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Current proteomics methods applicable to dissecting the DNA damage response. NAR Cancer. 2023 Jun; 5(2):zcad020.
Muralidharan M, Krogan NJ, Bouhaddou M, Kim M. PMID: 37213254; PMCID: PMC10198729.
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PubMed Mentions:
1
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Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins. Proc Natl Acad Sci U S A. 2022 08 16; 119(33):e2207200119.
Zhao J, Makhija S, Zhou C, Zhang H, Wang Y, Muralidharan M, Huang B, Cheng Y. PMID: 35858375; PMCID: PMC9388094.
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PubMed Mentions:
5 Fields:
Translation:
HumansCells
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Proteomic Approaches to Study SARS-CoV-2 Biology and COVID-19 Pathology. J Proteome Res. 2021 02 05; 20(2):1133-1152.
Haas P, Muralidharan M, Krogan NJ, Kaake RM, Hüttenhain R. PMID: 33464917; PMCID: PMC7839417.
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PubMed Mentions:
14 Fields:
Translation:
HumansCellsPHPublic Health
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The Global Phosphorylation Landscape of SARS-CoV-2 Infection. Cell. 2020 08 06; 182(3):685-712.e19.
Bouhaddou M, Memon D, Meyer B, White KM, Rezelj VV, Correa Marrero M, Polacco BJ, Melnyk JE, Ulferts S, Kaake RM, Batra J, Richards AL, Stevenson E, Gordon DE, Rojc A, Obernier K, Fabius JM, Soucheray M, Miorin L, Moreno E, Koh C, Tran QD, Hardy A, Robinot R, Vallet T, Nilsson-Payant BE, Hernandez-Armenta C, Dunham A, Weigang S, Knerr J, Modak M, Quintero D, Zhou Y, Dugourd A, Valdeolivas A, Patil T, Li Q, Hüttenhain R, Cakir M, Muralidharan M, Kim M, Jang G, Tutuncuoglu B, Hiatt J, Guo JZ, Xu J, Bouhaddou S, Mathy CJP, Gaulton A, Manners EJ, Félix E, Shi Y, Goff M, Lim JK, McBride T, O'Neal MC, Cai Y, Chang JCJ, Broadhurst DJ, Klippsten S, De Wit E, Leach AR, Kortemme T, Shoichet B, Ott M, Saez-Rodriguez J, tenOever BR, Mullins RD, Fischer ER, Kochs G, Grosse R, García-Sastre A, Vignuzzi M, Johnson JR, Shokat KM, Swaney DL, Beltrao P, Krogan NJ. PMID: 32645325; PMCID: PMC7321036.
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Structural analysis of glycated human hemoglobin using native mass spectrometry. FEBS J. 2020 03; 287(6):1247-1254.
Muralidharan M, Bhat V, Mandal AK. PMID: 31599087.
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PubMed Mentions:
3 Fields:
Translation:
HumansCells
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Structural analysis of glutathionyl hemoglobin using native mass spectrometry. J Struct Biol. 2019 12 01; 208(3):107386.
Muralidharan M, Mitra A, Maity D, Pal D, Mandal AK. PMID: 31518635.
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PubMed Mentions:
5 Fields:
Translation:
HumansCells
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Glycation profile of minor abundant erythrocyte proteome across varying glycemic index in diabetes mellitus. Anal Biochem. 2019 05 15; 573:37-43.
Muralidharan M, Bhat V, Bindu YS, Mandal AK. PMID: 30831097.
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PubMed Mentions:
5 Fields:
Translation:
HumansCellsPHPublic Health
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Characterization of residue-specific glutathionylation of CSF proteins in multiple sclerosis - A MS-based approach. Anal Biochem. 2019 01 01; 564-565:108-115.
Srivastava D, Kukkuta Sarma GR, Dsouza DS, Muralidharan M, Srinivasan K, Mandal AK. PMID: 30367882.
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PubMed Mentions:
3 Fields:
Translation:
HumansCells
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Conformational heterogeneity of tau: Implication on intrinsic disorder, acid stability and fibrillation in Alzheimer's disease. Biophys Chem. 2018 10; 241:27-37.
Jebarupa B, Muralidharan M, Arun A, Mandal AK, Mitra G. PMID: 30081240.
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PubMed Mentions:
8 Fields:
Translation:
HumansCells
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Effect of altered solution conditions on tau conformational dynamics: Plausible implication on order propensity and aggregation. Biochim Biophys Acta Proteins Proteom. 2018 May - Jun; 1866(5-6):668-679.
Jebarupa B, Muralidharan M, Srinivasu BY, Mandal AK, Mitra G. PMID: 29630971.
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PubMed Mentions:
3 Fields:
Translation:
HumansCells
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Analysis of the Quaternary Structure of Hemoglobin Beckman Variant and Molecular Interpretation of Its Functional Abnormality: A Mass-Spectrometry-Based Approach. Chembiochem. 2018 03 16; 19(6):633-640.
Muralidharan M, Das R, Bhat V, Mandal AK. PMID: 29316124.
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PubMed Mentions:
2 Fields:
Translation:
HumansCells
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Assessment of Cysteine Reactivity of Human Hemoglobin at Its Residue Level: A Mass Spectrometry-Based Approach. Hemoglobin. 2017 Jul - Nov; 41(4-6):300-305.
Mitra A, Muralidharan M, Srivastava D, Das R, Bhat V, Mandal AK. PMID: 29210301.
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PubMed Mentions:
3 Fields:
Translation:
Humans
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Interaction of p-benzoquinone with hemoglobin in smoker's blood causes alteration of structure and loss of oxygen binding capacity. Toxicol Rep. 2016; 3:295-305.
Ghosh A, Banerjee S, Mitra A, Muralidharan M, Roy B, Banerjee R, Mandal AK, Chatterjee IB. PMID: 28959550; PMCID: PMC5615826.
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PubMed Mentions:
5
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Protein Structure-Function Correlation in Living Human Red Blood Cells Probed by Isotope Exchange-based Mass Spectrometry. Anal Chem. 2015 Dec 01; 87(23):11812-8.
Narayanan S, Mitra G, Muralidharan M, Mathew B, Mandal AK. PMID: 26531244.
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PubMed Mentions:
3 Fields:
Translation:
HumansCells
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Mass spectrometry based characterization of Hb Beckman variant in a falsely elevated HbA(1c) sample. Anal Biochem. 2015 Nov 15; 489:53-8.
Das R, Muralidharan M, Mitra G, Bhat V, Mathew B, Pal D, Ross C, Mandal AK. PMID: 26209877.
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PubMed Mentions: Fields:
Translation:
HumansCells
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Glutathionylation induced structural changes in oxy human hemoglobin analyzed by backbone amide hydrogen/deuterium exchange and MALDI-mass spectrometry. Bioconjug Chem. 2012 Dec 19; 23(12):2344-53.
Mitra G, Muralidharan M, Narayanan S, Pinto J, Srinivasan K, Mandal AK. PMID: 23153198.
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PubMed Mentions:
7 Fields:
Translation:
HumansCells
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Structural perturbation of human hemoglobin on glutathionylation probed by hydrogen-deuterium exchange and MALDI mass spectrometry. Bioconjug Chem. 2011 Apr 20; 22(4):785-93.
Mitra G, Muralidharan M, Pinto J, Srinivasan K, Mandal AK. PMID: 21384878.
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PubMed Mentions:
3 Fields:
Translation:
HumansCells