Krishna Choudhary, PhD

Title(s)Postdoctoral Scholar, Diabetes Center
SchoolSchool of Medicine
ORCID ORCID Icon0000-0002-7966-1527 Additional info
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Phenotypic differences between the Alzheimer's disease-related hAPP-J20 model and heterozygous Zbtb20 knockout mice. eNeuro. 2021 Apr 08. Gulbranson DR, Ho K, Yu GQ, Yu X, Das M, Shao E, Kim D, Zhang WJ, Choudhary K, Thomas R, Mucke L. PMID: 33833046.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    2. Urn models for stochastic gene expression yield intuitive insights into the probability distributions of single-cell mRNA and protein counts. Phys Biol. 2020 Sep 28; 17(6):066001. Choudhary K, Narang A. PMID: 32650327.
      View in: PubMed   Mentions: 1     Fields:    
    3. Stability and nuclear localization of yeast telomerase depend on protein components of RNase P/MRP. Nat Commun. 2020 05 01; 11(1):2173. Garcia PD, Leach RW, Wadsworth GM, Choudhary K, Li H, Aviran S, Kim HD, Zakian VA. PMID: 32358529.
      View in: PubMed   Mentions: 3     Fields:    Translation:AnimalsCells
    4. Analytical Expressions and Physics for Single-Cell mRNA Distributions of the lac Operon of E. coli. Biophys J. 2019 08 06; 117(3):572-586. Choudhary K, Narang A. PMID: 31331635.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    5. Genome-Wide Discovery of DEAD-Box RNA Helicase Targets Reveals RNA Structural Remodeling in Transcription Termination. Genetics. 2019 05; 212(1):153-174. Lai YH, Choudhary K, Cloutier SC, Xing Z, Aviran S, Tran EJ. PMID: 30902808.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    6. dStruct: identifying differentially reactive regions from RNA structurome profiling data. Genome Biol. 2019 02 21; 20(1):40. Choudhary K, Lai YH, Tran EJ, Aviran S. PMID: 30791935.
      View in: PubMed   Mentions: 4     Fields:    Translation:Cells
    7. Probing of RNA structures in a positive sense RNA virus reveals selection pressures for structural elements. Nucleic Acids Res. 2018 03 16; 46(5):2573-2584. Watters KE, Choudhary K, Aviran S, Lucks JB, Perry KL, Thompson JR. PMID: 29294088.
      View in: PubMed   Mentions: 8     Fields:    Translation:Cells
    8. Comparative and integrative analysis of RNA structural profiling data: current practices and emerging questions. Quant Biol. 2017 Mar; 5(1):3-24. Choudhary K, Deng F, Aviran S. PMID: 28717530.
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    9. SEQualyzer: interactive tool for quality control and exploratory analysis of high-throughput RNA structural profiling data. Bioinformatics. 2017 02 01; 33(3):441-443. Choudhary K, Ruan L, Deng F, Shih N, Aviran S. PMID: 28172632.
      View in: PubMed   Mentions: 4     Fields:    
    10. Metrics for rapid quality control in RNA structure probing experiments. Bioinformatics. 2016 12 01; 32(23):3575-3583. Choudhary K, Shih NP, Deng F, Ledda M, Li B, Aviran S. PMID: 27497441.
      View in: PubMed   Mentions: 9     Fields:    
    11. Protein distributions from a stochastic model of the lac operon of E. coli with DNA looping: analytical solution and comparison with experiments. PLoS One. 2014; 9(7):e102580. Choudhary K, Oehler S, Narang A. PMID: 25055040.
      View in: PubMed   Mentions: 3     Fields:    Translation:Cells
    12. Re-programming DNA-binding specificity in zinc finger proteins for targeting unique address in a genome. Syst Synth Biol. 2010 Dec; 4(4):323-9. Grover A, Pande A, Choudhary K, Gupta K, Sundar D. PMID: 22132059.
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