Mentions: 3  
    24. VMAP: Vaginal Microbiome Atlas during Pregnancy. JAMIA Open. 2024 Oct; 7(3):ooae099. Parraga-Leo A, Oskotsky TT, Oskotsky B, Wibrand C, Roldan A, Tang AS, Ha CWY, Wong RJ, Minot SS, Andreoletti G, Kosti I, Theis KR, Ng S, Lee YS, Diaz-Gimeno P, Bennett PR, MacIntyre DA, Lynch SV, Romero R, Tarca AL, Stevenson DK, Aghaeepour N, Golob JL, Sirota M. PMID: 39345789; PMCID: PMC11430916.
      View in: PubMed   Mentions: 1  
    25. Harnessing EHR data for health research. Nat Med. 2024 Jul; 30(7):1847-1855. Tang AS, Woldemariam SR, Miramontes S, Norgeot B, Oskotsky TT, Sirota M. PMID: 38965433.
      View in: PubMed   Mentions: 12     Fields:    Translation:Humans
    26. A scalable platform for acquisition of high-fidelity human intracranial EEG with minimal clinical burden. PLoS One. 2024; 19(6):e0305009. Yamada L, Oskotsky T, Nuyujukian P, Stanford Comprehensive Epilepsy Center, Stanford Pediatric Epilepsy Center. PMID: 38870212; PMCID: PMC11175507.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    27. Alzheimer's disease as a women's health challenge: a call for action on integrative precision medicine approaches. NPJ Womens Health. 2024; 2(1):17. Miramontes S, Pereda Serras C, Woldemariam SR, Khan U, Li Y, Tang AS, Tsoy E, Oskotsky TT, Sirota M. PMID: 38778871; PMCID: PMC11106001.
      View in: PubMed   Mentions: 3  
    28. Data-driven insights can transform women's reproductive health. NPJ Womens Health. 2024; 2(1):14. Oskotsky TT, Yin O, Khan U, Arnaout L, Sirota M. PMID: 38770215; PMCID: PMC11104016.
      View in: PubMed   Mentions: 2  
    29. Identifying therapeutic candidates for endometriosis through a transcriptomics-based drug repositioning approach. iScience. 2024 Apr 19; 27(4):109388. Oskotsky TT, Bhoja A, Bunis D, Le BL, Tang AS, Kosti I, Li C, Houshdaran S, Sen S, Vallvé-Juanico J, Wang W, Arthurs E, Govil A, Mahoney L, Lang L, Gaudilliere B, Stevenson DK, Irwin JC, Giudice LC, McAllister SL, Sirota M. PMID: 38510116; PMCID: PMC10952035.
      View in: PubMed   Mentions: 7  
    30. Leveraging electronic health records and knowledge networks for Alzheimer's disease prediction and sex-specific biological insights. Nat Aging. 2024 Mar; 4(3):379-395. Tang AS, Rankin KP, Cerono G, Miramontes S, Mills H, Roger J, Zeng B, Nelson C, Soman K, Woldemariam S, Li Y, Lee A, Bove R, Glymour M, Aghaeepour N, Oskotsky TT, Miller Z, Allen IE, Sanders SJ, Baranzini S, Sirota M. PMID: 38383858; PMCID: PMC10950787.
      View in: PubMed   Mentions: 26     Fields:    Translation:Humans
    31. Discovery of sparse, reliable omic biomarkers with Stabl. Nat Biotechnol. 2024 Oct; 42(10):1581-1593. Hédou J, Maric I, Bellan G, Einhaus J, Gaudillière DK, Ladant FX, Verdonk F, Stelzer IA, Feyaerts D, Tsai AS, Ganio EA, Sabayev M, Gillard J, Amar J, Cambriel A, Oskotsky TT, Roldan A, Golob JL, Sirota M, Bonham TA, Sato M, Diop M, Durand X, Angst MS, Stevenson DK, Aghaeepour N, Montanari A, Gaudillière B. PMID: 38168992; PMCID: PMC11217152.
      View in: PubMed   Mentions: 24     Fields:    Translation:Humans
    32. Microbiome preterm birth DREAM challenge: Crowdsourcing machine learning approaches to advance preterm birth research. Cell Rep Med. 2024 01 16; 5(1):101350. Golob JL, Oskotsky TT, Tang AS, Roldan A, Chung V, Ha CWY, Wong RJ, Flynn KJ, Parraga-Leo A, Wibrand C, Minot SS, Oskotsky B, Andreoletti G, Kosti I, Bletz J, Nelson A, Gao J, Wei Z, Chen G, Tang ZZ, Novielli P, Romano D, Pantaleo E, Amoroso N, Monaco A, Vacca M, De Angelis M, Bellotti R, Tangaro S, Kuntzleman A, Bigcraft I, Techtmann S, Bae D, Kim E, Jeon J, Joe S, Preterm Birth DREAM Community, Theis KR, Ng S, Lee YS, Diaz-Gimeno P, Bennett PR, MacIntyre DA, Stolovitzky G, Lynch SV, Albrecht J, Gomez-Lopez N, Romero R, Stevenson DK, Aghaeepour N, Tarca AL, Costello JC, Sirota M. PMID: 38134931; PMCID: PMC10829755.
      View in: PubMed   Mentions: 24     Fields:    Translation:Humans
    33. MaLiAmPi enables generalizable and taxonomy-independent microbiome features from technically diverse 16S-based microbiome studies. Cell Rep Methods. 2023 11 20; 3(11):100639. Minot SS, Garb B, Roldan A, Tang AS, Oskotsky TT, Rosenthal C, Hoffman NG, Sirota M, Golob JL. PMID: 37939711; PMCID: PMC10694490.
      View in: PubMed   Mentions: 5     Fields:    
    34. Endometriosis in the era of precision medicine and impact on sexual and reproductive health across the lifespan and in diverse populations. FASEB J. 2023 09; 37(9):e23130. Giudice LC, Oskotsky TT, Falako S, Opoku-Anane J, Sirota M. PMID: 37641572; PMCID: PMC10503213.
      View in: PubMed   Mentions: 24     Fields:    Translation:Humans
    35. Target-agnostic drug prediction integrated with medical record analysis uncovers differential associations of statins with increased survival in COVID-19 patients. PLoS Comput Biol. 2023 05; 19(5):e1011050. Sperry MM, Oskotsky TT, Maric I, Kaushal S, Takeda T, Horvath V, Powers RK, Rodas M, Furlong B, Soong M, Prabhala P, Goyal G, Carlson KE, Wong RJ, Kosti I, Le BL, Logue J, Hammond H, Frieman M, Stevenson DK, Ingber DE, Sirota M, Novak R. PMID: 37146076; PMCID: PMC10191356.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    36. Similarities and differences in Alzheimer's dementia comorbidities in racialized populations identified from electronic medical records. Commun Med (Lond). 2023 Apr 08; 3(1):50. Woldemariam SR, Tang AS, Oskotsky TT, Yaffe K, Sirota M. PMID: 37031271; PMCID: PMC10082816.
      View in: PubMed   Mentions: 3  
    37. Leveraging electronic health records to identify risk factors for recurrent pregnancy loss across two medical centers: a case-control study. Res Sq. 2023 Mar 31. Roger J, Xie F, Costello J, Tang A, Liu J, Oskotsky T, Woldemariam S, Kosti I, Le B, Snyder MP, Giudice LC, Torgerson D, Shaw GM, Stevenson DK, Rajkovic A, Glymour MM, Aghaeepour N, Cakmak H, Lathi RB, Sirota M. PMID: 36993325; PMCID: PMC10055527.
      View in: PubMed   Mentions:
    38. Data-driven longitudinal characterization of neonatal health and morbidity. Sci Transl Med. 2023 02 15; 15(683):eadc9854. De Francesco D, Reiss JD, Roger J, Tang AS, Chang AL, Becker M, Phongpreecha T, Espinosa C, Morin S, Berson E, Thuraiappah M, Le BL, Ravindra NG, Payrovnaziri SN, Mataraso S, Kim Y, Xue L, Rosenstein MG, Oskotsky T, Maric I, Gaudilliere B, Carvalho B, Bateman BT, Angst MS, Prince LS, Blumenfeld YJ, Benitz WE, Fuerch JH, Shaw GM, Sylvester KG, Stevenson DK, Sirota M, Aghaeepour N. PMID: 36791208; PMCID: PMC10197092.
      View in: PubMed   Mentions: 18     Fields:    Translation:Humans
    39. Large-scale placenta DNA methylation integrated analysis reveals fetal sex-specific differentially methylated CpG sites and regions. Sci Rep. 2022 06 07; 12(1):9396. Andrews SV, Yang IJ, Froehlich K, Oskotsky T, Sirota M. PMID: 35672357; PMCID: PMC9174475.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansCells
    40. Bioinformatics Analysis of Publicly Available Single-Nuclei Transcriptomics Alzheimer's Disease Datasets Reveals APOE Genotype-Specific Changes Across Cell Types in Two Brain Regions. Front Aging Neurosci. 2022; 14:749991. Belonwu SA, Li Y, Bunis DG, Rao AA, Solsberg CW, Oskotsky T, Taubes AL, Grone B, Zalocusky KA, Fragiadakis GK, Huang Y, Sirota M. PMID: 35572130; PMCID: PMC9093608.
      View in: PubMed   Mentions: 4  
    41. Deep phenotyping of Alzheimer's disease leveraging electronic medical records identifies sex-specific clinical associations. Nat Commun. 2022 02 03; 13(1):675. Tang AS, Oskotsky T, Havaldar S, Mantyh WG, Bicak M, Solsberg CW, Woldemariam S, Zeng B, Hu Z, Oskotsky B, Dubal D, Allen IE, Glicksberg BS, Sirota M. PMID: 35115528; PMCID: PMC8814236.
      View in: PubMed   Mentions: 23     Fields:    Translation:Humans
    42. Nurturing diversity and inclusion in AI in Biomedicine through a virtual summer program for high school students. PLoS Comput Biol. 2022 01; 18(1):e1009719. Oskotsky T, Bajaj R, Burchard J, Cavazos T, Chen I, Connell WT, Eaneff S, Grant T, Kanungo I, Lindquist K, Myers-Turnbull D, Naing ZZC, Tang A, Vora B, Wang J, Karim I, Swadling C, Yang J, AI4ALL Student Cohort 2020, Lindstaedt B, Sirota M. PMID: 35100256; PMCID: PMC8830787.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    43. Author Correction: Experimental and real-world evidence supporting the computational repurposing of bumetanide for APOE4-related Alzheimer's disease. Nat Aging. 2021 Dec; 1(12):1202. Taubes A, Nova P, Zalocusky KA, Kosti I, Bicak M, Zilberter MY, Hao Y, Yoon SY, Oskotsky T, Pineda S, Chen B, Aery Jones EA, Choudhary K, Grone B, Balestra ME, Chaudhry F, Paranjpe I, De Freitas J, Koutsodendris N, Chen N, Wang C, Chang W, An A, Glicksberg BS, Sirota M, Huang Y. PMID: 37117528.
      View in: PubMed   Mentions: 1     Fields:    
    44. Mortality Risk Among Patients With COVID-19 Prescribed Selective Serotonin Reuptake Inhibitor Antidepressants. JAMA Netw Open. 2021 11 01; 4(11):e2133090. Oskotsky T, Maric I, Tang A, Oskotsky B, Wong RJ, Aghaeepour N, Sirota M, Stevenson DK. PMID: 34779847; PMCID: PMC8593759.
      View in: PubMed   Mentions: 77     Fields:    Translation:HumansCells
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