Arun Prakash Budde, MD, PhD
Biography
| University of Rochester, Rochester, NY | Bachelors of Science/Arts | 06/1996 | Chemistry/History |
| New York University School of Medicine, New York, NY | MD/PhD | 06/2005 | Medicine/Immunology |
| Santa Clara Valley Medical Center, San Jose, CA | | 06/2006 | Internship in Internal Medicine |
| University of California San Francisco, San Francisco, CA | | 07/2009 | Anesthesiology |
| University of California San Francisco, San Francisco, CA | | 07/2011 | Post-doctoral Fellowship/Clinical Instructor |
| UCSF | 2019 | | Laboratory Safety Award |
Overview
Research
ORNG Applications
Bibliographic
Altmetrics Details
PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media.
(Note that publications are often cited in additional ways that are not shown here.)
Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication.
Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication.
Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.)
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Sequential Blood Collection from Inferior Vena Cava Followed by Portal Vein to Evaluate Gut Microbial Metabolites in Mice. J. Vis. Exp. 2024.
Doan, T. N. M., Maruyama, D., Tian, X., Prakash, A. View Publication.
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Regulation of Lung Immune Tone by the Gut-Lung Axis via Dietary Fiber, Gut Microbiota, and Short-Chain Fatty Acids. BioRxiv. 2023.
Maruyama D, Liao WI, Tian X, Bredon M, Knapp J, Tat C, Doan TNM, Chassaing B, Bhargava A, Sokol H, Prakash A. View Publication.
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A Mouse Model of Orotracheal Intubation and Ventilated Lung Ischemia Reperfusion Surgery. J. Vis. Exp. 2022.
Liao, W. I., Maruyama, D., Kianian, F., Tat, C., Tian, X., Hellman, J., Dodd-o, J. M., Prakash, A. View Publication.
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Lung immune tone via gut-lung axis: gut-derived LPS and short-chain fatty acids' immunometabolic regulation of lung IL-1β, FFAR2, and FFAR3 expression. Am J Physiol Lung Cell Mol Physiol. 2021 07 01; 321(1):L65-L78.
Liu Q, Tian X, Maruyama D, Arjomandi M, Prakash A. PMID: 33851870; PMCID: PMC8321849.
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PubMed Mentions:
43 Fields:
Translation:
HumansAnimals
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PubMed Mentions:
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A journey upstream: Fluctuating platelet-specific genes in cell-free plasma as proof-of-concept for using ribonucleic acid sequencing to improve understanding of postinjury platelet biology. J Trauma Acute Care Surg. 2020 06; 88(6):742-751.
Kornblith LZ, Bainton CMV, Fields AT, Matthay ZA, Magid NT, Nunez-Garcia B, Prakash A, Kurien PA, Callcut RA, Cohen MJ, Bainton RJ. PMID: 32195992; PMCID: PMC7571783.
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PubMed Mentions:
1 Fields:
Translation:
HumansCells
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Corrigendum: Elevated Gut Microbiome-Derived Propionate Levels Are Associated With Reduced Sterile Lung Inflammation and Bacterial Immunity in Mice. Front Microbiol. 2019; 10:518.
Tian X, Hellman J, Horswill AR, Crosby HA, Francis KP, Prakash A. PMID: 30972040; PMCID: PMC6443955.
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PubMed Mentions:
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Elevated Gut Microbiome-Derived Propionate Levels Are Associated With Reduced Sterile Lung Inflammation and Bacterial Immunity in Mice. Front Microbiol. 2019; 10:159.
Tian X, Hellman J, Horswill AR, Crosby HA, Francis KP, Prakash A. PMID: 30891007; PMCID: PMC6413706.
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PubMed Mentions:
35
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NLRP3 Inflammasome Mediates Dormant Neutrophil Recruitment following Sterile Lung Injury and Protects against Subsequent Bacterial Pneumonia in Mice. Front Immunol. 2017; 8:1337.
Tian X, Sun H, Casbon AJ, Lim E, Francis KP, Hellman J, Prakash A. PMID: 29163464; PMCID: PMC5671513.
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PubMed Mentions:
15 Fields:
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N-Arachidonoyl Dopamine Modulates Acute Systemic Inflammation via Nonhematopoietic TRPV1. J Immunol. 2017 08 15; 199(4):1465-1475.
Lawton SK, Xu F, Tran A, Wong E, Prakash A, Schumacher M, Hellman J, Wilhelmsen K. PMID: 28701511; PMCID: PMC5544930.
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PubMed Mentions:
15 Fields:
Translation:
Animals
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Lung Ischemia-Reperfusion is a Sterile Inflammatory Process Influenced by Commensal Microbiota in Mice. Shock. 2015 Sep; 44(3):272-9.
Prakash A, Sundar SV, Zhu YG, Tran A, Lee JW, Lowell C, Hellman J. PMID: 26196836; PMCID: PMC4537678.
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PubMed Mentions:
33 Fields:
Translation:
AnimalsCells
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Extracellular signal-regulated kinase 5 promotes acute cellular and systemic inflammation. Sci Signal. 2015 Aug 25; 8(391):ra86.
Wilhelmsen K, Xu F, Farrar K, Tran A, Khakpour S, Sundar S, Prakash A, Wang J, Gray NS, Hellman J. PMID: 26307013; PMCID: PMC5734625.
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PubMed Mentions:
22 Fields:
Translation:
HumansAnimalsCells
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Increased expression of neutrophil-related genes in patients with early sepsis-induced ARDS. Am J Physiol Lung Cell Mol Physiol. 2015 Jun 01; 308(11):L1102-13.
Kangelaris KN, Prakash A, Liu KD, Aouizerat B, Woodruff PG, Erle DJ, Rogers A, Seeley EJ, Chu J, Liu T, Osterberg-Deiss T, Zhuo H, Matthay MA, Calfee CS. PMID: 25795726; PMCID: PMC4451399.
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PubMed Mentions:
100 Fields:
Translation:
HumansCells
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Enhanced detection of myeloperoxidase activity in deep tissues through luminescent excitation of near-infrared nanoparticles. Nat Med. 2013 Apr; 19(4):500-5.
Zhang N, Francis KP, Prakash A, Ansaldi D. PMID: 23455711.
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PubMed Mentions:
36 Fields:
Translation:
Animals
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Alveolar macrophages and Toll-like receptor 4 mediate ventilated lung ischemia reperfusion injury in mice. Anesthesiology. 2012 Oct; 117(4):822-35.
Prakash A, Mesa KR, Wilhelmsen K, Xu F, Dodd-o JM, Hellman J. PMID: 22890118; PMCID: PMC3477877.
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PubMed Mentions:
30 Fields:
Translation:
HumansAnimalsCells
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Activation of endothelial TLR2 by bacterial lipoprotein upregulates proteins specific for the neutrophil response. Innate Immun. 2012 Aug; 18(4):602-16.
Wilhelmsen K, Mesa KR, Prakash A, Xu F, Hellman J. PMID: 22186927; PMCID: PMC3444510.
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PubMed Mentions:
29 Fields:
Translation:
HumansCells
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Bacterial lipoprotein TLR2 agonists broadly modulate endothelial function and coagulation pathways in vitro and in vivo. J Immunol. 2011 Jan 15; 186(2):1119-30.
Shin HS, Xu F, Bagchi A, Herrup E, Prakash A, Valentine C, Kulkarni H, Wilhelmsen K, Warren S, Hellman J. PMID: 21169547; PMCID: PMC3482611.
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PubMed Mentions:
42 Fields:
Translation:
HumansAnimalsCells
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Editorial: Pattern recognition receptors and factor B: "complement"ary pathways converge. J Leukoc Biol. 2010 Oct; 88(4):605-7.
Prakash A, Hellman J. PMID: 20884653.
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PubMed Mentions: Fields:
Translation:
HumansAnimalsCells
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Regulation of IRF7 through cell type-specific protein stability. Biochem Biophys Res Commun. 2006 Mar 31; 342(1):50-6.
Prakash A, Levy DE. PMID: 16472772; PMCID: PMC1647301.
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PubMed Mentions:
29 Fields:
Translation:
HumansAnimalsCells
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Tissue-specific positive feedback requirements for production of type I interferon following virus infection. J Biol Chem. 2005 May 13; 280(19):18651-7.
Prakash A, Smith E, Lee CK, Levy DE. PMID: 15767254; PMCID: PMC1167601.
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PubMed Mentions:
57 Fields:
Translation:
AnimalsCells
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Ringing the interferon alarm: differential regulation of gene expression at the interface between innate and adaptive immunity. Curr Opin Immunol. 2003 Feb; 15(1):52-8.
Levy DE, Marié I, Prakash A. PMID: 12495733.
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PubMed Mentions:
55 Fields:
Translation:
AnimalsCells
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Acetylation of interferon regulatory factor-7 by p300/CREB-binding protein (CBP)-associated factor (PCAF) impairs its DNA binding. J Biol Chem. 2002 Dec 20; 277(51):49417-21.
Caillaud A, Prakash A, Smith E, Masumi A, Hovanessian AG, Levy DE, Marié I. PMID: 12374802.
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PubMed Mentions:
33 Fields:
Translation:
HumansAnimalsCells
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Enhancement and diversification of IFN induction by IRF-7-mediated positive feedback. J Interferon Cytokine Res. 2002 Jan; 22(1):87-93.
Levy DE, Marié I, Smith E, Prakash A. PMID: 11846979.
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PubMed Mentions:
74 Fields:
Translation:
HumansAnimalsCells
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IRF3 and IRF7 phosphorylation in virus-infected cells does not require double-stranded RNA-dependent protein kinase R or Ikappa B kinase but is blocked by Vaccinia virus E3L protein. J Biol Chem. 2001 Mar 23; 276(12):8951-7.
Smith EJ, Marié I, Prakash A, García-Sastre A, Levy DE. PMID: 11124948.
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PubMed Mentions:
103 Fields:
Translation:
AnimalsCells
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Phosphorylation-induced dimerization of interferon regulatory factor 7 unmasks DNA binding and a bipartite transactivation domain. Mol Cell Biol. 2000 Dec; 20(23):8803-14.
Marié I, Smith E, Prakash A, Levy DE. PMID: 11073981; PMCID: PMC86519.
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PubMed Mentions:
59 Fields:
Translation:
AnimalsCells
This graph shows the total number of publications by year. To see the data as text,
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This graph shows the total number of publications by year. To return to the graph,
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| Year | Publications |
|---|
| 2000 | 2 |
| 2002 | 2 |
| 2003 | 1 |
| 2005 | 1 |
| 2006 | 1 |
| 2010 | 2 |
| 2011 | 1 |
| 2012 | 1 |
| 2013 | 1 |
| 2015 | 3 |
| 2017 | 2 |
| 2019 | 2 |
| 2020 | 2 |
| 2021 | 1 |
| 2022 | 1 |
| 2023 | 1 |
| 2024 | 1 |
This graph shows the number and percent of publications by field.
Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications.
Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written.
To see the data as text,
click here.
This graph shows the number and percent of publications by field.
Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications.
Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written.
To see the data as text,
click here.
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