Jonathan Pan, PhD, MD

Title(s)Associate Professor, Anesthesia
SchoolSchool of Medicine
Address1001 Potrero Ave, #165
San Francisco CA 94110
ORCID ORCID Icon0000-0001-5814-3707 Additional info
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    Collapse Biography 
    Collapse Education and Training
    University of California, San FranciscoNIH T32 FellowAnesthesia and Neurotrauma
    University of Pennsylvania, PhiladelphiaResidentAnesthesiology and Critical Care
    Rutgers University, New JerseyPhD.Neuroscience
    Fudan University Medical Center MD.Medicine
    Collapse Awards and Honors
    Anesthesia, UCSF2014  - 2016John Severinghaus Assistant Professor

    Collapse Overview 

    Collapse Research 
    Collapse Research Activities and Funding
    Role of Activating Transcription Factor 3 in Spinal Cord Injury
    Department of Defense Sep 1, 2022 - Aug 31, 2025
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. ATF3 is a neuron-specific biomarker for spinal cord injury and ischaemic stroke. Clin Transl Med. 2024 Apr; 14(4):e1650. Pan JZ, Wang Z, Sun W, Pan P, Li W, Sun Y, Chen S, Lin A, Tan W, He L, Greene J, Yao V, An L, Liang R, Li Q, Yu J, Zhang L, Kyritsis N, Fernandez XD, Moncivais S, Mendoza E, Fung P, Wang G, Niu X, Du Q, Xiao Z, Chang Y, Lv P, Huie JR, Torres-Espin A, Ferguson AR, Hemmerle DD, Talbott JF, Weinstein PR, Pascual LU, Singh V, DiGiorgio AM, Saigal R, Whetstone WD, Manley GT, Dhall SS, Bresnahan JC, Maze M, Jiang X, Singhal NS, Beattie MS, Su H, Guan Z. PMID: 38649772; PMCID: PMC11035380.
      View in: PubMed   Mentions:
    2. Correction: Expert-augmented automated machine learning optimizes hemodynamic predictors of spinal cord injury outcome. PLoS One. 2023; 18(11):e0294081. Chou A, Torres-Espin A, Kyritsis N, Huie JR, Khatry S, Funk J, Hay J, Lofgreen A, Shah R, McCann C, Pascual LU, Amorim E, Weinstein PR, Manley GT, Dhall SS, Pan JZ, Bresnahan JC, Beattie MS, Whetstone WD, Ferguson AR, TRACK-SCI Investigators. PMID: 37917637; PMCID: PMC10621810.
      View in: PubMed   Mentions:    Fields:    
    3. 188 American Spinal Injury Association (ASIA) Impairment Scale (AIS) Conversion Underestimates Neurological Recovery Following Traumatic Spinal Cord Injury. Neurosurgery. 2023 Apr 1; 69(Supplement_1):29-29. Choy CW, Kyritsis KN, Fernandez FX, Ferguson FA, Hemmerle HD, Pascual PL, Singh SV, Talbott TJ, Pan PJ, Torres TA, Whetstone WW, Huie HJ, Fond FK, Keller KA, Bresnahan BJ, Beattie BM, DiGiorgio DA, Dhall DS, Saigal SR. .
      View in: Publisher Site   Mentions:
    4. Hypotension requiring vasopressor treatment and increased cardiac complications in elderly spinal cord injury patients: a prospective TRACK-SCI registry study. J Neurosurg Spine. 2023 Mar 17; 1-9. Agarwal N, Blitstein J, Lui A, Torres-Espin A, Vasnarungruengkul C, Burke J, Mummaneni PV, Dhall SS, Weinstein PR, Duong-Fernandez X, Chou A, Pan J, Singh V, Ferguson AR, Hemmerle DD, Kyritsis N, Talbott JF, Whetstone WD, Bresnahan JC, Beattie MS, Manley GT, DiGiorgio A. PMID: 36933260.
      View in: PubMed   Mentions:    Fields:    
    5. Editorial: Perinatal hypoxic-ischemic brain injury: Mechanisms, pathogenesis, and potential therapeutic strategies. Front Cell Neurosci. 2022 Dec 13;16:1086692. PMID: 36582212. 2022. Xiaodi Chen, Shadi Nawaf Malaeb, Jonathan Pan, Laishuan Wang, Joseph Scafidi. View Publication.
    6. Expert-augmented automated machine learning optimizes hemodynamic predictors of spinal cord injury outcome. PLoS One. 2022; 17(4):e0265254. Chou A, Torres-Espin A, Kyritsis N, Huie JR, Khatry S, Funk J, Hay J, Lofgreen A, Shah R, McCann C, Pascual LU, Amorim E, Weinstein PR, Manley GT, Dhall SS, Pan JZ, Bresnahan JC, Beattie MS, Whetstone WD, Ferguson AR, TRACK-SCI Investigators. PMID: 35390006; PMCID: PMC8989303.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    7. Decision tree-based machine learning analysis of intraoperative vasopressor use to optimize neurological improvement in acute spinal cord injury. Neurosurg Focus. 2022 04; 52(4):E9. Agarwal N, Aabedi AA, Torres-Espin A, Chou A, Wozny TA, Mummaneni PV, Burke JF, Ferguson AR, Kyritsis N, Dhall SS, Weinstein PR, Duong-Fernandez X, Pan J, Singh V, Hemmerle DD, Talbott JF, Whetstone WD, Bresnahan JC, Manley GT, Beattie MS, DiGiorgio AM. PMID: 35364586.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    8. Topological network analysis of patient similarity for precision management of acute blood pressure in spinal cord injury. Elife. 2021 11 16; 10. Torres-Espín A, Haefeli J, Ehsanian R, Torres D, Almeida CA, Huie JR, Chou A, Morozov D, Sanderson N, Dirlikov B, Suen CG, Nielson JL, Kyritsis N, Hemmerle DD, Talbott JF, Manley GT, Dhall SS, Whetstone WD, Bresnahan JC, Beattie MS, McKenna SL, Pan JZ, Ferguson AR, TRACK-SCI Investigators. PMID: 34783309; PMCID: PMC8639149.
      View in: PubMed   Mentions: 12     Fields:    Translation:Humans
    9. Diagnostic blood RNA profiles for human acute spinal cord injury. J Exp Med. 2021 03 01; 218(3). Kyritsis N, Torres-Espín A, Schupp PG, Huie JR, Chou A, Duong-Fernandez X, Thomas LH, Tsolinas RE, Hemmerle DD, Pascual LU, Singh V, Pan JZ, Talbott JF, Whetstone WD, Burke JF, DiGiorgio AM, Weinstein PR, Manley GT, Dhall SS, Ferguson AR, Oldham MC, Bresnahan JC, Beattie MS. PMID: 33512429; PMCID: PMC7852457.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansCells
    10. Injury volume extracted from MRI predicts neurologic outcome in acute spinal cord injury: A prospective TRACK-SCI pilot study. J Clin Neurosci. 2020 Dec; 82(Pt B):231-236. Mummaneni N, Burke JF, DiGiorgio AM, Thomas LH, Duong-Fernandez X, Harris M, Pascual LU, Ferguson AR, Russell Huie J, Pan JZ, Hemmerle DD, Singh V, Torres-Espin A, Omondi C, Kyritsis N, Weinstein PR, Whetstone WD, Manley GT, Bresnahan JC, Beattie MS, Cohen-Adad J, Dhall SS, Talbott JF. PMID: 33248950.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    11. Dexmedetomidine Exerts an Anti-inflammatory Effect via α2 Adrenoceptors to Prevent Lipopolysaccharide-induced Cognitive Decline in Mice. Anesthesiology. 2020 08; 133(2):393-407. Li R, Lai IK, Pan JZ, Zhang P, Maze M. PMID: 32482998.
      View in: PubMed   Mentions: 19     Fields:    Translation:Animals
    12. Transforming Research and Clinical Knowledge in Spinal Cord Injury (TRACK-SCI): an overview of initial enrollment and demographics. Neurosurg Focus. 2020 05 01; 48(5):E6. Tsolinas RE, Burke JF, DiGiorgio AM, Thomas LH, Duong-Fernandez X, Harris MH, Yue JK, Winkler EA, Suen CG, Pascual LU, Ferguson AR, Huie JR, Pan JZ, Hemmerle DD, Singh V, Torres-Espin A, Omondi C, Kyritsis N, Haefeli J, Weinstein PR, de Almeida Neto CA, Kuo YH, Taggard D, Talbott JF, Whetstone WD, Manley GT, Bresnahan JC, Beattie MS, Dhall SS. PMID: 32357323.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    13. Dexmedetomidine modulates neuroinflammation and improves outcome via alpha2-adrenergic receptor signaling after rat spinal cord injury. Br J Anaesth. 2019 12; 123(6):827-838. Gao J, Sun Z, Xiao Z, Du Q, Niu X, Wang G, Chang YW, Sun Y, Sun W, Lin A, Bresnahan JC, Maze M, Beattie MS, Pan JZ. PMID: 31623841; PMCID: PMC6883489.
      View in: PubMed   Mentions: 21     Fields:    Translation:AnimalsCells
    14. Traumatic Brain Injury: Risk Assessment and Perioperative Management. . 2019 Sep 28; 67-75. Pan PJ, Meng ML. .
      View in: Publisher Site   Mentions:
    15. Clinical Implementation of Novel Spinal Cord Perfusion Pressure Protocol in Acute Traumatic Spinal Cord Injury at U.S. Level I Trauma Center: TRACK-SCI Study. World Neurosurg. 2020 Jan; 133:e391-e396. Yue JK, Hemmerle DD, Winkler EA, Thomas LH, Fernandez XD, Kyritsis N, Pan JZ, Pascual LU, Singh V, Weinstein PR, Talbott JF, Huie JR, Ferguson AR, Whetstone WD, Manley GT, Beattie MS, Bresnahan JC, Mummaneni PV, Dhall SS. PMID: 31526882.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    16. Ultra-Early (<12 Hours) Surgery Correlates With Higher Rate of American Spinal Injury Association Impairment Scale Conversion After Cervical Spinal Cord Injury. Neurosurgery. 2019 08 01; 85(2):199-203. Burke JF, Yue JK, Ngwenya LB, Winkler EA, Talbott JF, Pan JZ, Ferguson AR, Beattie MS, Bresnahan JC, Haefeli J, Whetstone WD, Suen CG, Huang MC, Manley GT, Tarapore PE, Dhall SS. PMID: 30496474.
      View in: PubMed   Mentions: 21     Fields:    Translation:Humans
    17. In Reply: Ultra-Early (<12 Hours) Surgery Correlates With Higher Rate of American Spinal Injury Association Impairment Scale Conversion After Cervical Spinal Cord Injury. Neurosurgery. 2019 08 01; 85(2):E401-E402. Burke JF, Yue JK, Ngwenya LB, Winkler EA, Talbott JF, Pan JZ, Ferguson AR, Beattie MS, Bresnahan JC, Haefeli J, Whetstone WD, Suen CG, Huang MC, Manley GT, Tarapore PE, Dhall SS. PMID: 31173137.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    18. Motor Evoked Potentials Correlate With Magnetic Resonance Imaging and Early Recovery After Acute Spinal Cord Injury. Neurosurgery. 2018 06 01; 82(6):870-876. Dhall SS, Haefeli J, Talbott JF, Ferguson AR, Readdy WJ, Bresnahan JC, Beattie MS, Pan JZ, Manley GT, Whetstone WD. PMID: 28973360.
      View in: PubMed   Mentions: 14     Fields:    Translation:Humans
    19. Genomics and Proteomic Techniques. Methods Enzymol. 2018; 603:221-235. Pan JZ. PMID: 29673528.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    20. Between a ROCK and an IR Place. Anesth Analg. 2018 03; 126(3):750-751. Pan JZ, Eckenhoff RG. PMID: 29461324.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    21. Failure of Mean Arterial Pressure Goals to Improve Outcomes Following Penetrating Spinal Cord Injury. Neurosurgery. 2016 Nov; 79(5):708-714. Readdy WJ, Saigal R, Whetstone WD, Mefford AN, Ferguson AR, Talbott JF, Inoue T, Bresnahan JC, Beattie MS, Pan J, Manley GT, Dhall SS. PMID: 27759678.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    22. Anesthesia for Electroconvulsive Therapy. . 2016 Sep 30; 249-259. Jackman JN, Pan PJ. .
      View in: Publisher Site   Mentions:
    23. Higher Mean Arterial Pressure Values Correlate with Neurologic Improvement in Patients with Initially Complete Spinal Cord Injuries. World Neurosurg. 2016 Dec; 96:72-79. Catapano JS, John Hawryluk GW, Whetstone W, Saigal R, Ferguson A, Talbott J, Bresnahan J, Dhall S, Pan J, Beattie M, Manley G. PMID: 27565460; PMCID: PMC5127746.
      View in: PubMed   Mentions: 17     Fields:    Translation:Humans
    24. 182 Ultra-Early (<12 Hours) Decompression Improves Recovery After Spinal Cord Injury Compared to Early (12-24 Hours) Decompression. Neurosurgery. 2016 Aug 1; 63:172. Burke BJ, Yue YJ, Ngwenya NL, Winkler WE, Talbott TJ, Pan PJ, Ferguson FA, Beattie BM, Bresnahan BJ, Haefeli HJ, Whetstone WW, Suen SC, Huang HM, Manley MG, Tarapore TP, Dhall DS. .
      View in: Publisher Site   Mentions:
    25. 182 Ultra-Early (<12 Hours) Decompression Improves Recovery After Spinal Cord Injury Compared to Early (12-24 Hours) Decompression. Neurosurgery. 2016 Aug; 63 Suppl 1:172. Burke JF, Yue JK, Ngwenya LB, Winkler EA, Talbott J, Pan J, Ferguson A, Beattie M, Bresnahan J, Haefeli J, Whetstone W, Suen C, Huang MC, Manley GT, Tarapore PE, Dhall SS. PMID: 27399461.
      View in: PubMed   Mentions:
    26. Failure of Mean Arterial Pressure Goals to Improve Outcomes Following Penetrating Spinal Cord Injury. Neurosurgery. 2016 May 03. Readdy WJ, Saigal R, Whetstone WD, Mefford A, Ferguson AR, Talbott JF, Inoue T, Bresnahan JC, Beattie MS, Pan J, Manley GT, Dhall SS. PMID: 27145343.
      View in: PubMed   Mentions:
    27. Changes in the Bispectral Index in Response to Loss of Consciousness and No Somatic Movement to Nociceptive Stimuli in Elderly Patients. Chin Med J (Engl). 2016 Feb 20; 129(4):410-6. Yang N, Yue Y, Pan JZ, Zuo MZ, Shi Y, Zhou SZ, Peng WP, Gao JD. PMID: 26879014; PMCID: PMC4800841.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    28. Multidimensional Analysis of Magnetic Resonance Imaging Predicts Early Impairment in Thoracic and Thoracolumbar Spinal Cord Injury. J Neurotrauma. 2016 05 15; 33(10):954-62. Mabray MC, Talbott JF, Whetstone WD, Dhall SS, Phillips DB, Pan JZ, Manley GT, Bresnahan JC, Beattie MS, Haefeli J, Ferguson AR. PMID: 26414451; PMCID: PMC4876497.
      View in: PubMed   Mentions: 10     Fields:    Translation:Humans
    29. Mean Arterial Blood Pressure Correlates with Neurological Recovery after Human Spinal Cord Injury: Analysis of High Frequency Physiologic Data. J Neurotrauma. 2015 Dec 15; 32(24):1958-67. Hawryluk G, Whetstone W, Saigal R, Ferguson A, Talbott J, Bresnahan J, Dhall S, Pan J, Beattie M, Manley G. PMID: 25669633; PMCID: PMC4677564.
      View in: PubMed   Mentions: 71     Fields:    Translation:Humans
    30. Complications and outcomes of vasopressor usage in acute traumatic central cord syndrome. J Neurosurg Spine. 2015 Nov; 23(5):574-580. Readdy WJ, Whetstone WD, Ferguson AR, Talbott JF, Inoue T, Saigal R, Bresnahan JC, Beattie MS, Pan JZ, Manley GT, Dhall SS. PMID: 26230417.
      View in: PubMed   Mentions: 15     Fields:    
    31. The Brain and Spinal Injury Center score: a novel, simple, and reproducible method for assessing the severity of acute cervical spinal cord injury with axial T2-weighted MRI findings. J Neurosurg Spine. 2015 Oct; 23(4):495-504. Talbott JF, Whetstone WD, Readdy WJ, Ferguson AR, Bresnahan JC, Saigal R, Hawryluk GW, Beattie MS, Mabray MC, Pan JZ, Manley GT, Dhall SS. PMID: 26161519.
      View in: PubMed   Mentions: 48     Fields:    Translation:Humans
    32. Differential general anesthetic effects on microglial cytokine expression. PLoS One. 2013; 8(1):e52887. Ye X, Lian Q, Eckenhoff MF, Eckenhoff RG, Pan JZ. PMID: 23382826; PMCID: PMC3561404.
      View in: PubMed   Mentions: 39     Fields:    Translation:HumansCells
    33. Inhaled anesthetics elicit region-specific changes in protein expression in mammalian brain. Proteomics. 2008 Jul; 8(14):2983-92. Pan JZ, Xi J, Eckenhoff MF, Eckenhoff RG. PMID: 18655074.
      View in: PubMed   Mentions: 11     Fields:    Translation:AnimalsCells
    34. Limitations of microarray studies. Anesth Analg. 2007 May; 104(5):1300-1; author reply 1301-2. Pan JZ, Eckenhoff RG, Eckenhoff MF. PMID: 17456700.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    35. Halothane binding proteome in human brain cortex. J Proteome Res. 2007 Feb; 6(2):582-92. Pan JZ, Xi J, Tobias JW, Eckenhoff MF, Eckenhoff RG. PMID: 17269715.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansCells
    36. Rat brain DNA transcript profile of halothane and isoflurane exposure. Pharmacogenet Genomics. 2006 Mar; 16(3):171-82. Pan JZ, Wei H, Hecker JG, Tobias JW, Eckenhoff RG, Eckenhoff MF. PMID: 16495776.
      View in: PubMed   Mentions: 6     Fields:    Translation:Animals
    37. Screening anti-inflammatory compounds in injured spinal cord with microarrays: a comparison of bioinformatics analysis approaches. Physiol Genomics. 2004 Apr 13; 17(2):201-14. Pan JZ, Jörnsten R, Hart RP. PMID: 14970362.
      View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells
    38. Cytokine activity contributes to induction of inflammatory cytokine mRNAs in spinal cord following contusion. J Neurosci Res. 2002 May 01; 68(3):315-22. Pan JZ, Ni L, Sodhi A, Aguanno A, Young W, Hart RP. PMID: 12111861.
      View in: PubMed   Mentions: 51     Fields:    Translation:AnimalsCells
    39. Pathological CNS autoimmune disease triggered by traumatic spinal cord injury: implications for autoimmune vaccine therapy. J Neurosci. 2002 Apr 01; 22(7):2690-700. Jones TB, Basso DM, Sodhi A, Pan JZ, Hart RP, MacCallum RC, Lee S, Whitacre CC, Popovich PG. PMID: 11923434; PMCID: PMC6758306.
      View in: PubMed   Mentions: 63     Fields:    Translation:AnimalsCells
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