Matthew Lohse, PhD

Title(s)Staff Research Associate IV, Microbiology and Immunology
SchoolSchool of Medicine
Address600 16th St, #N374
San Francisco CA 94158
Phone415-476-8097
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    University of California, San FranciscoPh.D.2010 Graduate Division (Biochemistry)

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Variation in transcription regulator expression underlies differences in white-opaque switching between the SC5314 reference strain and the majority of Candida albicans clinical isolates. Genetics. 2023 11 01; 225(3). Lohse MB, Ziv N, Johnson AD. PMID: 37811798; PMCID: PMC10627253.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    2. Broad susceptibility of Candida auris strains to 8-hydroxyquinolines and mechanisms of resistance. mBio. 2023 08 31; 14(4):e0137623. Lohse MB, Laurie MT, Levan S, Ziv N, Ennis CL, Nobile CJ, DeRisi J, Johnson AD. PMID: 37493629; PMCID: PMC10470496.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    3. Broad sensitivity of Candida auris strains to quinolones and mechanisms of resistance. bioRxiv. 2023 Feb 17. Lohse MB, Laurie MT, Levan S, Ziv N, Ennis CL, Nobile CJ, DeRisi J, Johnson AD. PMID: 36824717; PMCID: PMC9949084.
      View in: PubMed   Mentions:
    4. Farnesol and phosphorylation of the transcriptional regulator Efg1 affect Candida albicans white-opaque switching rates. PLoS One. 2023; 18(1):e0280233. Brenes LR, Johnson AD, Lohse MB. PMID: 36662710; PMCID: PMC9858334.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    5. A Screen for Small Molecules to Target Candida albicans Biofilms. J Fungi (Basel). 2020 Dec 27; 7(1). Lohse MB, Ennis CL, Hartooni N, Johnson AD, Nobile CJ. PMID: 33375490; PMCID: PMC7824004.
      View in: PubMed   Mentions: 2  
    6. An Opaque Cell-Specific Expression Program of Secreted Proteases and Transporters Allows Cell-Type Cooperation in Candida albicans. Genetics. 2020 10; 216(2):409-429. Lohse MB, Brenes LR, Ziv N, Winter MB, Craik CS, Johnson AD. PMID: 32839241; PMCID: PMC7536846.
      View in: PubMed   Mentions: 3     Fields:    Translation:Animals
    7. A Set of Diverse Genes Influence the Frequency of White-Opaque Switching in Candida albicans. G3 (Bethesda). 2020 08 05; 10(8):2593-2600. Brenes LR, Lohse MB, Hartooni N, Johnson AD. PMID: 32487674; PMCID: PMC7407467.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimalsCells
    8. Combination of Antifungal Drugs and Protease Inhibitors Prevent Candida albicans Biofilm Formation and Disrupt Mature Biofilms. Front Microbiol. 2020; 11:1027. Lohse MB, Gulati M, Craik CS, Johnson AD, Nobile CJ. PMID: 32523574; PMCID: PMC7261846.
      View in: PubMed   Mentions: 15  
    9. A Selective Serotonin Reuptake Inhibitor, a Proton Pump Inhibitor, and Two Calcium Channel Blockers Inhibit Candida albicans Biofilms. Microorganisms. 2020 May 18; 8(5). Nobile CJ, Ennis CL, Hartooni N, Johnson AD, Lohse MB. PMID: 32443498; PMCID: PMC7285287.
      View in: PubMed   Mentions: 7  
    10. A population shift between two heritable cell types of the pathogen Candida albicans is based both on switching and selective proliferation. Proc Natl Acad Sci U S A. 2019 Dec 26; 116(52):26918-26924. Dalal CK, Zuleta IA, Lohse MB, Zordan RE, El-Samad H, Johnson AD. PMID: 31822605; PMCID: PMC6936367.
      View in: PubMed   Mentions: 6     Fields:    
    11. Candida albicans white and opaque cells exhibit distinct spectra of organ colonization in mouse models of infection. PLoS One. 2019; 14(6):e0218037. Takagi J, Singh-Babak SD, Lohse MB, Dalal CK, Johnson AD. PMID: 31170229; PMCID: PMC6553767.
      View in: PubMed   Mentions: 11     Fields:    Translation:Animals
    12. In Vitro Culturing and Screening of Candida albicans Biofilms. Curr Protoc Microbiol. 2018 08; 50(1):e60. Gulati M, Lohse MB, Ennis CL, Gonzalez RE, Perry AM, Bapat P, Arevalo AV, Rodriguez DL, Nobile CJ. PMID: 29995344; PMCID: PMC6105388.
      View in: PubMed   Mentions: 35     Fields:    Translation:HumansAnimals
    13. Development and regulation of single- and multi-species Candida albicans biofilms. Nat Rev Microbiol. 2018 Jan; 16(1):19-31. Lohse MB, Gulati M, Johnson AD, Nobile CJ. PMID: 29062072; PMCID: PMC5726514.
      View in: PubMed   Mentions: 201     Fields:    Translation:HumansAnimals
    14. Sensitivity of White and Opaque Candida albicans Cells to Antifungal Drugs. Antimicrob Agents Chemother. 2017 08; 61(8). Craik VB, Johnson AD, Lohse MB. PMID: 28507115; PMCID: PMC5527646.
      View in: PubMed   Mentions: 5     Fields:    Translation:Animals
    15. Assessment and Optimizations of Candida albicans In Vitro Biofilm Assays. Antimicrob Agents Chemother. 2017 05; 61(5). Lohse MB, Gulati M, Valle Arevalo A, Fishburn A, Johnson AD, Nobile CJ. PMID: 28289028; PMCID: PMC5404589.
      View in: PubMed   Mentions: 33     Fields:    Translation:HumansAnimals
    16. Phenotypic Profiling Reveals that Candida albicans Opaque Cells Represent a Metabolically Specialized Cell State Compared to Default White Cells. mBio. 2016 11 22; 7(6). Ene IV, Lohse MB, Vladu AV, Morschhäuser J, Johnson AD, Bennett RJ. PMID: 27879329; PMCID: PMC5120136.
      View in: PubMed   Mentions: 30     Fields:    Translation:AnimalsCells
    17. Global Identification of Biofilm-Specific Proteolysis in Candida albicans. mBio. 2016 09 13; 7(5). Winter MB, Salcedo EC, Lohse MB, Hartooni N, Gulati M, Sanchez H, Takagi J, Hube B, Andes DR, Johnson AD, Craik CS, Nobile CJ. PMID: 27624133; PMCID: PMC5021810.
      View in: PubMed   Mentions: 35     Fields:    Translation:AnimalsCells
    18. Systematic Genetic Screen for Transcriptional Regulators of the Candida albicans White-Opaque Switch. Genetics. 2016 08; 203(4):1679-92. Lohse MB, Ene IV, Craik VB, Hernday AD, Mancera E, Morschhäuser J, Bennett RJ, Johnson AD. PMID: 27280690; PMCID: PMC4981270.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansAnimals
    19. Ssn6 Defines a New Level of Regulation of White-Opaque Switching in Candida albicans and Is Required For the Stochasticity of the Switch. mBio. 2016 Jan 26; 7(1):e01565-15. Hernday AD, Lohse MB, Nobile CJ, Noiman L, Laksana CN, Johnson AD. PMID: 26814177; PMCID: PMC4742700.
      View in: PubMed   Mentions: 25     Fields:    Translation:AnimalsCells
    20. Identification and Characterization of Wor4, a New Transcriptional Regulator of White-Opaque Switching. G3 (Bethesda). 2016 Jan 15; 6(3):721-9. Lohse MB, Johnson AD. PMID: 26772749; PMCID: PMC4777133.
      View in: PubMed   Mentions: 34     Fields:    Translation:AnimalsCells
    21. Genome-Wide Chromatin Immunoprecipitation in Candida albicans and Other Yeasts. Methods Mol Biol. 2016; 1361:161-84. Lohse MB, Kongsomboonvech P, Madrigal M, Hernday AD, Nobile CJ. PMID: 26483022; PMCID: PMC4773921.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    22. Structure of a new DNA-binding domain which regulates pathogenesis in a wide variety of fungi. Proc Natl Acad Sci U S A. 2014 Jul 22; 111(29):10404-10. Lohse MB, Rosenberg OS, Cox JS, Stroud RM, Finer-Moore JS, Johnson AD. PMID: 24994900; PMCID: PMC4115540.
      View in: PubMed   Mentions: 11     Fields:    Translation:AnimalsCells
    23. How duplicated transcription regulators can diversify to govern the expression of nonoverlapping sets of genes. Genes Dev. 2014 Jun 15; 28(12):1272-7. Pérez JC, Fordyce PM, Lohse MB, Hanson-Smith V, DeRisi JL, Johnson AD. PMID: 24874988; PMCID: PMC4066398.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansAnimalsCells
    24. Structure of the transcriptional network controlling white-opaque switching in Candida albicans. Mol Microbiol. 2013 Oct; 90(1):22-35. Hernday AD, Lohse MB, Fordyce PM, Nobile CJ, DeRisi JL, Johnson AD. PMID: 23855748; PMCID: PMC3888361.
      View in: PubMed   Mentions: 87     Fields:    Translation:HumansAnimalsCells
    25. Identification and characterization of a previously undescribed family of sequence-specific DNA-binding domains. Proc Natl Acad Sci U S A. 2013 May 07; 110(19):7660-5. Lohse MB, Hernday AD, Fordyce PM, Noiman L, Sorrells TR, Hanson-Smith V, Nobile CJ, DeRisi JL, Johnson AD. PMID: 23610392; PMCID: PMC3651432.
      View in: PubMed   Mentions: 53     Fields:    Translation:AnimalsCells
    26. A conserved transcriptional regulator governs fungal morphology in widely diverged species. Genetics. 2012 Feb; 190(2):511-21. Cain CW, Lohse MB, Homann OR, Sil A, Johnson AD. PMID: 22095082; PMCID: PMC3276625.
      View in: PubMed   Mentions: 45     Fields:    Translation:AnimalsCells
    27. Temporal anatomy of an epigenetic switch in cell programming: the white-opaque transition of C. albicans. Mol Microbiol. 2010 Oct; 78(2):331-43. Lohse MB, Johnson AD. PMID: 20735781; PMCID: PMC3057202.
      View in: PubMed   Mentions: 26     Fields:    Translation:Animals
    28. Distinct class of DNA-binding domains is exemplified by a master regulator of phenotypic switching in Candida albicans. Proc Natl Acad Sci U S A. 2010 Aug 10; 107(32):14105-10. Lohse MB, Zordan RE, Cain CW, Johnson AD. PMID: 20660774; PMCID: PMC2922561.
      View in: PubMed   Mentions: 41     Fields:    Translation:HumansAnimalsCells
    29. White-opaque switching in Candida albicans. Curr Opin Microbiol. 2009 Dec; 12(6):650-4. Lohse MB, Johnson AD. PMID: 19853498; PMCID: PMC2812476.
      View in: PubMed   Mentions: 80     Fields:    Translation:AnimalsCells
    30. Differential phagocytosis of white versus opaque Candida albicans by Drosophila and mouse phagocytes. PLoS One. 2008 Jan 23; 3(1):e1473. Lohse MB, Johnson AD. PMID: 18213381; PMCID: PMC2198939.
      View in: PubMed   Mentions: 82     Fields:    Translation:AnimalsCells
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