Benoit Bruneau, PhD

Title(s)Professor, Pediatrics
SchoolSchool of Medicine
Address550 16th Street, #5843
San Francisco CA 94158
Phone415-734-2708
ORCID ORCID Icon0000-0002-0804-7597 Additional info
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    Collapse Overview 
    Collapse Overview
    The main focus of our lab is to understand how a heart becomes a heart: what cell lineage decisions take place to direct cardiac differentiation, and what morphogenetic and patterning processes occur to assemble all of the heart's components into a functional organ. We are primarily interested in regulation of these processes by transcriptional regulatory mechanisms that include DNA-binding transcription factors, chromatin remodeling complexes, and histone modifications. We have used this knowledge to understand disease mechanisms, but also to devise strategies for cardiac regeneration.

    Why study heart development? We believe that primary defects in patterning in early heart development are at the root of congenital heart defects, which affect approximately 1% of live-born children, and we want to understand how these defects occur, to perhaps be able to uncover new and improved diagnostic or even therapeutic options. Also, by understanding how cardiac lineage specification occurs, we can better design stem cell-based interventions of cardiac repair, based on the knowledge of what drives an uncommitted cell towards a specific cardiac fate. We have recently focused our efforts on cardiac chromatin remodeling and modification factors, enzymes that unwind DNA or modify histones to turn genes on or off. We are particularly interested in how these factors control cardiac cell lineage decisions. These chromatin remodeling factors may also be key to pushing a stem cell into becoming a heart cell, perhaps opening up new avenues for cardiac regenerative medicine.

    Collapse Research 
    Collapse Research Activities and Funding
    Gene regulatory networks for heart development
    NIH R01HL155906Jan 1, 2021 - Dec 31, 2024
    Role: Principal Investigator
    Genetic determinants of 4D genome folding in human cardiac development
    NIH U01HL157989Sep 21, 2020 - Aug 31, 2025
    Role: Principal Investigator
    Early Cardiac Progenitors
    NIH R01HL114948Jul 1, 2013 - Mar 31, 2025
    Role: Principal Investigator
    The Epigenetic Landscape of Heart Development
    NIH UM1HL098179Sep 30, 2009 - Jul 31, 2021
    Role: Principal Investigator
    Induced Pluripotent Stem Cells in the Understanding and Treatment of Heart Diseas
    NIH U01HL100406Sep 30, 2009 - Oct 31, 2016
    Role: Co-Principal Investigator
    The Epigenetic Landscape of Heart Development
    NIH U01HL098179Sep 30, 2009 - Aug 31, 2015
    Role: Principal Investigator
    Iroquois Homeobox Transcription Factors in Heart Development and Physiology
    NIH R01HL093414Jul 1, 2009 - Aug 30, 2011
    Role: Principal Investigator
    Induced pluripotent stem cells in the understanding and treatment of heart diseas
    NIH R03HL096254Dec 1, 2008 - May 31, 2009
    Role: Co-Principal Investigator
    Chromatin remodeling complexes in heart development
    NIH R01HL085860Sep 1, 2006 - Jun 30, 2011
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. CDX2 dose-dependently influences the gene regulatory network underlying human extraembryonic mesoderm development. Biol Open. 2024 Mar 07. Bulger EA, McDevitt TC, Bruneau BG. PMID: 38451093.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    2. TBXT dose sensitivity and the decoupling of nascent mesoderm specification from EMT progression in 2D human gastruloids. Development. 2024 Feb 26. Bulger EA, Muncie-Vasic I, Libby ARG, McDevitt TC, Bruneau BG. PMID: 38411343.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    3. A TBX5-dependent compartment boundary patterns the cardiac interventricular septum. bioRxiv. 2024 Feb 05. Kathiriya IS, Dominguez MH, Rao KS, Muncie-Vasic JM, Patrick Devine W, Hu KM, Hota SK, Garay BI, Quintero D, Goyal P, Matthews MN, Thomas R, Sukonnik T, Miguel-Perez D, Winchester S, Brower EF, Forjaz A, Wu PH, Wirtz D, Kiemen AL, Bruneau BG. PMID: 38370632; PMCID: PMC10871243.
      View in: PubMed   Mentions:
    4. CDX2 dose-dependently influences the gene regulatory network underlying human extraembryonic mesoderm development. bioRxiv. 2024 Jan 26. Bulger EA, McDevitt TC, Bruneau BG. PMID: 38328098; PMCID: PMC10849648.
      View in: PubMed   Mentions:
    5. TBXT dose sensitivity and the decoupling of nascent mesoderm specification from EMT progression in 2D human gastruloids. bioRxiv. 2023 Nov 09. Bulger EA, Muncie-Vasic I, Libby ARG, McDevitt TC, Bruneau BG. PMID: 37986746; PMCID: PMC10659276.
      View in: PubMed   Mentions:
    6. Spatial and temporal organization of the genome: Current state and future aims of the 4D nucleome project. Mol Cell. 2023 08 03; 83(15):2624-2640. Dekker J, Alber F, Aufmkolk S, Beliveau BJ, Bruneau BG, Belmont AS, Bintu L, Boettiger A, Calandrelli R, Disteche CM, Gilbert DM, Gregor T, Hansen AS, Huang B, Huangfu D, Kalhor R, Leslie CS, Li W, Li Y, Ma J, Noble WS, Park PJ, Phillips-Cremins JE, Pollard KS, Rafelski SM, Ren B, Ruan Y, Shav-Tal Y, Shen Y, Shendure J, Shu X, Strambio-De-Castillia C, Vertii A, Zhang H, Zhong S. PMID: 37419111; PMCID: PMC10528254.
      View in: PubMed   Mentions: 5     Fields:    Translation:Cells
    7. A Mesp1-dependent developmental breakpoint in transcriptional and epigenomic specification of early cardiac precursors. Development. 2023 05 01; 150(9). Krup AL, Winchester SAB, Ranade SS, Agrawal A, Devine WP, Sinha T, Choudhary K, Dominguez MH, Thomas R, Black BL, Srivastava D, Bruneau BG. PMID: 36994838; PMCID: PMC10259516.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    8. Graded mesoderm assembly governs cell fate and morphogenesis of the early mammalian heart. Cell. 2023 02 02; 186(3):479-496.e23. Dominguez MH, Krup AL, Muncie JM, Bruneau BG. PMID: 36736300; PMCID: PMC10091855.
      View in: PubMed   Mentions: 7     Fields:    Translation:Animals
    9. Smarcd3 is an epigenetic modulator of the metabolic landscape in pancreatic ductal adenocarcinoma. Nat Commun. 2023 01 18; 14(1):292. Ferguson LP, Gatchalian J, McDermott ML, Nakamura M, Chambers K, Rajbhandari N, Lytle NK, Rosenthal SB, Hamilton M, Albini S, Wartenberg M, Zlobec I, Galván JA, Karamitopoulou E, Vavinskaya V, Wascher A, Lowy AM, Schürch CM, Puri PL, Bruneau BG, Hargreaves DC, Reya T. PMID: 36653361; PMCID: PMC9849267.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimals
    10. Transcription Factor GATA4 Regulates Cell Type-Specific Splicing Through Direct Interaction With RNA in Human Induced Pluripotent Stem Cell-Derived Cardiac Progenitors. Circulation. 2022 09 06; 146(10):770-787. Zhu L, Choudhary K, Gonzalez-Teran B, Ang YS, Thomas R, Stone NR, Liu L, Zhou P, Zhu C, Ruan H, Huang Y, Jin S, Pelonero A, Koback F, Padmanabhan A, Sadagopan N, Hsu A, Costa MW, Gifford CA, van Bemmel JG, Hüttenhain R, Vedantham V, Conklin BR, Black BL, Bruneau BG, Steinmetz L, Krogan NJ, Pollard KS, Srivastava D. PMID: 35938400; PMCID: PMC9452483.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    11. Cell Layers: uncovering clustering structure in unsupervised single-cell transcriptomic analysis. Bioinform Adv. 2022; 2(1):vbac051. Blair AP, Hu RK, Farah EN, Chi NC, Pollard KS, Przytycki PF, Kathiriya IS, Bruneau BG. PMID: 35967929; PMCID: PMC9362878.
      View in: PubMed   Mentions:
    12. Targeting transcription in heart failure via CDK7/12/13 inhibition. Nat Commun. 2022 07 27; 13(1):4345. Hsu A, Duan Q, Day DS, Luo X, McMahon S, Huang Y, Feldman ZB, Jiang Z, Zhang T, Liang Y, Alexanian M, Padmanabhan A, Brown JD, Lin CY, Gray NS, Young RA, Bruneau BG, Haldar SM. PMID: 35896549; PMCID: PMC9329381.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    13. Modeling congenital heart disease: lessons from mice, hPSC-based models, and organoids. Genes Dev. 2022 06 01; 36(11-12):652-663. Rao KS, Kameswaran V, Bruneau BG. PMID: 35835508; PMCID: PMC9296004.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimals
    14. Transcription factor protein interactomes reveal genetic determinants in heart disease. Cell. 2022 03 03; 185(5):794-814.e30. Gonzalez-Teran B, Pittman M, Felix F, Thomas R, Richmond-Buccola D, Hüttenhain R, Choudhary K, Moroni E, Costa MW, Huang Y, Padmanabhan A, Alexanian M, Lee CY, Maven BEJ, Samse-Knapp K, Morton SU, McGregor M, Gifford CA, Seidman JG, Seidman CE, Gelb BD, Colombo G, Conklin BR, Black BL, Bruneau BG, Krogan NJ, Pollard KS, Srivastava D. PMID: 35182466; PMCID: PMC8923057.
      View in: PubMed   Mentions: 13     Fields:    Translation:Animals
    15. Brahma safeguards canalization of cardiac mesoderm differentiation. Nature. 2022 02; 602(7895):129-134. Hota SK, Rao KS, Blair AP, Khalilimeybodi A, Hu KM, Thomas R, So K, Kameswaran V, Xu J, Polacco BJ, Desai RV, Chatterjee N, Hsu A, Muncie JM, Blotnick AM, Winchester SAB, Weinberger LS, Hüttenhain R, Kathiriya IS, Krogan NJ, Saucerman JJ, Bruneau BG. PMID: 35082446; PMCID: PMC9196993.
      View in: PubMed   Mentions: 14     Fields:    Translation:AnimalsCells
    16. Co-emergence of cardiac and gut tissues promotes cardiomyocyte maturation within human iPSC-derived organoids. Cell Stem Cell. 2021 12 02; 28(12):2137-2152.e6. Silva AC, Matthys OB, Joy DA, Kauss MA, Natarajan V, Lai MH, Turaga D, Blair AP, Alexanian M, Bruneau BG, McDevitt TC. PMID: 34861147.
      View in: PubMed   Mentions: 48     Fields:    Translation:HumansCells
    17. Dissecting CTCF site function in a tense HoxD locus. Genes Dev. 2021 11 01; 35(21-22):1401-1402. Bruneau BG. PMID: 34725128; PMCID: PMC8559678.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    18. Mechanisms of Congenital Heart Disease Caused by NAA15 Haploinsufficiency. Circ Res. 2021 04 16; 128(8):1156-1169. Ward T, Tai W, Morton S, Impens F, Van Damme P, Van Haver D, Timmerman E, Venturini G, Zhang K, Jang MY, Willcox JAL, Haghighi A, Gelb BD, Chung WK, Goldmuntz E, Porter GA, Lifton RP, Brueckner M, Yost HJ, Bruneau BG, Gorham J, Kim Y, Pereira A, Homsy J, Benson CC, DePalma SR, Varland S, Chen CS, Arnesen T, Gevaert K, Seidman C, Seidman JG. PMID: 33557580; PMCID: PMC8048381.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansCellsCTClinical Trials
    19. WAPL maintains a cohesin loading cycle to preserve cell-type-specific distal gene regulation. Nat Genet. 2021 01; 53(1):100-109. Liu NQ, Maresca M, van den Brand T, Braccioli L, Schijns MMGA, Teunissen H, Bruneau BG, Nora EP, de Wit E. PMID: 33318687; PMCID: PMC7610352.
      View in: PubMed   Mentions: 44     Fields:    Translation:AnimalsCells
    20. Modeling Human TBX5 Haploinsufficiency Predicts Regulatory Networks for Congenital Heart Disease. Dev Cell. 2021 02 08; 56(3):292-309.e9. Kathiriya IS, Rao KS, Iacono G, Devine WP, Blair AP, Hota SK, Lai MH, Garay BI, Thomas R, Gong HZ, Wasson LK, Goyal P, Sukonnik T, Hu KM, Akgun GA, Bernard LD, Akerberg BN, Gu F, Li K, Speir ML, Haeussler M, Pu WT, Stuart JM, Seidman CE, Seidman JG, Heyn H, Bruneau BG. PMID: 33321106; PMCID: PMC7878434.
      View in: PubMed   Mentions: 39     Fields:    Translation:HumansAnimalsCells
    21. Molecular basis of CTCF binding polarity in genome folding. Nat Commun. 2020 11 05; 11(1):5612. Nora EP, Caccianini L, Fudenberg G, So K, Kameswaran V, Nagle A, Uebersohn A, Hajj B, Saux AL, Coulon A, Mirny LA, Pollard KS, Dahan M, Bruneau BG. PMID: 33154377; PMCID: PMC7645679.
      View in: PubMed   Mentions: 44     Fields:    Translation:AnimalsCells
    22. The developing heart: from The Wizard of Oz to congenital heart disease. Development. 2020 10 21; 147(21). Bruneau BG. PMID: 33087326; PMCID: PMC7595695.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansAnimalsCells
    23. Regulation of single-cell genome organization into TADs and chromatin nanodomains. Nat Genet. 2020 11; 52(11):1151-1157. Szabo Q, Donjon A, Jerkovic I, Papadopoulos GL, Cheutin T, Bonev B, Nora EP, Bruneau BG, Bantignies F, Cavalli G. PMID: 33077913; PMCID: PMC7610512.
      View in: PubMed   Mentions: 64     Fields:    Translation:AnimalsCells
    24. Author Correction: Transcriptional profiling and therapeutic targeting of oxidative stress in neuroinflammation. Nat Immunol. 2020 Sep; 21(9):1135. Mendiola AS, Ryu JK, Bardehle S, Meyer-Franke A, Ang KK, Wilson C, Baeten KM, Hanspers K, Merlini M, Thomas S, Petersen MA, Williams A, Thomas R, Rafalski VA, Meza-Acevedo R, Tognatta R, Yan Z, Pfaff SJ, Machado MR, Bedard C, Coronado PER, Jiang X, Wang J, Pleiss MA, Green AJ, Zamvil SS, Pico AR, Bruneau BG, Arkin MR, Akassoglou K. PMID: 32661365.
      View in: PubMed   Mentions: 2     Fields:    
    25. Author Correction: Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation. Genome Biol. 2020 Jun 02; 21(1):133. Nishana M, Ha C, Rodriguez-Hernaez J, Ranjbaran A, Chio E, Nora EP, Badri SB, Kloetgen A, Bruneau BG, Tsirigos A, Skok JA. PMID: 32487268; PMCID: PMC7265643.
      View in: PubMed   Mentions: 2     Fields:    
    26. Salt-inducible kinase 1 maintains HDAC7 stability to promote pathologic cardiac remodeling. J Clin Invest. 2020 06 01; 130(6):2966-2977. Hsu A, Duan Q, McMahon S, Huang Y, Wood SA, Gray NS, Wang B, Bruneau BG, Haldar SM. PMID: 32106109; PMCID: PMC7259992.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansAnimalsCells
    27. Cardiac natriuretic peptides. Nat Rev Cardiol. 2020 11; 17(11):698-717. Goetze JP, Bruneau BG, Ramos HR, Ogawa T, de Bold MK, de Bold AJ. PMID: 32444692.
      View in: PubMed   Mentions: 166     Fields:    Translation:HumansAnimalsCells
    28. Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation. Genome Biol. 2020 05 11; 21(1):108. Nishana M, Ha C, Rodriguez-Hernaez J, Ranjbaran A, Chio E, Nora EP, Badri SB, Kloetgen A, Bruneau BG, Tsirigos A, Skok JA. PMID: 32393311; PMCID: PMC7212617.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansAnimalsCells
    29. Transcriptional profiling and therapeutic targeting of oxidative stress in neuroinflammation. Nat Immunol. 2020 05; 21(5):513-524. Mendiola AS, Ryu JK, Bardehle S, Meyer-Franke A, Ang KK, Wilson C, Baeten KM, Hanspers K, Merlini M, Thomas S, Petersen MA, Williams A, Thomas R, Rafalski VA, Meza-Acevedo R, Tognatta R, Yan Z, Pfaff SJ, Machado MR, Bedard C, Rios Coronado PE, Jiang X, Wang J, Pleiss MA, Green AJ, Zamvil SS, Pico AR, Bruneau BG, Arkin MR, Akassoglou K. PMID: 32284594; PMCID: PMC7523413.
      View in: PubMed   Mentions: 69     Fields:    Translation:HumansAnimalsCells
    30. Minimal in vivo requirements for developmentally regulated cardiac long intergenic non-coding RNAs. Development. 2019 12 09; 146(23). George MR, Duan Q, Nagle A, Kathiriya IS, Huang Y, Rao K, Haldar SM, Bruneau BG. PMID: 31784461; PMCID: PMC6918742.
      View in: PubMed   Mentions: 17     Fields:    Translation:Animals
    31. Chromatin and epigenetics in development: a Special Issue. Development. 2019 10 10; 146(19). Bruneau BG, Koseki H, Strome S, Torres-Padilla ME. PMID: 31601561.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    32. CTCF confers local nucleosome resiliency after DNA replication and during mitosis. Elife. 2019 10 10; 8. Owens N, Papadopoulou T, Festuccia N, Tachtsidi A, Gonzalez I, Dubois A, Vandormael-Pournin S, Nora EP, Bruneau BG, Cohen-Tannoudji M, Navarro P. PMID: 31599722; PMCID: PMC6844645.
      View in: PubMed   Mentions: 35     Fields:    Translation:AnimalsCells
    33. RNA Interactions Are Essential for CTCF-Mediated Genome Organization. Mol Cell. 2019 11 07; 76(3):412-422.e5. Saldaña-Meyer R, Rodriguez-Hernaez J, Escobar T, Nishana M, Jácome-López K, Nora EP, Bruneau BG, Tsirigos A, Furlan-Magaril M, Skok J, Reinberg D. PMID: 31522988; PMCID: PMC7195841.
      View in: PubMed   Mentions: 122     Fields:    Translation:AnimalsCells
    34. Genome of the Komodo dragon reveals adaptations in the cardiovascular and chemosensory systems of monitor lizards. Nat Ecol Evol. 2019 08; 3(8):1241-1252. Lind AL, Lai YYY, Mostovoy Y, Holloway AK, Iannucci A, Mak ACY, Fondi M, Orlandini V, Eckalbar WL, Milan M, Rovatsos M, Kichigin IG, Makunin AI, Johnson Pokorná M, Altmanová M, Trifonov VA, Schijlen E, Kratochvíl L, Fani R, Velenský P, Rehák I, Patarnello T, Jessop TS, Hicks JW, Ryder OA, Mendelson JR, Ciofi C, Kwok PY, Pollard KS, Bruneau BG. PMID: 31358948; PMCID: PMC6668926.
      View in: PubMed   Mentions: 34     Fields:    Translation:AnimalsCells
    35. Dynamic BAF chromatin remodeling complex subunit inclusion promotes temporally distinct gene expression programs in cardiogenesis. Development. 2019 07 05; 146(19). Hota SK, Johnson JR, Verschueren E, Thomas R, Blotnick AM, Zhu Y, Sun X, Pennacchio LA, Krogan NJ, Bruneau BG. PMID: 30814119; PMCID: PMC6803373.
      View in: PubMed   Mentions: 26     Fields:    Translation:AnimalsCells
    36. A De Novo Shape Motif Discovery Algorithm Reveals Preferences of Transcription Factors for DNA Shape Beyond Sequence Motifs. Cell Syst. 2019 01 23; 8(1):27-42.e6. Samee MAH, Bruneau BG, Pollard KS. PMID: 30660610; PMCID: PMC6368855.
      View in: PubMed   Mentions: 27     Fields:    Translation:HumansCells
    37. Identifying cis Elements for Spatiotemporal Control of Mammalian DNA Replication. Cell. 2019 02 07; 176(4):816-830.e18. Sima J, Chakraborty A, Dileep V, Michalski M, Klein KN, Holcomb NP, Turner JL, Paulsen MT, Rivera-Mulia JC, Trevilla-Garcia C, Bartlett DA, Zhao PA, Washburn BK, Nora EP, Kraft K, Mundlos S, Bruneau BG, Ljungman M, Fraser P, Ay F, Gilbert DM. PMID: 30595451; PMCID: PMC6546437.
      View in: PubMed   Mentions: 75     Fields:    Translation:AnimalsCells
    38. Heart enhancers with deeply conserved regulatory activity are established early in zebrafish development. Nat Commun. 2018 11 26; 9(1):4977. Yuan X, Song M, Devine P, Bruneau BG, Scott IC, Wilson MD. PMID: 30478328; PMCID: PMC6255839.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansAnimalsCells
    39. Chromatin Domains Go on Repeat in Disease. Cell. 2018 09 20; 175(1):38-40. Bruneau BG, Nora EP. PMID: 30241613.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    40. A novel reporter allele for monitoring Dll4 expression within the embryonic and adult mouse. Biol Open. 2018 Mar 12; 7(3). Herman AM, Rhyner AM, Devine WP, Marrelli SP, Bruneau BG, Wythe JD. PMID: 29437553; PMCID: PMC5898260.
      View in: PubMed   Mentions: 6     Fields:    
    41. Cardiac-enriched BAF chromatin-remodeling complex subunit Baf60c regulates gene expression programs essential for heart development and function. Biol Open. 2018 Jan 05; 7(1). Sun X, Hota SK, Zhou YQ, Novak S, Miguel-Perez D, Christodoulou D, Seidman CE, Seidman JG, Gregorio CC, Henkelman RM, Rossant J, Bruneau BG. PMID: 29183906; PMCID: PMC5829499.
      View in: PubMed   Mentions: 25     Fields:    
    42. Targeted Degradation of CTCF Decouples Local Insulation of Chromosome Domains from Genomic Compartmentalization. Cell. 2017 May 18; 169(5):930-944.e22. Nora EP, Goloborodko A, Valton AL, Gibcus JH, Uebersohn A, Abdennur N, Dekker J, Mirny LA, Bruneau BG. PMID: 28525758; PMCID: PMC5538188.
      View in: PubMed   Mentions: 675     Fields:    Translation:AnimalsCells
    43. Cooperative activation of cardiac transcription through myocardin bridging of paired MEF2 sites. Development. 2017 04 01; 144(7):1235-1241. Anderson CM, Hu J, Thomas R, Gainous TB, Celona B, Sinha T, Dickel DE, Heidt AB, Xu SM, Bruneau BG, Pollard KS, Pennacchio LA, Black BL. PMID: 28351867; PMCID: PMC5399617.
      View in: PubMed   Mentions: 7     Fields:    Translation:AnimalsCells
    44. Single-Cell Resolution of Temporal Gene Expression during Heart Development. Dev Cell. 2016 11 21; 39(4):480-490. DeLaughter DM, Bick AG, Wakimoto H, McKean D, Gorham JM, Kathiriya IS, Hinson JT, Homsy J, Gray J, Pu W, Bruneau BG, Seidman JG, Seidman CE. PMID: 27840107; PMCID: PMC5198784.
      View in: PubMed   Mentions: 214     Fields:    Translation:HumansAnimalsCells
    45. ATP-dependent chromatin remodeling during mammalian development. Development. 2016 08 15; 143(16):2882-97. Hota SK, Bruneau BG. PMID: 27531948; PMCID: PMC5004879.
      View in: PubMed   Mentions: 118     Fields:    Translation:HumansAnimalsCells
    46. Loss of Iroquois homeobox transcription factors 3 and 5 in osteoblasts disrupts cranial mineralization. Bone Rep. 2016 Dec; 5:86-95. Cain CJ, Gaborit N, Lwin W, Barruet E, Ho S, Bonnard C, Hamamy H, Shboul M, Reversade B, Kayserili H, Bruneau BG, Hsiao EC. PMID: 27453922; PMCID: PMC4926823.
      View in: PubMed   Mentions: 14  
    47. Expandable Cardiovascular Progenitor Cells Reprogrammed from Fibroblasts. Cell Stem Cell. 2016 Mar 03; 18(3):368-81. Zhang Y, Cao N, Huang Y, Spencer CI, Fu JD, Yu C, Liu K, Nie B, Xu T, Li K, Xu S, Bruneau BG, Srivastava D, Ding S. PMID: 26942852; PMCID: PMC5826660.
      View in: PubMed   Mentions: 66     Fields:    Translation:AnimalsCells
    48. KMT2D regulates specific programs in heart development via histone H3 lysine 4 di-methylation. Development. 2016 Mar 01; 143(5):810-21. Ang SY, Uebersohn A, Spencer CI, Huang Y, Lee JE, Ge K, Bruneau BG. PMID: 26932671; PMCID: PMC4813342.
      View in: PubMed   Mentions: 61     Fields:    Translation:AnimalsCells
    49. Complex Interdependence Regulates Heterotypic Transcription Factor Distribution and Coordinates Cardiogenesis. Cell. 2016 Feb 25; 164(5):999-1014. Luna-Zurita L, Stirnimann CU, Glatt S, Kaynak BL, Thomas S, Baudin F, Samee MA, He D, Small EM, Mileikovsky M, Nagy A, Holloway AK, Pollard KS, Müller CW, Bruneau BG. PMID: 26875865; PMCID: PMC4769693.
      View in: PubMed   Mentions: 98     Fields:    Translation:AnimalsCells
    50. Accelerated Evolution of Enhancer Hotspots in the Mammal Ancestor. Mol Biol Evol. 2016 Apr; 33(4):1008-18. Holloway AK, Bruneau BG, Sukonnik T, Rubenstein JL, Pollard KS. PMID: 26715627; PMCID: PMC4776709.
      View in: PubMed   Mentions: 14     Fields:    Translation:AnimalsCells
    51. Polycomb Regulates Mesoderm Cell Fate-Specification in Embryonic Stem Cells through Activation and Repression Mechanisms. Cell Stem Cell. 2015 Sep 03; 17(3):300-15. Morey L, Santanach A, Blanco E, Aloia L, Nora EP, Bruneau BG, Di Croce L. PMID: 26340528.
      View in: PubMed   Mentions: 76     Fields:    Translation:AnimalsCells
    52. Brg1 modulates enhancer activation in mesoderm lineage commitment. Development. 2015 Apr 15; 142(8):1418-30. Alexander JM, Hota SK, He D, Thomas S, Ho L, Pennacchio LA, Bruneau BG. PMID: 25813539; PMCID: PMC4392595.
      View in: PubMed   Mentions: 58     Fields:    Translation:HumansCells
    53. Human disease modeling reveals integrated transcriptional and epigenetic mechanisms of NOTCH1 haploinsufficiency. Cell. 2015 Mar 12; 160(6):1072-86. Theodoris CV, Li M, White MP, Liu L, He D, Pollard KS, Bruneau BG, Srivastava D. PMID: 25768904; PMCID: PMC4359747.
      View in: PubMed   Mentions: 97     Fields:    Translation:HumansCells
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    120. Lats2/Kpm is required for embryonic development, proliferation control and genomic integrity. EMBO J. 2004 Sep 15; 23(18):3677-88. McPherson JP, Tamblyn L, Elia A, Migon E, Shehabeldin A, Matysiak-Zablocki E, Lemmers B, Salmena L, Hakem A, Fish J, Kassam F, Squire J, Bruneau BG, Hande MP, Hakem R. PMID: 15343267; PMCID: PMC517611.
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    124. The Iroquois homeobox gene Irx2 is not essential for normal development of the heart and midbrain-hindbrain boundary in mice. Mol Cell Biol. 2003 Nov; 23(22):8216-25. Lebel M, Agarwal P, Cheng CW, Kabir MG, Chan TY, Thanabalasingham V, Zhang X, Cohen DR, Husain M, Cheng SH, Bruneau BG, Hui CC. PMID: 14585979; PMCID: PMC262378.
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    125. Cardiac T-box factor Tbx20 directly interacts with Nkx2-5, GATA4, and GATA5 in regulation of gene expression in the developing heart. Dev Biol. 2003 Oct 15; 262(2):206-24. Stennard FA, Costa MW, Elliott DA, Rankin S, Haast SJ, Lai D, McDonald LP, Niederreither K, Dolle P, Bruneau BG, Zorn AM, Harvey RP. PMID: 14550786.
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    126. Tbx5 is required for forelimb bud formation and continued outgrowth. Development. 2003 Jun; 130(12):2741-51. Rallis C, Bruneau BG, Del Buono J, Seidman CE, Seidman JG, Nissim S, Tabin CJ, Logan MP. PMID: 12736217.
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    127. The developing heart and congenital heart defects: a make or break situation. Clin Genet. 2003 Apr; 63(4):252-61. Bruneau BG. PMID: 12702154.
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    128. Tbx5 is essential for forelimb bud initiation following patterning of the limb field in the mouse embryo. Development. 2003 Feb; 130(3):623-33. Agarwal P, Wylie JN, Galceran J, Arkhitko O, Li C, Deng C, Grosschedl R, Bruneau BG. PMID: 12490567.
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    129. Transcriptional regulation of vertebrate cardiac morphogenesis. Circ Res. 2002 Mar 22; 90(5):509-19. Bruneau BG. PMID: 11909814.
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    131. Cardiomyopathy in Irx4-deficient mice is preceded by abnormal ventricular gene expression. Mol Cell Biol. 2001 Mar; 21(5):1730-6. Bruneau BG, Bao ZZ, Fatkin D, Xavier-Neto J, Georgakopoulos D, Maguire CT, Berul CI, Kass DA, Kuroski-de Bold ML, de Bold AJ, Conner DA, Rosenthal N, Cepko CL, Seidman CE, Seidman JG. PMID: 11238910; PMCID: PMC86719.
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    132. Cardiac expression of the ventricle-specific homeobox gene Irx4 is modulated by Nkx2-5 and dHand. Dev Biol. 2000 Jan 15; 217(2):266-77. Bruneau BG, Bao ZZ, Tanaka M, Schott JJ, Izumo S, Cepko CL, Seidman JG, Seidman CE. PMID: 10625552.
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    136. BNP gene expression is specifically modulated by stretch and ET-1 in a new model of isolated rat atria. Am J Physiol. 1997 12; 273(6):H2678-86. Bruneau BG, Piazza LA, de Bold AJ. PMID: 9435604.
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    137. Tissue-specific regulation of renal and cardiac atrial natriuretic factor gene expression in deoxycorticosterone acetate-salt rats. Hypertension. 1997 Dec; 30(6):1342-7. Ogawa T, Bruneau BG, Yokota N, de Bold ML, de Bold AJ. PMID: 9403551.
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    138. Mutations in human TBX3 alter limb, apocrine and genital development in ulnar-mammary syndrome. Nat Genet. 1997 Jul; 16(3):311-5. Bamshad M, Lin RC, Law DJ, Watkins WC, Krakowiak PA, Moore ME, Franceschini P, Lala R, Holmes LB, Gebuhr TC, Bruneau BG, Schinzel A, Seidman JG, Seidman CE, Jorde LB. PMID: 9207801.
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    140. Alpha 1-adrenergic stimulation of isolated rat atria results in discoordinate increases in natriuretic peptide secretion and gene expression and enhances Egr-1 and c-Myc expression. Endocrinology. 1996 Jan; 137(1):137-43. Bruneau BG, Piazza LA, de Bold AJ. PMID: 8536605.
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    141. Mechanical and neuroendocrine regulation of the endocrine heart. Cardiovasc Res. 1996 Jan; 31(1):7-18. de Bold AJ, Bruneau BG, Kuroski de Bold ML. PMID: 8849584.
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    142. Dissociation of cardiac hypertrophy, myosin heavy chain isoform expression, and natriuretic peptide production in DOCA-salt rats. Am J Hypertens. 1995 Mar; 8(3):301-10. Yokota N, Bruneau BG, Fernandez BE, de Bold ML, Piazza LA, Eid H, de Bold AJ. PMID: 7540847.
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    143. Atrial natriuretic factor significantly contributes to the mineralocorticoid escape phenomenon. Evidence for a guanylate cyclase-mediated pathway. J Clin Invest. 1994 Nov; 94(5):1938-46. Yokota N, Bruneau BG, Kuroski de Bold ML, de Bold AJ. PMID: 7962539; PMCID: PMC294607.
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    144. Selective changes in natriuretic peptide and early response gene expression in isolated rat atria following stimulation by stretch or endothelin-1. Cardiovasc Res. 1994 Oct; 28(10):1519-25. Bruneau BG, de Bold AJ. PMID: 8001040.
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